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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
138 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181184134
OEJW01063517
24650
Bacillota
TAA
Leu
>WENV181184108
OEJW01057519
196621
Bacillota
GTC
Asp
>WENV181184135
OEJW01063767
196621
Bacillota
GTC
Asp
>WENV181184013
OEJW01030924
202812
Bacillota
CAT
Met
>WENV181183588
OEJW01001112
37213
Bacillota
TGA
Ser
>WENV181183685
OEJW01002678
144612
Bacillota
TCT
Arg
>WENV181183940
OEJW01020013
144612
Bacillota
TCT
Arg
>WENV181184175
OEJW01074741
144612
Bacillota
TCT
Arg
>WENV181183438
OEJW01000379
267649
Bacillota
TAC
Val
>WENV181183440
OEJW01000379
267649
Bacillota
TAC
Val
>WENV181184337
OEJW01156170
267649
Bacillota
TAC
Val
>WENV181183540
OEJW01000819
339890
Bacillota
TTG
Gln
>WENV181184343
OEJW01156508
235098
Bacillota
GAC
Val
>WENV181183912
OEJW01015861
235098
Bacillota
GAC
Val
>WENV181183776
OEJW01005482
235098
Bacillota
GAC
Val
>WENV181184173
OEJW01074089
23769
Bacillota
TAA
Leu
>WENV181183778
OEJW01005571
44854
Bacillota
TGA
Ser
>WENV181184066
OEJW01045945
144577
Bacillota
GAT
Ile
>WENV181183317
OEJW01000137
37071
Bacillota
TGA
Ser
>WENV181184354
OEJW01157475
304022
Bacillota
GCC
Gly
>WENV181184181
OEJW01077794
304022
Bacillota
GCC
Gly
>WENV181183600
OEJW01001215
304022
Bacillota
GCC
Gly
>WENV181183582
OEJW01001079
304022
Bacillota
GCC
Gly
>WENV181183557
OEJW01000960
304022
Bacillota
GCC
Gly
>WENV181183860
OEJW01012455
307003
Bacillota
TGC
Ala
>WENV181183694
OEJW01002737
59312
Bacillota
CAG
Leu
>WENV181183478
OEJW01000529
59312
Bacillota
CAG
Leu
>WENV181183921
OEJW01016982
238910
Bacillota
CTT
Lys
>WENV181183569
OEJW01001010
238910
Bacillota
CTT
Lys
>WENV181183486
OEJW01000569
238910
Bacillota
CTT
Lys
>WENV181183537
OEJW01000805
338147
Bacillota
CTC
Glu
>WENV181183428
OEJW01000324
338147
Bacillota
CTC
Glu
>WENV181183338
OEJW01000170
338147
Bacillota
CTC
Glu
>WENV181183894
OEJW01014601
235150
Bacillota
TGC
Ala
>WENV181184327
OEJW01155932
340802
Bacillota
TTG
Gln
>WENV181183791
OEJW01006536
338143
Bacillota
CTC
Glu
>WENV181183469
OEJW01000490
235114
Bacillota
TTT
Lys
>WENV181184147
OEJW01067225
144668
Bacillota
GTC
Asp
>WENV181183973
OEJW01022557
144668
Bacillota
GTC
Asp
>WENV181183712
OEJW01003229
429429
Bacillota
CCA
Trp
>WENV181184352
OEJW01157457
313454
Bacillota
GAA
Phe
>WENV181183788
OEJW01006374
313454
Bacillota
GAA
Phe
>WENV181184285
OEJW01131891
44859
Bacillota
AAG
Leu
>WENV181184223
OEJW01098041
11034
Bacillota
GGA
Ser
>WENV181184182
OEJW01077794
235117
Bacillota
TAC
Val
>WENV181183558
OEJW01000960
235117
Bacillota
TAC
Val
>WENV181184034
OEJW01037777
247057
Bacillota
TGC
Ala
>WENV181183308
OEJW01000129
274189
Bacillota
TGT
Thr
>WENV181184341
OEJW01156396
235079
Bacillota
GAA
Phe
>WENV181184184
OEJW01077794
235079
Bacillota
GAA
Phe
>WENV181184109
OEJW01057519
235079
Bacillota
GAA
Phe
>WENV181184086
OEJW01051282
235079
Bacillota
GAA
Phe
>WENV181183887
OEJW01014212
235079
Bacillota
GAA
Phe
>WENV181183740
OEJW01003986
235079
Bacillota
GAA
Phe
>WENV181183599
OEJW01001215
235079
Bacillota
GAA
Phe
>WENV181183560
OEJW01000960
235079
Bacillota
GAA
Phe
>WENV181183527
OEJW01000795
235079
Bacillota
GAA
Phe
>WENV181184065
OEJW01045945
235087
Bacillota
TGC
Ala
>WENV181183977
OEJW01022624
173314
Bacillota
GAT
Ile
>WENV181183714
OEJW01003235
173314
Bacillota
GAT
Ile
>WENV181184275
OEJW01127266
149041
Bacillota
GTC
Asp
>WENV181184123
OEJW01060994
338149
Bacillota
CTC
Glu
>WENV181183999
OEJW01026824
338149
Bacillota
CTC
Glu
>WENV181183851
OEJW01011318
338149
Bacillota
CTC
Glu
>WENV181183364
OEJW01000223
271471
Bacillota
GCC
Gly
>WENV181183293
OEJW01000104
271471
Bacillota
GCC
Gly
>WENV181183951
OEJW01020581
245298
Bacillota
CGG
Pro
>WENV181183757
OEJW01004586
37269
Bacillota
TGA
Ser
>WENV181183255
OEJW01000051
37269
Bacillota
TGA
Ser
>WENV181183995
OEJW01026073
287000
Bacillota
GTT
Asn
>WENV181183690
OEJW01002713
287000
Bacillota
GTT
Asn
>WENV181184322
OEJW01155873
169968
Bacillota
CAT
Met
>WENV181183711
OEJW01003225
396365
Bacillota
TTC
Glu
>WENV181184252
OEJW01114274
162445
Bacillota
CAT
Met
>WENV181184269
OEJW01123974
201704
Bacillota
GAT
Ile
>WENV181184111
OEJW01057716
152492
Bacillota
GGG
Pro
>WENV181184257
OEJW01117312
153911
Bacillota
GAT
Ile
>WENV181183467
OEJW01000490
144610
Bacillota
GTG
His
>WENV181184224
OEJW01098046
411547
Bacillota
CTG
Gln
>WENV181183779
OEJW01005571
4624
Bacillota
GCT
Ser
>WENV181183361
OEJW01000223
263765
Bacillota
TAC
Val
>WENV181183291
OEJW01000104
263765
Bacillota
TAC
Val
>WENV181183689
OEJW01002713
412387
Bacillota
GCA
Cys
>WENV181183474
OEJW01000516
412387
Bacillota
GCA
Cys
>WENV181184356
OEJW01157478
235095
Bacillota
GGT
Thr
>WENV181184056
OEJW01041527
419639
Bacillota
GCA
Cys
>WENV181183981
OEJW01023235
411549
Bacillota
TTG
Gln
>WENV181183507
OEJW01000665
235142
Bacillota
CTT
Lys
>WENV181183463
OEJW01000482
235142
Bacillota
CTT
Lys
>WENV181184355
OEJW01157477
148188
Bacillota
CCG
Arg
>WENV181184346
OEJW01157294
148188
Bacillota
CCG
Arg
>WENV181184345
OEJW01156678
148188
Bacillota
CCG
Arg
>WENV181184036
OEJW01037881
148188
Bacillota
CCG
Arg
>WENV181184113
OEJW01058104
298639
Bacillota
GTT
Asn
>WENV181184339
OEJW01156230
80612
Bacillota
GTA
Tyr
>WENV181183748
OEJW01004231
235127
Bacillota
TTT
Lys
>WENV181183731
OEJW01003832
235127
Bacillota
TTT
Lys
>WENV181183556
OEJW01000955
235127
Bacillota
TTT
Lys
>WENV181183541
OEJW01000819
235127
Bacillota
TTT
Lys
>WENV181184148
OEJW01067240
147674
Bacillota
TCT
Arg
>WENV181183538
OEJW01000819
147674
Bacillota
TCT
Arg
>WENV181184141
OEJW01066168
241432
Bacillota
TGT
Thr
>WENV181183808
OEJW01007655
235124
Bacillota
TGG
Pro
>WENV181183879
OEJW01013596
338129
Bacillota
TGT
Thr
>WENV181183679
OEJW01002459
157838
Bacillota
GTC
Asp
>WENV181183610
OEJW01001291
157838
Bacillota
GTC
Asp
>WENV181184212
OEJW01090834
144583
Bacillota
ACG
Arg
>WENV181184160
OEJW01070669
144583
Bacillota
ACG
Arg
>WENV181184298
OEJW01138779
320668
Bacillota
CTT
Lys
>WENV181183503
OEJW01000651
144672
Bacillota
TCT
Arg
>WENV181184338
OEJW01156227
144652
Bacillota
GTC
Asp
>WENV181183826
OEJW01008824
419877
Bacillota
TCC
Gly
>WENV181184021
OEJW01033840
235171
Bacillota
CCA
Trp
>WENV181184296
OEJW01136275
238974
Bacillota
GAA
Phe
>WENV181184203
OEJW01085607
238974
Bacillota
GAA
Phe
>WENV181184017
OEJW01032017
235113
Bacillota
GAA
Phe
>WENV181183782
OEJW01006023
235113
Bacillota
GAA
Phe
>WENV181183590
OEJW01001123
277200
Bacillota
GGC
Ala
>WENV181184078
OEJW01050633
243098
Bacillota
GGT
Thr
>WENV181184000
OEJW01027021
58712
Bacillota
CAG
Leu
>WENV181183942
OEJW01020013
58712
Bacillota
CAG
Leu
>WENV181184201
OEJW01084777
21693
Bacillota
GCT
Ser
>WENV181184129
OEJW01062433
245296
Bacillota
CCC
Gly
>WENV181184348
OEJW01157376
272992
Bacillota
CTT
Lys
>WENV181184055
OEJW01041151
272992
Bacillota
CTT
Lys
>WENV181183672
OEJW01002324
272992
Bacillota
CTT
Lys
>WENV181183925
OEJW01017580
344240
Bacillota
GCC
Gly
>WENV181183676
OEJW01002441
196632
Bacillota
GTC
Asp
>WENV181183817
OEJW01008314
299139
Bacillota
TGC
Ala
>WENV181184131
OEJW01063030
144594
Bacillota
CAC
Val
>WENV181183963
OEJW01021934
144594
Bacillota
CAC
Val
>WENV181183962
OEJW01021908
144594
Bacillota
CAC
Val
>WENV181184015
OEJW01032017
95563
Bacillota
GTA
Tyr
>WENV181183972
OEJW01022556
338131
Bacillota
GCC
Gly
>WENV181183697
OEJW01002898
338131
Bacillota
GCC
Gly
>WENV181183377
OEJW01000239
338131
Bacillota
GCC
Gly
>WENV181184247
OEJW01112133
338128
Bacillota
TTC
Glu
>WENV181183677
OEJW01002441
245344
Bacillota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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