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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
89 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170012325
APMI01154123
781234
Bacteroidota
GCA
Cys
>WENV170010549
APMI01020157
659854
Bacteroidota
GGT
Thr
>WENV170009648
APMI01001185
281518
Bacteroidota
CAT
Met
>WENV170010026
APMI01006949
660939
Bacteroidota
TCG
Arg
>WENV170009345
APMI01000103
274896
Bacteroidota
GTC
Asp
>WENV170009374
APMI01000133
274896
Bacteroidota
GTC
Asp
>WENV170009385
APMI01000139
274896
Bacteroidota
GTC
Asp
>WENV170009698
APMI01001989
274896
Bacteroidota
GTC
Asp
>WENV170012072
APMI01117072
274896
Bacteroidota
GTC
Asp
>WENV170009871
APMI01004377
656707
Bacteroidota
TTC
Glu
>WENV170010271
APMI01012152
656707
Bacteroidota
TTC
Glu
>WENV170009714
APMI01002118
241299
Bacteroidota
TAC
Val
>WENV170010328
APMI01013913
241299
Bacteroidota
TAC
Val
>WENV170010329
APMI01013913
241299
Bacteroidota
TAC
Val
>WENV170010393
APMI01015708
241299
Bacteroidota
TAC
Val
>WENV170010394
APMI01015708
241299
Bacteroidota
TAC
Val
>WENV170010611
APMI01022453
241299
Bacteroidota
TAC
Val
>WENV170010612
APMI01022453
241299
Bacteroidota
TAC
Val
>WENV170010046
APMI01007416
452637
Bacteroidota
TCC
Gly
>WENV170009777
APMI01002882
180751
Bacteroidota
TAG
Leu
>WENV170009908
APMI01004840
180751
Bacteroidota
TAG
Leu
>WENV170010833
APMI01030622
456548
Bacteroidota
TCC
Gly
>WENV170011348
APMI01059035
782802
Bacteroidota
GCA
Cys
>WENV170011346
APMI01058966
780607
Bacteroidota
TTG
Gln
>WENV170009628
APMI01001021
277301
Bacteroidota
GTG
His
>WENV170010392
APMI01015701
277301
Bacteroidota
GTG
His
>WENV170011762
APMI01089367
277301
Bacteroidota
GTG
His
>WENV170009897
APMI01004625
456895
Bacteroidota
CAT
Met
>WENV170010834
APMI01030622
656066
Bacteroidota
GGT
Thr
>WENV170011884
APMI01099529
457188
Bacteroidota
GCC
Gly
>WENV170009533
APMI01000572
457188
Bacteroidota
GCC
Gly
>WENV170009375
APMI01000133
457188
Bacteroidota
GCC
Gly
>WENV170012203
APMI01135372
271141
Bacteroidota
CGG
Pro
>WENV170010039
APMI01007377
780606
Bacteroidota
GCA
Cys
>WENV170010723
APMI01026177
275281
Bacteroidota
TCT
Arg
>WENV170011526
APMI01072182
275281
Bacteroidota
TCT
Arg
>WENV170011520
APMI01071791
275282
Bacteroidota
GTT
Asn
>WENV170009861
APMI01004204
456549
Bacteroidota
TTT
Lys
>WENV170009863
APMI01004204
456549
Bacteroidota
TTT
Lys
>WENV170010752
APMI01027654
456549
Bacteroidota
TTT
Lys
>WENV170010754
APMI01027654
456549
Bacteroidota
TTT
Lys
>WENV170010062
APMI01007662
87433
Bacteroidota
TGA
Ser
>WENV170010795
APMI01029225
87433
Bacteroidota
TGA
Ser
>WENV170011725
APMI01085545
87433
Bacteroidota
TGA
Ser
>WENV170011738
APMI01086737
462022
Bacteroidota
GAA
Phe
>WENV170010219
APMI01010939
462022
Bacteroidota
GAA
Phe
>WENV170009844
APMI01003841
782429
Bacteroidota
GCA
Cys
>WENV170009913
APMI01004895
782429
Bacteroidota
GCA
Cys
>WENV170010661
APMI01024383
228628
Bacteroidota
CAA
Leu
>WENV170011157
APMI01046468
228628
Bacteroidota
CAA
Leu
>WENV170009910
APMI01004840
115574
Bacteroidota
TAA
Leu
>WENV170012282
APMI01146074
273382
Bacteroidota
CGG
Pro
>WENV170009392
APMI01000157
275278
Bacteroidota
GTC
Asp
>WENV170012316
APMI01152593
456894
Bacteroidota
CAT
Met
>WENV170010968
APMI01036806
273341
Bacteroidota
TGC
Ala
>WENV170011753
APMI01087798
782805
Bacteroidota
TTG
Gln
>WENV170011324
APMI01055975
454407
Bacteroidota
TCC
Gly
>WENV170010721
APMI01026177
88377
Bacteroidota
GCT
Ser
>WENV170009870
APMI01004377
660235
Bacteroidota
TTC
Glu
>WENV170010270
APMI01012152
655879
Bacteroidota
TTC
Glu
>WENV170010768
APMI01028299
87589
Bacteroidota
TGA
Ser
>WENV170011507
APMI01070476
456551
Bacteroidota
GAA
Phe
>WENV170010063
APMI01007674
782428
Bacteroidota
CCA
Trp
>WENV170010916
APMI01035055
782428
Bacteroidota
CCA
Trp
>WENV170011184
APMI01048253
782428
Bacteroidota
CCA
Trp
>WENV170009909
APMI01004840
456547
Bacteroidota
GCC
Gly
>WENV170011559
APMI01074207
456547
Bacteroidota
GCC
Gly
>WENV170012354
APMI01159742
294497
Bacteroidota
GTT
Asn
>WENV170010173
APMI01010166
286135
Bacteroidota
CAT
Met
>WENV170009629
APMI01001021
286135
Bacteroidota
CAT
Met
>WENV170011859
APMI01097311
273342
Bacteroidota
TGG
Pro
>WENV170011746
APMI01087448
273342
Bacteroidota
TGG
Pro
>WENV170010532
APMI01019646
456899
Bacteroidota
TTT
Lys
>WENV170010172
APMI01010163
47471
Bacteroidota
GGA
Ser
>WENV170011498
APMI01069640
47471
Bacteroidota
GGA
Ser
>WENV170011761
APMI01089128
47471
Bacteroidota
GGA
Ser
>WENV170009924
APMI01005206
275279
Bacteroidota
GTC
Asp
>WENV170010240
APMI01011318
275279
Bacteroidota
GTC
Asp
>WENV170011456
APMI01066849
275279
Bacteroidota
GTC
Asp
>WENV170011457
APMI01066849
275279
Bacteroidota
GTC
Asp
>WENV170010446
APMI01017301
275945
Bacteroidota
GTT
Asn
>WENV170010573
APMI01021065
275945
Bacteroidota
GTT
Asn
>WENV170011332
APMI01057085
275676
Bacteroidota
CAT
Met
>WENV170009677
APMI01001636
468683
Bacteroidota
GAA
Phe
>WENV170010832
APMI01030622
218207
Bacteroidota
GTA
Tyr
>WENV170011880
APMI01098654
243633
Bacteroidota
TGG
Pro
>WENV170011679
APMI01081683
275810
Bacteroidota
TCT
Arg
>WENV170009778
APMI01002882
464288
Bacteroidota
GCC
Gly
>WENV170011558
APMI01074207
180846
Bacteroidota
TAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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