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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
77 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183737045
PJUD01000301
454697
Alphaproteobacteria
TAC
Val
>WENV183738178
PJUD01105261
780809
Alphaproteobacteria
CTG
Gln
>WENV183736969
PJUD01000138
457159
Alphaproteobacteria
CGC
Ala
>WENV183736715
PJUD01000004
273448
Alphaproteobacteria
CGG
Pro
>WENV183736968
PJUD01000137
273448
Alphaproteobacteria
CGG
Pro
>WENV183737815
PJUD01036195
273448
Alphaproteobacteria
CGG
Pro
>WENV183738076
PJUD01077561
273448
Alphaproteobacteria
CGG
Pro
>WENV183737026
PJUD01000252
273905
Alphaproteobacteria
TGG
Pro
>WENV183736740
PJUD01000007
452565
Alphaproteobacteria
GAA
Phe
>WENV183737992
PJUD01062332
113518
Alphaproteobacteria
CAG
Leu
>WENV183736882
PJUD01000078
182272
Alphaproteobacteria
CAA
Leu
>WENV183737984
PJUD01061161
30705
Alphaproteobacteria
GCT
Ser
>WENV183736814
PJUD01000039
154277
Alphaproteobacteria
GTA
Tyr
>WENV183738253
PJUD01137780
270887
Alphaproteobacteria
TGG
Pro
>WENV183738198
PJUD01116451
656172
Alphaproteobacteria
TTC
Glu
>WENV183736947
PJUD01000117
463420
Alphaproteobacteria
CGT
Thr
>WENV183738120
PJUD01086896
336284
Alphaproteobacteria
CAT
Met
>WENV183736883
PJUD01000078
273155
Alphaproteobacteria
GTG
His
>WENV183737037
PJUD01000281
654960
Alphaproteobacteria
CTC
Glu
>WENV183736793
PJUD01000030
19988
Alphaproteobacteria
GCT
Ser
>WENV183736832
PJUD01000050
454180
Alphaproteobacteria
CGT
Thr
>WENV183736997
PJUD01000198
281747
Alphaproteobacteria
CCT
Arg
>WENV183738031
PJUD01070673
457364
Alphaproteobacteria
TGT
Thr
>WENV183738052
PJUD01073502
287573
Alphaproteobacteria
TGG
Pro
>WENV183738264
PJUD01140658
180409
Alphaproteobacteria
GTA
Tyr
>WENV183738168
PJUD01098790
451867
Alphaproteobacteria
CTT
Lys
>WENV183737036
PJUD01000275
282775
Alphaproteobacteria
TCT
Arg
>WENV183736970
PJUD01000138
451742
Alphaproteobacteria
GGC
Ala
>WENV183737081
PJUD01000362
451742
Alphaproteobacteria
GGC
Ala
>WENV183737082
PJUD01000362
451742
Alphaproteobacteria
GGC
Ala
>WENV183737937
PJUD01054638
451742
Alphaproteobacteria
GGC
Ala
>WENV183737000
PJUD01000202
654997
Alphaproteobacteria
CTC
Glu
>WENV183737168
PJUD01000814
155170
Alphaproteobacteria
TAA
Leu
>WENV183737011
PJUD01000214
457162
Alphaproteobacteria
TTT
Lys
>WENV183736845
PJUD01000055
457161
Alphaproteobacteria
GAA
Phe
>WENV183736917
PJUD01000100
180320
Alphaproteobacteria
TAG
Leu
>WENV183737893
PJUD01045016
654792
Alphaproteobacteria
GGT
Thr
>WENV183737979
PJUD01060107
654792
Alphaproteobacteria
GGT
Thr
>WENV183737581
PJUD01016274
276089
Alphaproteobacteria
CCG
Arg
>WENV183738243
PJUD01133515
455506
Alphaproteobacteria
CAT
Met
>WENV183737643
PJUD01019585
653591
Alphaproteobacteria
TTG
Gln
>WENV183737086
PJUD01000379
270775
Alphaproteobacteria
ACG
Arg
>WENV183737255
PJUD01002106
270775
Alphaproteobacteria
ACG
Arg
>WENV183737760
PJUD01030383
270775
Alphaproteobacteria
ACG
Arg
>WENV183737766
PJUD01030640
654986
Alphaproteobacteria
GCC
Gly
>WENV183737869
PJUD01042347
452258
Alphaproteobacteria
CAT
Met
>WENV183737781
PJUD01032985
661074
Alphaproteobacteria
GCC
Gly
>WENV183736719
PJUD01000004
653931
Alphaproteobacteria
GTT
Asn
>WENV183737054
PJUD01000309
653931
Alphaproteobacteria
GTT
Asn
>WENV183737055
PJUD01000309
653931
Alphaproteobacteria
GTT
Asn
>WENV183737123
PJUD01000509
653931
Alphaproteobacteria
GTT
Asn
>WENV183737527
PJUD01013119
653931
Alphaproteobacteria
GTT
Asn
>WENV183736747
PJUD01000012
112838
Alphaproteobacteria
GAG
Leu
>WENV183738086
PJUD01080513
779492
Alphaproteobacteria
GCA
Cys
>WENV183736718
PJUD01000004
455026
Alphaproteobacteria
TTC
Glu
>WENV183736906
PJUD01000093
47331
Alphaproteobacteria
CGA
Ser
>WENV183736726
PJUD01000004
46044
Alphaproteobacteria
TGA
Ser
>WENV183737856
PJUD01040291
46272
Alphaproteobacteria
CGA
Ser
>WENV183736990
PJUD01000185
275923
Alphaproteobacteria
ACG
Arg
>WENV183736991
PJUD01000185
275923
Alphaproteobacteria
ACG
Arg
>WENV183738229
PJUD01128293
273598
Alphaproteobacteria
CGG
Pro
>WENV183736716
PJUD01000004
294262
Alphaproteobacteria
CCT
Arg
>WENV183736973
PJUD01000141
452755
Alphaproteobacteria
TAC
Val
>WENV183738126
PJUD01088190
273160
Alphaproteobacteria
ACG
Arg
>WENV183738242
PJUD01133350
273160
Alphaproteobacteria
ACG
Arg
>WENV183737076
PJUD01000354
112429
Alphaproteobacteria
GAG
Leu
>WENV183736729
PJUD01000005
273907
Alphaproteobacteria
ACG
Arg
>WENV183738080
PJUD01078005
273907
Alphaproteobacteria
ACG
Arg
>WENV183738081
PJUD01078005
273907
Alphaproteobacteria
ACG
Arg
>WENV183737935
PJUD01053377
275868
Alphaproteobacteria
TCT
Arg
>WENV183738296
PJUD01152784
780283
Alphaproteobacteria
TCC
Gly
>WENV183736686
PJUD01000001
780039
Alphaproteobacteria
GCA
Cys
>WENV183738366
PJUD01177475
454433
Alphaproteobacteria
TGT
Thr
>WENV183738197
PJUD01116356
454699
Alphaproteobacteria
TTT
Lys
>WENV183736918
PJUD01000100
275927
Alphaproteobacteria
CCG
Arg
>WENV183737083
PJUD01000367
656202
Alphaproteobacteria
TTG
Gln
>WENV183736890
PJUD01000082
654995
Alphaproteobacteria
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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