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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
103 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183726642
PJTO01000045
146962
Bacteroidota
CAT
Met
>WENV183726776
PJTO01000157
159146
Bacteroidota
TCG
Arg
>WENV183727229
PJTO01016151
165001
Bacteroidota
GTT
Asn
>WENV183726892
PJTO01000376
412419
Bacteroidota
CCA
Trp
>WENV183726658
PJTO01000053
147867
Bacteroidota
GTG
His
>WENV183726901
PJTO01000463
147867
Bacteroidota
GTG
His
>WENV183726781
PJTO01000166
145315
Bacteroidota
CAT
Met
>WENV183727248
PJTO01017480
145315
Bacteroidota
CAT
Met
>WENV183726857
PJTO01000289
147864
Bacteroidota
TGG
Pro
>WENV183726836
PJTO01000228
147864
Bacteroidota
TGG
Pro
>WENV183726711
PJTO01000083
147864
Bacteroidota
TGG
Pro
>WENV183726710
PJTO01000083
147864
Bacteroidota
TGG
Pro
>WENV183726709
PJTO01000083
147864
Bacteroidota
TGG
Pro
>WENV183727067
PJTO01003438
45276
Bacteroidota
TGA
Ser
>WENV183727066
PJTO01003438
45276
Bacteroidota
TGA
Ser
>WENV183726819
PJTO01000204
45276
Bacteroidota
TGA
Ser
>WENV183726745
PJTO01000115
45276
Bacteroidota
TGA
Ser
>WENV183726740
PJTO01000113
45276
Bacteroidota
TGA
Ser
>WENV183726660
PJTO01000053
45276
Bacteroidota
TGA
Ser
>WENV183726563
PJTO01000013
45276
Bacteroidota
TGA
Ser
>WENV183726945
PJTO01000784
119517
Bacteroidota
CAA
Leu
>WENV183726902
PJTO01000463
119517
Bacteroidota
CAA
Leu
>WENV183726666
PJTO01000057
119517
Bacteroidota
CAA
Leu
>WENV183727349
PJTO01032479
348279
Bacteroidota
CAT
Met
>WENV183726870
PJTO01000321
51937
Bacteroidota
TAA
Leu
>WENV183726817
PJTO01000204
51937
Bacteroidota
TAA
Leu
>WENV183727333
PJTO01029453
256428
Bacteroidota
GAA
Phe
>WENV183727047
PJTO01002676
256428
Bacteroidota
GAA
Phe
>WENV183726614
PJTO01000032
173775
Bacteroidota
GTG
His
>WENV183726673
PJTO01000063
235817
Bacteroidota
GAA
Phe
>WENV183726672
PJTO01000063
235817
Bacteroidota
GAA
Phe
>WENV183726553
PJTO01000008
235817
Bacteroidota
GAA
Phe
>WENV183726691
PJTO01000069
237606
Bacteroidota
GCC
Gly
>WENV183726547
PJTO01000006
59351
Bacteroidota
GAG
Leu
>WENV183726810
PJTO01000189
415980
Bacteroidota
TTG
Gln
>WENV183726809
PJTO01000189
415980
Bacteroidota
TTG
Gln
>WENV183727058
PJTO01003038
413660
Bacteroidota
TTG
Gln
>WENV183726616
PJTO01000032
267483
Bacteroidota
TGT
Thr
>WENV183726590
PJTO01000028
267483
Bacteroidota
TGT
Thr
>WENV183726775
PJTO01000156
113741
Bacteroidota
GTA
Tyr
>WENV183726773
PJTO01000152
113741
Bacteroidota
GTA
Tyr
>WENV183726849
PJTO01000258
338625
Bacteroidota
TTC
Glu
>WENV183727105
PJTO01004961
145504
Bacteroidota
TGT
Thr
>WENV183726890
PJTO01000376
267805
Bacteroidota
TCC
Gly
>WENV183726592
PJTO01000028
267805
Bacteroidota
TCC
Gly
>WENV183727106
PJTO01004961
95728
Bacteroidota
GTA
Tyr
>WENV183727298
PJTO01024438
151405
Bacteroidota
TGC
Ala
>WENV183727075
PJTO01003619
151405
Bacteroidota
TGC
Ala
>WENV183726792
PJTO01000182
241469
Bacteroidota
GAA
Phe
>WENV183726717
PJTO01000099
241469
Bacteroidota
GAA
Phe
>WENV183727103
PJTO01004808
168744
Bacteroidota
GTG
His
>WENV183726641
PJTO01000045
239858
Bacteroidota
TTT
Lys
>WENV183726639
PJTO01000045
239858
Bacteroidota
TTT
Lys
>WENV183726638
PJTO01000045
239858
Bacteroidota
TTT
Lys
>WENV183726874
PJTO01000331
347983
Bacteroidota
TTC
Glu
>WENV183726848
PJTO01000258
347983
Bacteroidota
TTC
Glu
>WENV183726791
PJTO01000176
159029
Bacteroidota
GTG
His
>WENV183726808
PJTO01000188
412189
Bacteroidota
CCA
Trp
>WENV183726768
PJTO01000149
412189
Bacteroidota
CCA
Trp
>WENV183726667
PJTO01000057
413186
Bacteroidota
>WENV183727188
PJTO01011074
411771
Bacteroidota
TTG
Gln
>WENV183726750
PJTO01000120
127215
Bacteroidota
TAC
Val
>WENV183726748
PJTO01000120
127215
Bacteroidota
TAC
Val
>WENV183726725
PJTO01000107
95684
Bacteroidota
TAG
Leu
>WENV183726668
PJTO01000061
238600
Bacteroidota
CAT
Met
>WENV183726631
PJTO01000037
238600
Bacteroidota
CAT
Met
>WENV183726891
PJTO01000376
342824
Bacteroidota
GGT
Thr
>WENV183726593
PJTO01000028
342824
Bacteroidota
GGT
Thr
>WENV183726545
PJTO01000006
199370
Bacteroidota
GTT
Asn
>WENV183726929
PJTO01000634
46876
Bacteroidota
TGA
Ser
>WENV183726749
PJTO01000120
126680
Bacteroidota
TAC
Val
>WENV183727198
PJTO01011905
166688
Bacteroidota
GTC
Asp
>WENV183727197
PJTO01011905
166688
Bacteroidota
GTC
Asp
>WENV183726706
PJTO01000083
411719
Bacteroidota
GCA
Cys
>WENV183726587
PJTO01000023
160686
Bacteroidota
CAT
Met
>WENV183726618
PJTO01000032
25256
Bacteroidota
GCT
Ser
>WENV183726739
PJTO01000111
152147
Bacteroidota
TCT
Arg
>WENV183726888
PJTO01000376
235822
Bacteroidota
TGT
Thr
>WENV183726557
PJTO01000008
235822
Bacteroidota
TGT
Thr
>WENV183726556
PJTO01000008
235822
Bacteroidota
TGT
Thr
>WENV183726555
PJTO01000008
235822
Bacteroidota
TGT
Thr
>WENV183726737
PJTO01000111
59930
Bacteroidota
GCT
Ser
>WENV183727026
PJTO01002021
193627
Bacteroidota
TCT
Arg
>WENV183726708
PJTO01000083
147863
Bacteroidota
CAT
Met
>WENV183726707
PJTO01000083
147863
Bacteroidota
CAT
Met
>WENV183727269
PJTO01020323
150454
Bacteroidota
TGT
Thr
>WENV183727358
PJTO01033753
150454
Bacteroidota
TGT
Thr
>WENV183726841
PJTO01000234
150454
Bacteroidota
TGT
Thr
>WENV183726840
PJTO01000234
150454
Bacteroidota
TGT
Thr
>WENV183726772
PJTO01000152
150454
Bacteroidota
TGT
Thr
>WENV183726990
PJTO01001389
145508
Bacteroidota
GTC
Asp
>WENV183727025
PJTO01002021
128249
Bacteroidota
TGG
Pro
>WENV183727325
PJTO01028302
236053
Bacteroidota
TTT
Lys
>WENV183727247
PJTO01017098
236053
Bacteroidota
TTT
Lys
>WENV183727246
PJTO01017098
236053
Bacteroidota
TTT
Lys
>WENV183726807
PJTO01000188
360629
Bacteroidota
GGT
Thr
>WENV183726718
PJTO01000099
96696
Bacteroidota
TAG
Leu
>WENV183726793
PJTO01000182
37199
Bacteroidota
TAA
Leu
>WENV183726692
PJTO01000069
37199
Bacteroidota
TAA
Leu
>WENV183727192
PJTO01011519
179613
Bacteroidota
CAT
Met
>WENV183726759
PJTO01000132
256304
Bacteroidota
TTT
Lys
>WENV183726758
PJTO01000132
256304
Bacteroidota
TTT
Lys
>WENV183726640
PJTO01000045
83316
Bacteroidota
GAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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