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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
141 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170606520
FUWD010677574
237516
Betaproteobacteria
GCC
Gly
>WENV170621737
FUWD013070889
237516
Betaproteobacteria
GCC
Gly
>WENV170629924
FUWD013286579
237516
Betaproteobacteria
GCC
Gly
>WENV170606755
FUWD010727143
239009
Betaproteobacteria
TAC
Val
>WENV170599731
FUWD010088955
148501
Betaproteobacteria
TCT
Arg
>WENV170609360
FUWD011381853
148501
Betaproteobacteria
TCT
Arg
>WENV170617407
FUWD012925174
148501
Betaproteobacteria
TCT
Arg
>WENV170617409
FUWD012925175
148501
Betaproteobacteria
TCT
Arg
>WENV170606409
FUWD010666227
190198
Betaproteobacteria
TTG
Gln
>WENV170600581
FUWD010133496
239252
Betaproteobacteria
TTT
Lys
>WENV170602744
FUWD010261413
239252
Betaproteobacteria
TTT
Lys
>WENV170616170
FUWD012880194
239252
Betaproteobacteria
TTT
Lys
>WENV170619649
FUWD013018524
239252
Betaproteobacteria
TTT
Lys
>WENV170624255
FUWD013178581
239252
Betaproteobacteria
TTT
Lys
>WENV170627757
FUWD013236974
239252
Betaproteobacteria
TTT
Lys
>WENV170632533
FUWD013384090
239252
Betaproteobacteria
TTT
Lys
>WENV170599277
FUWD010070307
356609
Betaproteobacteria
CCT
Arg
>WENV170599552
FUWD010079528
356609
Betaproteobacteria
CCT
Arg
>WENV170617278
FUWD012920043
356609
Betaproteobacteria
CCT
Arg
>WENV170617279
FUWD012920044
356609
Betaproteobacteria
CCT
Arg
>WENV170617378
FUWD012923934
96224
Betaproteobacteria
GTA
Tyr
>WENV170600929
FUWD010148660
145694
Betaproteobacteria
ACG
Arg
>WENV170608239
FUWD010906778
145694
Betaproteobacteria
ACG
Arg
>WENV170617673
FUWD012934015
145694
Betaproteobacteria
ACG
Arg
>WENV170618030
FUWD012947930
145694
Betaproteobacteria
ACG
Arg
>WENV170618031
FUWD012947931
145694
Betaproteobacteria
ACG
Arg
>WENV170625336
FUWD013196215
145694
Betaproteobacteria
ACG
Arg
>WENV170625687
FUWD013203399
145694
Betaproteobacteria
ACG
Arg
>WENV170633575
FUWD013398909
145694
Betaproteobacteria
ACG
Arg
>WENV170633909
FUWD013405419
145694
Betaproteobacteria
ACG
Arg
>WENV170621750
FUWD013071632
146768
Betaproteobacteria
CAT
Met
>WENV170629937
FUWD013287319
146768
Betaproteobacteria
CAT
Met
>WENV170603977
FUWD010349419
236112
Betaproteobacteria
GAA
Phe
>WENV170603683
FUWD010329482
152435
Betaproteobacteria
GTC
Asp
>WENV170598746
FUWD010047434
23830
Betaproteobacteria
CGA
Ser
>WENV170599746
FUWD010090193
23830
Betaproteobacteria
CGA
Ser
>WENV170624233
FUWD013178193
23830
Betaproteobacteria
CGA
Ser
>WENV170632515
FUWD013383781
23830
Betaproteobacteria
CGA
Ser
>WENV170614552
FUWD012836712
260088
Betaproteobacteria
CGT
Thr
>WENV170623432
FUWD013151303
59352
Betaproteobacteria
TAG
Leu
>WENV170631701
FUWD013362286
59352
Betaproteobacteria
TAG
Leu
>WENV170606213
FUWD010632494
96225
Betaproteobacteria
CAA
Leu
>WENV170609588
FUWD011439356
96225
Betaproteobacteria
CAA
Leu
>WENV170624256
FUWD013178586
96225
Betaproteobacteria
CAA
Leu
>WENV170632534
FUWD013384095
96225
Betaproteobacteria
CAA
Leu
>WENV170599950
FUWD010099646
239248
Betaproteobacteria
TGT
Thr
>WENV170601171
FUWD010159467
239248
Betaproteobacteria
TGT
Thr
>WENV170618827
FUWD012988282
239248
Betaproteobacteria
TGT
Thr
>WENV170624192
FUWD013177321
239248
Betaproteobacteria
TGT
Thr
>WENV170632475
FUWD013383101
239248
Betaproteobacteria
TGT
Thr
>WENV170609428
FUWD011395570
147079
Betaproteobacteria
TTG
Gln
>WENV170618467
FUWD012969984
173491
Betaproteobacteria
TCT
Arg
>WENV170599115
FUWD010063368
412591
Betaproteobacteria
GCA
Cys
>WENV170619739
FUWD013020327
412591
Betaproteobacteria
GCA
Cys
>WENV170624446
FUWD013181810
412591
Betaproteobacteria
GCA
Cys
>WENV170624448
FUWD013181811
412591
Betaproteobacteria
GCA
Cys
>WENV170627860
FUWD013238633
412591
Betaproteobacteria
GCA
Cys
>WENV170632734
FUWD013386698
412591
Betaproteobacteria
GCA
Cys
>WENV170632736
FUWD013386699
412591
Betaproteobacteria
GCA
Cys
>WENV170620584
FUWD013034578
67484
Betaproteobacteria
GTA
Tyr
>WENV170628724
FUWD013251953
67484
Betaproteobacteria
GTA
Tyr
>WENV170604492
FUWD010402842
68998
Betaproteobacteria
CAG
Leu
>WENV170625137
FUWD013192376
251202
Betaproteobacteria
TGT
Thr
>WENV170633393
FUWD013395544
251202
Betaproteobacteria
TGT
Thr
>WENV170624362
FUWD013180592
59425
Betaproteobacteria
TAG
Leu
>WENV170632651
FUWD013385732
59425
Betaproteobacteria
TAG
Leu
>WENV170601071
FUWD010154907
99249
Betaproteobacteria
CAA
Leu
>WENV170604206
FUWD010373631
61237
Betaproteobacteria
TAG
Leu
>WENV170616697
FUWD012899579
59503
Betaproteobacteria
CAG
Leu
>WENV170616790
FUWD012903087
59503
Betaproteobacteria
CAG
Leu
>WENV170621592
FUWD013064552
95951
Betaproteobacteria
CAA
Leu
>WENV170629774
FUWD013280555
95951
Betaproteobacteria
CAA
Leu
>WENV170619730
FUWD013020172
239238
Betaproteobacteria
CCA
Trp
>WENV170627852
FUWD013238495
239238
Betaproteobacteria
CCA
Trp
>WENV170601279
FUWD010165004
147332
Betaproteobacteria
CAT
Met
>WENV170609506
FUWD011423069
3296
Betaproteobacteria
GCT
Ser
>WENV170616291
FUWD012883323
3296
Betaproteobacteria
GCT
Ser
>WENV170619628
FUWD013018041
3296
Betaproteobacteria
GCT
Ser
>WENV170627734
FUWD013236518
3296
Betaproteobacteria
GCT
Ser
>WENV170599730
FUWD010088955
148500
Betaproteobacteria
TGG
Pro
>WENV170617406
FUWD012925174
148500
Betaproteobacteria
TGG
Pro
>WENV170617408
FUWD012925175
148500
Betaproteobacteria
TGG
Pro
>WENV170619936
FUWD013023157
148500
Betaproteobacteria
TGG
Pro
>WENV170628059
FUWD013241254
148500
Betaproteobacteria
TGG
Pro
>WENV170601999
FUWD010208081
267868
Betaproteobacteria
GTG
His
>WENV170602762
FUWD010262682
267868
Betaproteobacteria
GTG
His
>WENV170606271
FUWD010639179
267868
Betaproteobacteria
GTG
His
>WENV170609345
FUWD011377733
267868
Betaproteobacteria
GTG
His
>WENV170620816
FUWD013040534
267868
Betaproteobacteria
GTG
His
>WENV170622970
FUWD013130137
267868
Betaproteobacteria
GTG
His
>WENV170628966
FUWD013257631
267868
Betaproteobacteria
GTG
His
>WENV170631204
FUWD013343247
267868
Betaproteobacteria
GTG
His
>WENV170620491
FUWD013032733
17915
Betaproteobacteria
GGA
Ser
>WENV170628635
FUWD013250185
17915
Betaproteobacteria
GGA
Ser
>WENV170599469
FUWD010075699
23831
Betaproteobacteria
TGA
Ser
>WENV170600280
FUWD010117858
23831
Betaproteobacteria
TGA
Ser
>WENV170602775
FUWD010263201
23831
Betaproteobacteria
TGA
Ser
>WENV170617636
FUWD012932904
23831
Betaproteobacteria
TGA
Ser
>WENV170625301
FUWD013195595
23831
Betaproteobacteria
TGA
Ser
>WENV170633541
FUWD013398366
23831
Betaproteobacteria
TGA
Ser
>WENV170606211
FUWD010632019
16529
Betaproteobacteria
GGA
Ser
>WENV170624888
FUWD013188414
16529
Betaproteobacteria
GGA
Ser
>WENV170616254
FUWD012882640
239247
Betaproteobacteria
CCA
Trp
>WENV170609094
FUWD011248598
4627
Betaproteobacteria
GCT
Ser
>WENV170602860
FUWD010270878
412422
Betaproteobacteria
GCA
Cys
>WENV170621312
FUWD013055203
37309
Betaproteobacteria
TAA
Leu
>WENV170624478
FUWD013182212
37309
Betaproteobacteria
TAA
Leu
>WENV170629489
FUWD013271637
37309
Betaproteobacteria
TAA
Leu
>WENV170632763
FUWD013387022
37309
Betaproteobacteria
TAA
Leu
>WENV170600061
FUWD010104591
412590
Betaproteobacteria
TCC
Gly
>WENV170617379
FUWD012923934
412590
Betaproteobacteria
TCC
Gly
>WENV170609111
FUWD011258506
63422
Betaproteobacteria
CAG
Leu
>WENV170600405
FUWD010123546
239253
Betaproteobacteria
CCG
Arg
>WENV170604211
FUWD010373938
239253
Betaproteobacteria
CCG
Arg
>WENV170616668
FUWD012896418
239253
Betaproteobacteria
CCG
Arg
>WENV170624525
FUWD013182677
239253
Betaproteobacteria
CCG
Arg
>WENV170632811
FUWD013387393
239253
Betaproteobacteria
CCG
Arg
>WENV170598892
FUWD010053738
239254
Betaproteobacteria
GTG
His
>WENV170619780
FUWD013021137
239254
Betaproteobacteria
GTG
His
>WENV170627899
FUWD013239380
239254
Betaproteobacteria
GTG
His
>WENV170598983
FUWD010057285
16843
Betaproteobacteria
GGA
Ser
>WENV170609424
FUWD011394834
16843
Betaproteobacteria
GGA
Ser
>WENV170599484
FUWD010076858
235909
Betaproteobacteria
GAT
Ile
>WENV170605224
FUWD010460453
160841
Betaproteobacteria
TTG
Gln
>WENV170600192
FUWD010113275
45127
Betaproteobacteria
CGA
Ser
>WENV170602843
FUWD010269990
45127
Betaproteobacteria
CGA
Ser
>WENV170625854
FUWD013207429
45127
Betaproteobacteria
CGA
Ser
>WENV170634073
FUWD013409126
45127
Betaproteobacteria
CGA
Ser
>WENV170605739
FUWD010531180
162620
Betaproteobacteria
ACG
Arg
>WENV170620631
FUWD013035698
236872
Betaproteobacteria
CCA
Trp
>WENV170628778
FUWD013253001
236872
Betaproteobacteria
CCA
Trp
>WENV170601277
FUWD010164998
238002
Betaproteobacteria
GCC
Gly
>WENV170625786
FUWD013205767
238002
Betaproteobacteria
GCC
Gly
>WENV170625788
FUWD013205768
238002
Betaproteobacteria
GCC
Gly
>WENV170634008
FUWD013407588
238002
Betaproteobacteria
GCC
Gly
>WENV170634010
FUWD013407589
238002
Betaproteobacteria
GCC
Gly
>WENV170622663
FUWD013115596
95723
Betaproteobacteria
CAG
Leu
>WENV170630877
FUWD013329399
95723
Betaproteobacteria
CAG
Leu
>WENV170605466
FUWD010490128
339519
Betaproteobacteria
CCT
Arg
>WENV170625862
FUWD013207739
148851
Betaproteobacteria
CAT
Met
>WENV170634079
FUWD013409413
148851
Betaproteobacteria
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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