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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
37 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183738660
PJUE01000066
149229
Betaproteobacteria
TCT
Arg
>WENV183739226
PJUE01003840
248752
Betaproteobacteria
GCC
Gly
>WENV183739227
PJUE01003840
248752
Betaproteobacteria
GCC
Gly
>WENV183739235
PJUE01004204
319206
Betaproteobacteria
TGC
Ala
>WENV183739490
PJUE01023797
339575
Betaproteobacteria
CAC
Val
>WENV183739181
PJUE01002721
146768
Betaproteobacteria
CAT
Met
>WENV183739180
PJUE01002699
267870
Betaproteobacteria
TTC
Glu
>WENV183739165
PJUE01002544
6005
Betaproteobacteria
GCT
Ser
>WENV183739200
PJUE01003051
412127
Betaproteobacteria
GCA
Cys
>WENV183739605
PJUE01039239
237682
Betaproteobacteria
CGT
Thr
>WENV183739455
PJUE01018712
147332
Betaproteobacteria
CAT
Met
>WENV183739138
PJUE01002211
145695
Betaproteobacteria
GGG
Pro
>WENV183739601
PJUE01038539
145695
Betaproteobacteria
GGG
Pro
>WENV183739416
PJUE01014777
316959
Betaproteobacteria
CTT
Lys
>WENV183739498
PJUE01024346
238346
Betaproteobacteria
CGT
Thr
>WENV183739461
PJUE01020141
17915
Betaproteobacteria
GGA
Ser
>WENV183739003
PJUE01000861
86049
Betaproteobacteria
GTA
Tyr
>WENV183738763
PJUE01000177
2139
Betaproteobacteria
>WENV183739083
PJUE01001502
338629
Betaproteobacteria
CAC
Val
>WENV183739307
PJUE01007108
147017
Betaproteobacteria
GAT
Ile
>WENV183739493
PJUE01024126
147017
Betaproteobacteria
GAT
Ile
>WENV183738819
PJUE01000255
387094
Betaproteobacteria
GGT
Thr
>WENV183739229
PJUE01003870
4869
Betaproteobacteria
GCT
Ser
>WENV183739337
PJUE01008787
198281
Betaproteobacteria
GAT
Ile
>WENV183739559
PJUE01031940
417724
Betaproteobacteria
CCC
Gly
>WENV183739049
PJUE01001207
147855
Betaproteobacteria
TTG
Gln
>WENV183739357
PJUE01010447
193916
Betaproteobacteria
TTG
Gln
>WENV183739409
PJUE01014591
193916
Betaproteobacteria
TTG
Gln
>WENV183739645
PJUE01047658
151824
Betaproteobacteria
TCT
Arg
>WENV183739050
PJUE01001231
253278
Betaproteobacteria
TTT
Lys
>WENV183739492
PJUE01024050
4907
Betaproteobacteria
GCT
Ser
>WENV183739277
PJUE01005794
304536
Betaproteobacteria
TGT
Thr
>WENV183739480
PJUE01022847
144934
Betaproteobacteria
TTG
Gln
>WENV183739662
PJUE01053018
109389
Betaproteobacteria
TAG
Leu
>WENV183739613
PJUE01040652
95723
Betaproteobacteria
CAG
Leu
>WENV183739231
PJUE01003964
389979
Betaproteobacteria
CCT
Arg
>WENV183739653
PJUE01051163
254339
Betaproteobacteria
GTG
His
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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