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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
83 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180831051
ODKB01031864
243647
Bacillota
TTT
Lys
>WENV180830085
ODKB01000339
339630
Bacillota
GCC
Gly
>WENV180830343
ODKB01001990
339630
Bacillota
GCC
Gly
>WENV180830160
ODKB01000620
16842
Bacillota
CGA
Ser
>WENV180830359
ODKB01002106
16842
Bacillota
CGA
Ser
>WENV180831410
ODKB01151400
342730
Bacillota
CTC
Glu
>WENV180830957
ODKB01022122
235693
Bacillota
GGT
Thr
>WENV180831384
ODKB01134108
235693
Bacillota
GGT
Thr
>WENV180831091
ODKB01038241
246392
Bacillota
GTT
Asn
>WENV180831454
ODKB01208823
338152
Bacillota
TTC
Glu
>WENV180831254
ODKB01071733
147691
Bacillota
GAT
Ile
>WENV180830678
ODKB01009271
411591
Bacillota
GGT
Thr
>WENV180831232
ODKB01064077
239080
Bacillota
CTG
Gln
>WENV180831306
ODKB01085848
243119
Bacillota
CTT
Lys
>WENV180830967
ODKB01023125
243119
Bacillota
CTT
Lys
>WENV180830253
ODKB01001263
243119
Bacillota
CTT
Lys
>WENV180831438
ODKB01187585
235150
Bacillota
TGC
Ala
>WENV180830809
ODKB01013907
152047
Bacillota
GGG
Pro
>WENV180831185
ODKB01052503
413601
Bacillota
GCA
Cys
>WENV180831327
ODKB01097853
235137
Bacillota
TGC
Ala
>WENV180831242
ODKB01065304
241761
Bacillota
TAC
Val
>WENV180831479
ODKB01227935
16834
Bacillota
GCT
Ser
>WENV180830621
ODKB01007418
16834
Bacillota
GCT
Ser
>WENV180830431
ODKB01003199
16834
Bacillota
GCT
Ser
>WENV180830571
ODKB01006061
243646
Bacillota
GTT
Asn
>WENV180830138
ODKB01000537
243646
Bacillota
GTT
Asn
>WENV180830371
ODKB01002321
114002
Bacillota
CAA
Leu
>WENV180830231
ODKB01000991
114002
Bacillota
CAA
Leu
>WENV180831474
ODKB01226632
37437
Bacillota
TAA
Leu
>WENV180830127
ODKB01000474
37437
Bacillota
TAA
Leu
>WENV180831043
ODKB01031364
144763
Bacillota
TGG
Pro
>WENV180830015
ODKB01000178
144763
Bacillota
TGG
Pro
>WENV180830388
ODKB01002419
113951
Bacillota
GTA
Tyr
>WENV180830280
ODKB01001395
113951
Bacillota
GTA
Tyr
>WENV180830573
ODKB01006061
243612
Bacillota
TAC
Val
>WENV180830140
ODKB01000537
243612
Bacillota
TAC
Val
>WENV180831307
ODKB01085848
144766
Bacillota
CAT
Met
>WENV180830252
ODKB01001263
144766
Bacillota
CAT
Met
>WENV180831284
ODKB01078345
155089
Bacillota
CAT
Met
>WENV180831110
ODKB01039246
37551
Bacillota
CGA
Ser
>WENV180831045
ODKB01031364
411585
Bacillota
GCA
Cys
>WENV180830254
ODKB01001263
411585
Bacillota
GCA
Cys
>WENV180831192
ODKB01054045
147135
Bacillota
ACG
Arg
>WENV180831138
ODKB01043125
148268
Bacillota
CGG
Pro
>WENV180830386
ODKB01002419
242848
Bacillota
GAA
Phe
>WENV180830178
ODKB01000697
242848
Bacillota
GAA
Phe
>WENV180830770
ODKB01012628
342895
Bacillota
CAT
Met
>WENV180830319
ODKB01001674
411584
Bacillota
TCC
Gly
>WENV180831428
ODKB01169408
236044
Bacillota
CAT
Met
>WENV180831143
ODKB01044116
243399
Bacillota
CCA
Trp
>WENV180830008
ODKB01000178
341777
Bacillota
TTC
Glu
>WENV180831486
ODKB01237046
241471
Bacillota
TGC
Ala
>WENV180831413
ODKB01154353
241471
Bacillota
TGC
Ala
>WENV180831372
ODKB01128214
241471
Bacillota
TGC
Ala
>WENV180830381
ODKB01002419
148057
Bacillota
CAT
Met
>WENV180831136
ODKB01042667
147717
Bacillota
TGG
Pro
>WENV180831042
ODKB01031364
144962
Bacillota
CAT
Met
>WENV180830710
ODKB01010184
235701
Bacillota
TTT
Lys
>WENV180831197
ODKB01055084
154711
Bacillota
TGG
Pro
>WENV180831274
ODKB01076483
237846
Bacillota
GCC
Gly
>WENV180830911
ODKB01020119
235197
Bacillota
GTC
Asp
>WENV180830123
ODKB01000474
235197
Bacillota
GTC
Asp
>WENV180830189
ODKB01000769
342061
Bacillota
GCA
Cys
>WENV180831144
ODKB01044116
152051
Bacillota
ACG
Arg
>WENV180830009
ODKB01000178
235288
Bacillota
TAC
Val
>WENV180831356
ODKB01114097
241526
Bacillota
CTT
Lys
>WENV180830716
ODKB01010386
235807
Bacillota
CAT
Met
>WENV180830406
ODKB01002757
147183
Bacillota
GTT
Asn
>WENV180830277
ODKB01001395
147183
Bacillota
GTT
Asn
>WENV180830005
ODKB01000174
147183
Bacillota
GTT
Asn
>WENV180830708
ODKB01010184
243613
Bacillota
GTG
His
>WENV180831049
ODKB01031864
243613
Bacillota
GTG
His
>WENV180830510
ODKB01004708
148495
Bacillota
TCT
Arg
>WENV180830958
ODKB01022122
152491
Bacillota
CAT
Met
>WENV180831281
ODKB01077763
144762
Bacillota
TCT
Arg
>WENV180830724
ODKB01010386
237681
Bacillota
GTC
Asp
>WENV180830717
ODKB01010386
237681
Bacillota
GTC
Asp
>WENV180830628
ODKB01007558
413657
Bacillota
CCC
Gly
>WENV180831429
ODKB01169548
238945
Bacillota
GCC
Gly
>WENV180831196
ODKB01055084
238857
Bacillota
CCA
Trp
>WENV180831050
ODKB01031864
343027
Bacillota
TTG
Gln
>WENV180830709
ODKB01010184
343027
Bacillota
TTG
Gln
>WENV180830185
ODKB01000746
151836
Bacillota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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