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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
95 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180890373
ODMO01001369
243647
Bacillota
TTT
Lys
>WENV180891090
ODMO01051156
243647
Bacillota
TTT
Lys
>WENV180891307
ODMO01148482
243647
Bacillota
TTT
Lys
>WENV180891008
ODMO01035723
178679
Bacillota
CAT
Met
>WENV180890297
ODMO01000673
16842
Bacillota
CGA
Ser
>WENV180890304
ODMO01000698
16842
Bacillota
CGA
Ser
>WENV180890835
ODMO01018338
37213
Bacillota
TGA
Ser
>WENV180890339
ODMO01001001
267649
Bacillota
TAC
Val
>WENV180890387
ODMO01001591
267649
Bacillota
TAC
Val
>WENV180890814
ODMO01016667
246392
Bacillota
GTT
Asn
>WENV180890528
ODMO01003899
338227
Bacillota
CCT
Arg
>WENV180891290
ODMO01142580
338152
Bacillota
TTC
Glu
>WENV180890939
ODMO01026798
148348
Bacillota
GTC
Asp
>WENV180890842
ODMO01018794
148348
Bacillota
GTC
Asp
>WENV180891016
ODMO01036160
389888
Bacillota
GCC
Gly
>WENV180890638
ODMO01007351
307003
Bacillota
TGC
Ala
>WENV180890634
ODMO01007180
307003
Bacillota
TGC
Ala
>WENV180890442
ODMO01002438
239080
Bacillota
CTG
Gln
>WENV180891041
ODMO01039253
235137
Bacillota
TGC
Ala
>WENV180891014
ODMO01036160
308424
Bacillota
TTT
Lys
>WENV180891301
ODMO01147620
391536
Bacillota
TTC
Glu
>WENV180891134
ODMO01061727
391536
Bacillota
TTC
Glu
>WENV180890822
ODMO01017019
391536
Bacillota
TTC
Glu
>WENV180890683
ODMO01008741
391536
Bacillota
TTC
Glu
>WENV180890673
ODMO01008392
391536
Bacillota
TTC
Glu
>WENV180890215
ODMO01000285
391536
Bacillota
TTC
Glu
>WENV180890731
ODMO01011473
241761
Bacillota
TAC
Val
>WENV180891193
ODMO01085846
16834
Bacillota
GCT
Ser
>WENV180890802
ODMO01016003
16834
Bacillota
GCT
Ser
>WENV180890614
ODMO01006829
16834
Bacillota
GCT
Ser
>WENV180890462
ODMO01002787
16834
Bacillota
GCT
Ser
>WENV180891269
ODMO01126950
243646
Bacillota
GTT
Asn
>WENV180891137
ODMO01061727
243646
Bacillota
GTT
Asn
>WENV180890372
ODMO01001369
243646
Bacillota
GTT
Asn
>WENV180890214
ODMO01000285
243646
Bacillota
GTT
Asn
>WENV180890968
ODMO01029362
114002
Bacillota
CAA
Leu
>WENV180890660
ODMO01007847
114002
Bacillota
CAA
Leu
>WENV180890821
ODMO01017019
296878
Bacillota
GTT
Asn
>WENV180890727
ODMO01011473
296878
Bacillota
GTT
Asn
>WENV180890672
ODMO01008392
296878
Bacillota
GTT
Asn
>WENV180891018
ODMO01036160
162028
Bacillota
ACG
Arg
>WENV180891221
ODMO01098338
113951
Bacillota
GTA
Tyr
>WENV180891302
ODMO01147620
243612
Bacillota
TAC
Val
>WENV180891135
ODMO01061727
243612
Bacillota
TAC
Val
>WENV180890823
ODMO01017019
243612
Bacillota
TAC
Val
>WENV180890684
ODMO01008741
243612
Bacillota
TAC
Val
>WENV180890674
ODMO01008392
243612
Bacillota
TAC
Val
>WENV180890216
ODMO01000285
243612
Bacillota
TAC
Val
>WENV180891093
ODMO01051476
199366
Bacillota
CAT
Met
>WENV180890600
ODMO01006584
81382
Bacillota
GAG
Leu
>WENV180890692
ODMO01009458
81373
Bacillota
GTA
Tyr
>WENV180890890
ODMO01022949
147135
Bacillota
ACG
Arg
>WENV180891138
ODMO01062031
148268
Bacillota
CGG
Pro
>WENV180891012
ODMO01035723
242848
Bacillota
GAA
Phe
>WENV180890314
ODMO01000812
194150
Bacillota
TGG
Pro
>WENV180891059
ODMO01045050
185292
Bacillota
ACG
Arg
>WENV180890784
ODMO01014023
96694
Bacillota
TAG
Leu
>WENV180890725
ODMO01011419
152045
Bacillota
CAT
Met
>WENV180891069
ODMO01046145
235701
Bacillota
TTT
Lys
>WENV180890975
ODMO01030816
154711
Bacillota
TGG
Pro
>WENV180890639
ODMO01007351
152019
Bacillota
GAT
Ile
>WENV180891048
ODMO01042313
152046
Bacillota
TCT
Arg
>WENV180890998
ODMO01033196
237846
Bacillota
GCC
Gly
>WENV180891311
ODMO01149555
235197
Bacillota
GTC
Asp
>WENV180890173
ODMO01000210
235197
Bacillota
GTC
Asp
>WENV180891268
ODMO01126950
368876
Bacillota
GCC
Gly
>WENV180891136
ODMO01061727
368876
Bacillota
GCC
Gly
>WENV180890671
ODMO01008392
368876
Bacillota
GCC
Gly
>WENV180890463
ODMO01002801
368876
Bacillota
GCC
Gly
>WENV180890371
ODMO01001369
368876
Bacillota
GCC
Gly
>WENV180890175
ODMO01000210
368876
Bacillota
GCC
Gly
>WENV180891158
ODMO01071725
152051
Bacillota
ACG
Arg
>WENV180891112
ODMO01054967
113225
Bacillota
TAG
Leu
>WENV180890669
ODMO01008352
241526
Bacillota
CTT
Lys
>WENV180890562
ODMO01005041
243613
Bacillota
GTG
His
>WENV180891171
ODMO01076955
144672
Bacillota
TCT
Arg
>WENV180890954
ODMO01027088
152491
Bacillota
CAT
Met
>WENV180890950
ODMO01027088
273029
Bacillota
TGT
Thr
>WENV180890953
ODMO01027088
281472
Bacillota
GGT
Thr
>WENV180890724
ODMO01011419
281472
Bacillota
GGT
Thr
>WENV180890316
ODMO01000812
178024
Bacillota
TCT
Arg
>WENV180890923
ODMO01025514
315448
Bacillota
GGT
Thr
>WENV180890856
ODMO01020095
315448
Bacillota
GGT
Thr
>WENV180891258
ODMO01121325
413657
Bacillota
CCC
Gly
>WENV180890992
ODMO01032754
413657
Bacillota
CCC
Gly
>WENV180890972
ODMO01030211
413657
Bacillota
CCC
Gly
>WENV180890467
ODMO01002853
272488
Bacillota
GAA
Phe
>WENV180890944
ODMO01026798
81598
Bacillota
CAG
Leu
>WENV180890726
ODMO01011473
384950
Bacillota
GCC
Gly
>WENV180890730
ODMO01011473
393635
Bacillota
TTC
Glu
>WENV180890984
ODMO01031064
287034
Bacillota
GTT
Asn
>WENV180890682
ODMO01008741
287034
Bacillota
GTT
Asn
>WENV180891284
ODMO01139001
413179
Bacillota
CCC
Gly
>WENV180890563
ODMO01005041
343027
Bacillota
TTG
Gln
>WENV180891192
ODMO01085132
151836
Bacillota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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