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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
23 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170554307
CXWK01061364
452701
Betaproteobacteria
CCA
Trp
>WENV170554308
CXWK01061503
86934
Betaproteobacteria
TGA
Ser
>WENV170553496
CXWK01020865
780032
Betaproteobacteria
GCA
Cys
>WENV170553439
CXWK01018267
274063
Betaproteobacteria
ACG
Arg
>WENV170553894
CXWK01036772
655629
Betaproteobacteria
CAC
Val
>WENV170553821
CXWK01032234
463660
Betaproteobacteria
CCA
Trp
>WENV170553495
CXWK01020865
477700
Betaproteobacteria
GCC
Gly
>WENV170554213
CXWK01054258
288758
Betaproteobacteria
TTG
Gln
>WENV170553750
CXWK01030047
454227
Betaproteobacteria
GTG
His
>WENV170553765
CXWK01030412
454227
Betaproteobacteria
GTG
His
>WENV170554166
CXWK01051005
456766
Betaproteobacteria
CGT
Thr
>WENV170554077
CXWK01045527
273273
Betaproteobacteria
TTG
Gln
>WENV170554474
CXWK01071800
472411
Betaproteobacteria
CTT
Lys
>WENV170554096
CXWK01046189
470913
Betaproteobacteria
TTT
Lys
>WENV170554100
CXWK01046485
458932
Betaproteobacteria
GTT
Asn
>WENV170554362
CXWK01064081
780146
Betaproteobacteria
CCC
Gly
>WENV170553510
CXWK01021541
457606
Betaproteobacteria
TTT
Lys
>WENV170554215
CXWK01054289
303770
Betaproteobacteria
ACG
Arg
>WENV170553533
CXWK01022320
465080
Betaproteobacteria
GGC
Ala
>WENV170554726
CXWK01087316
283585
Betaproteobacteria
CAT
Met
>WENV170553095
CXWK01007461
282068
Betaproteobacteria
TTG
Gln
>WENV170554971
CXWK01092308
274850
Betaproteobacteria
CGG
Pro
>WENV170553130
CXWK01008755
780144
Betaproteobacteria
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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