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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
104 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181045854
ODXW01002277
243647
Bacillota
TTT
Lys
>WENV181046215
ODXW01012440
243647
Bacillota
TTT
Lys
>WENV181046024
ODXW01005242
26899
Bacillota
GGA
Ser
>WENV181046046
ODXW01005609
339630
Bacillota
GCC
Gly
>WENV181045551
ODXW01000449
16842
Bacillota
CGA
Ser
>WENV181046221
ODXW01012756
16842
Bacillota
CGA
Ser
>WENV181046158
ODXW01010127
342730
Bacillota
CTC
Glu
>WENV181045773
ODXW01001521
235693
Bacillota
GGT
Thr
>WENV181046170
ODXW01010951
235693
Bacillota
GGT
Thr
>WENV181045941
ODXW01003581
267649
Bacillota
TAC
Val
>WENV181045901
ODXW01002827
267649
Bacillota
TAC
Val
>WENV181045308
ODXW01000057
267556
Bacillota
TAC
Val
>WENV181046384
ODXW01026393
246392
Bacillota
GTT
Asn
>WENV181046204
ODXW01012084
246392
Bacillota
GTT
Asn
>WENV181046248
ODXW01013794
338152
Bacillota
TTC
Glu
>WENV181045814
ODXW01001881
37549
Bacillota
TAA
Leu
>WENV181046274
ODXW01015090
148348
Bacillota
GTC
Asp
>WENV181046442
ODXW01035949
243099
Bacillota
GTT
Asn
>WENV181046269
ODXW01015090
243099
Bacillota
GTT
Asn
>WENV181045579
ODXW01000573
243119
Bacillota
CTT
Lys
>WENV181046446
ODXW01037290
235150
Bacillota
TGC
Ala
>WENV181046432
ODXW01034140
235150
Bacillota
TGC
Ala
>WENV181045507
ODXW01000335
152047
Bacillota
GGG
Pro
>WENV181045985
ODXW01004321
422863
Bacillota
GCA
Cys
>WENV181046501
ODXW01047287
235137
Bacillota
TGC
Ala
>WENV181046423
ODXW01031680
235137
Bacillota
TGC
Ala
>WENV181046311
ODXW01018176
235137
Bacillota
TGC
Ala
>WENV181046587
ODXW01085365
241761
Bacillota
TAC
Val
>WENV181046388
ODXW01026393
241761
Bacillota
TAC
Val
>WENV181046273
ODXW01015090
241761
Bacillota
TAC
Val
>WENV181046206
ODXW01012084
241761
Bacillota
TAC
Val
>WENV181045614
ODXW01000736
419288
Bacillota
GGT
Thr
>WENV181046174
ODXW01011095
16834
Bacillota
GCT
Ser
>WENV181045920
ODXW01003115
16834
Bacillota
GCT
Ser
>WENV181046406
ODXW01028752
268272
Bacillota
TGC
Ala
>WENV181046379
ODXW01026238
268272
Bacillota
TGC
Ala
>WENV181046134
ODXW01008927
268272
Bacillota
TGC
Ala
>WENV181046275
ODXW01015090
239076
Bacillota
GAA
Phe
>WENV181046603
ODXW01092361
243646
Bacillota
GTT
Asn
>WENV181045930
ODXW01003427
243646
Bacillota
GTT
Asn
>WENV181045853
ODXW01002277
243646
Bacillota
GTT
Asn
>WENV181045704
ODXW01001146
114002
Bacillota
CAA
Leu
>WENV181045736
ODXW01001331
342736
Bacillota
TTG
Gln
>WENV181046360
ODXW01024800
37437
Bacillota
TAA
Leu
>WENV181046344
ODXW01023415
37437
Bacillota
TAA
Leu
>WENV181046621
ODXW01101576
340265
Bacillota
GCC
Gly
>WENV181046522
ODXW01055137
340265
Bacillota
GCC
Gly
>WENV181046383
ODXW01026393
340265
Bacillota
GCC
Gly
>WENV181045812
ODXW01001881
340265
Bacillota
GCC
Gly
>WENV181046027
ODXW01005335
113951
Bacillota
GTA
Tyr
>WENV181045932
ODXW01003427
243612
Bacillota
TAC
Val
>WENV181045846
ODXW01002185
341796
Bacillota
CCG
Arg
>WENV181045935
ODXW01003469
81373
Bacillota
GTA
Tyr
>WENV181045789
ODXW01001680
81373
Bacillota
GTA
Tyr
>WENV181045787
ODXW01001680
81373
Bacillota
GTA
Tyr
>WENV181046506
ODXW01048960
147135
Bacillota
ACG
Arg
>WENV181046565
ODXW01074210
144599
Bacillota
GTC
Asp
>WENV181045566
ODXW01000492
148268
Bacillota
CGG
Pro
>WENV181045795
ODXW01001720
342895
Bacillota
CAT
Met
>WENV181046386
ODXW01026393
248683
Bacillota
TTT
Lys
>WENV181045737
ODXW01001331
248683
Bacillota
TTT
Lys
>WENV181045564
ODXW01000492
243399
Bacillota
CCA
Trp
>WENV181045539
ODXW01000414
18852
Bacillota
GCT
Ser
>WENV181045513
ODXW01000345
18852
Bacillota
GCT
Ser
>WENV181045417
ODXW01000214
18852
Bacillota
GCT
Ser
>WENV181045813
ODXW01001881
419945
Bacillota
GCA
Cys
>WENV181046427
ODXW01032948
241471
Bacillota
TGC
Ala
>WENV181046600
ODXW01092283
250349
Bacillota
GAA
Phe
>WENV181045859
ODXW01002303
250349
Bacillota
GAA
Phe
>WENV181045560
ODXW01000481
250349
Bacillota
GAA
Phe
>WENV181045199
ODXW01000021
145057
Bacillota
TGG
Pro
>WENV181045845
ODXW01002179
96694
Bacillota
TAG
Leu
>WENV181045774
ODXW01001521
152045
Bacillota
CAT
Met
>WENV181046503
ODXW01047801
235701
Bacillota
TTT
Lys
>WENV181046428
ODXW01032948
152019
Bacillota
GAT
Ile
>WENV181045803
ODXW01001759
152046
Bacillota
TCT
Arg
>WENV181046334
ODXW01021370
237846
Bacillota
GCC
Gly
>WENV181045765
ODXW01001486
237846
Bacillota
GCC
Gly
>WENV181045702
ODXW01001128
237846
Bacillota
GCC
Gly
>WENV181045656
ODXW01000914
237846
Bacillota
GCC
Gly
>WENV181045407
ODXW01000182
237846
Bacillota
GCC
Gly
>WENV181046599
ODXW01091449
235197
Bacillota
GTC
Asp
>WENV181045858
ODXW01002303
235197
Bacillota
GTC
Asp
>WENV181045559
ODXW01000481
235197
Bacillota
GTC
Asp
>WENV181045565
ODXW01000492
152051
Bacillota
ACG
Arg
>WENV181046279
ODXW01015090
84171
Bacillota
GAG
Leu
>WENV181046272
ODXW01015090
241526
Bacillota
CTT
Lys
>WENV181045937
ODXW01003469
241526
Bacillota
CTT
Lys
>WENV181046573
ODXW01075972
147183
Bacillota
GTT
Asn
>WENV181046043
ODXW01005609
157838
Bacillota
GTC
Asp
>WENV181046213
ODXW01012440
243613
Bacillota
GTG
His
>WENV181046574
ODXW01076269
347851
Bacillota
TTC
Glu
>WENV181045466
ODXW01000268
144672
Bacillota
TCT
Arg
>WENV181046129
ODXW01008542
127572
Bacillota
ACG
Arg
>WENV181046171
ODXW01010951
152491
Bacillota
CAT
Met
>WENV181045581
ODXW01000585
241638
Bacillota
GTG
His
>WENV181045608
ODXW01000680
178024
Bacillota
TCT
Arg
>WENV181046072
ODXW01006180
413657
Bacillota
CCC
Gly
>WENV181046006
ODXW01004879
152018
Bacillota
CCT
Arg
>WENV181046567
ODXW01074464
272488
Bacillota
GAA
Phe
>WENV181046545
ODXW01064230
81598
Bacillota
CAG
Leu
>WENV181045651
ODXW01000899
238945
Bacillota
GCC
Gly
>WENV181046328
ODXW01020673
413179
Bacillota
CCC
Gly
>WENV181046214
ODXW01012440
343027
Bacillota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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