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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
64 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181219882
OFCP01002401
243647
Bacillota
TTT
Lys
>WENV181219722
OFCP01000447
196621
Bacillota
GTC
Asp
>WENV181219907
OFCP01003436
16842
Bacillota
CGA
Ser
>WENV181219787
OFCP01000825
144612
Bacillota
TCT
Arg
>WENV181219562
OFCP01000088
246392
Bacillota
GTT
Asn
>WENV181219873
OFCP01002266
340263
Bacillota
TTC
Glu
>WENV181219734
OFCP01000460
44854
Bacillota
TGA
Ser
>WENV181219622
OFCP01000176
37549
Bacillota
TAA
Leu
>WENV181219465
OFCP01000011
307003
Bacillota
TGC
Ala
>WENV181219868
OFCP01002148
239080
Bacillota
CTG
Gln
>WENV181219626
OFCP01000183
243119
Bacillota
CTT
Lys
>WENV181219746
OFCP01000544
152047
Bacillota
GGG
Pro
>WENV181219615
OFCP01000172
241761
Bacillota
TAC
Val
>WENV181219564
OFCP01000088
241761
Bacillota
TAC
Val
>WENV181219964
OFCP01010871
44859
Bacillota
AAG
Leu
>WENV181219826
OFCP01001216
11034
Bacillota
GGA
Ser
>WENV181219815
OFCP01001136
11034
Bacillota
GGA
Ser
>WENV181219612
OFCP01000172
342736
Bacillota
TTG
Gln
>WENV181219894
OFCP01002712
37437
Bacillota
TAA
Leu
>WENV181219930
OFCP01004886
235079
Bacillota
GAA
Phe
>WENV181219938
OFCP01006615
340265
Bacillota
GCC
Gly
>WENV181219884
OFCP01002401
243612
Bacillota
TAC
Val
>WENV181219708
OFCP01000412
338149
Bacillota
CTC
Glu
>WENV181219814
OFCP01001125
245298
Bacillota
CGG
Pro
>WENV181219931
OFCP01005370
37551
Bacillota
CGA
Ser
>WENV181219946
OFCP01007601
147135
Bacillota
ACG
Arg
>WENV181219781
OFCP01000774
148268
Bacillota
CGG
Pro
>WENV181219804
OFCP01000989
411547
Bacillota
CTG
Gln
>WENV181219800
OFCP01000934
147684
Bacillota
ACG
Arg
>WENV181219735
OFCP01000460
4624
Bacillota
GCT
Ser
>WENV181219978
OFCP01015447
342895
Bacillota
CAT
Met
>WENV181219767
OFCP01000710
235095
Bacillota
GGT
Thr
>WENV181219725
OFCP01000447
235095
Bacillota
GGT
Thr
>WENV181219723
OFCP01000447
235095
Bacillota
GGT
Thr
>WENV181219621
OFCP01000176
419945
Bacillota
GCA
Cys
>WENV181219812
OFCP01001123
194150
Bacillota
TGG
Pro
>WENV181219874
OFCP01002266
304759
Bacillota
TAC
Val
>WENV181219704
OFCP01000394
411549
Bacillota
TTG
Gln
>WENV181219926
OFCP01004750
152045
Bacillota
CAT
Met
>WENV181219864
OFCP01002042
148188
Bacillota
CCG
Arg
>WENV181219719
OFCP01000442
148188
Bacillota
CCG
Arg
>WENV181219919
OFCP01004326
152046
Bacillota
TCT
Arg
>WENV181219824
OFCP01001198
80612
Bacillota
GTA
Tyr
>WENV181219890
OFCP01002712
235197
Bacillota
GTC
Asp
>WENV181219892
OFCP01002712
368876
Bacillota
GCC
Gly
>WENV181219780
OFCP01000774
152051
Bacillota
ACG
Arg
>WENV181219761
OFCP01000662
235124
Bacillota
TGG
Pro
>WENV181219880
OFCP01002401
243613
Bacillota
GTG
His
>WENV181219715
OFCP01000424
144583
Bacillota
ACG
Arg
>WENV181219721
OFCP01000447
235171
Bacillota
CCA
Trp
>WENV181219832
OFCP01001350
144621
Bacillota
GTT
Asn
>WENV181219836
OFCP01001423
58712
Bacillota
CAG
Leu
>WENV181219696
OFCP01000374
58712
Bacillota
CAG
Leu
>WENV181219688
OFCP01000332
245296
Bacillota
CCC
Gly
>WENV181219709
OFCP01000412
272992
Bacillota
CTT
Lys
>WENV181219872
OFCP01002266
239078
Bacillota
TTT
Lys
>WENV181219925
OFCP01004750
281472
Bacillota
GGT
Thr
>WENV181219784
OFCP01000783
144594
Bacillota
CAC
Val
>WENV181219972
OFCP01013395
413657
Bacillota
CCC
Gly
>WENV181219986
OFCP01016271
272488
Bacillota
GAA
Phe
>WENV181219620
OFCP01000176
384950
Bacillota
GCC
Gly
>WENV181219958
OFCP01008788
287034
Bacillota
GTT
Asn
>WENV181219881
OFCP01002401
343027
Bacillota
TTG
Gln
>WENV181219863
OFCP01001986
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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