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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
197 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170022707
BCQK01038242
73113
Gammaproteobacteria
TAA
Leu
>WENV170022239
BCQK01002501
400836
Gammaproteobacteria
TTG
Gln
>WENV170022200
BCQK01001534
195786
Gammaproteobacteria
ACG
Arg
>WENV170023354
BCQK01238195
303732
Gammaproteobacteria
TGT
Thr
>WENV170022233
BCQK01002501
196873
Gammaproteobacteria
CAT
Met
>WENV170022237
BCQK01002501
196873
Gammaproteobacteria
CAT
Met
>WENV170022356
BCQK01006654
176628
Gammaproteobacteria
GGG
Pro
>WENV170022512
BCQK01017326
176628
Gammaproteobacteria
GGG
Pro
>WENV170022144
BCQK01000876
180042
Gammaproteobacteria
TGG
Pro
>WENV170022478
BCQK01013257
58707
Gammaproteobacteria
TGA
Ser
>WENV170022439
BCQK01011226
184467
Gammaproteobacteria
TCT
Arg
>WENV170022452
BCQK01012250
184467
Gammaproteobacteria
TCT
Arg
>WENV170022990
BCQK01096519
281229
Gammaproteobacteria
GTT
Asn
>WENV170022368
BCQK01007197
195351
Gammaproteobacteria
CAT
Met
>WENV170023424
BCQK01252484
195351
Gammaproteobacteria
CAT
Met
>WENV170023471
BCQK01261132
195351
Gammaproteobacteria
CAT
Met
>WENV170022217
BCQK01002100
195407
Gammaproteobacteria
GGG
Pro
>WENV170022786
BCQK01048434
195407
Gammaproteobacteria
GGG
Pro
>WENV170023438
BCQK01255795
195407
Gammaproteobacteria
GGG
Pro
>WENV170022235
BCQK01002501
413245
Gammaproteobacteria
TTG
Gln
>WENV170022236
BCQK01002501
413245
Gammaproteobacteria
TTG
Gln
>WENV170022728
BCQK01041010
29449
Gammaproteobacteria
CGA
Ser
>WENV170022709
BCQK01038698
480569
Gammaproteobacteria
CCC
Gly
>WENV170022313
BCQK01004853
401696
Gammaproteobacteria
TTG
Gln
>WENV170022458
BCQK01012497
401696
Gammaproteobacteria
TTG
Gln
>WENV170022711
BCQK01038994
401696
Gammaproteobacteria
TTG
Gln
>WENV170022359
BCQK01006778
29399
Gammaproteobacteria
GGA
Ser
>WENV170022831
BCQK01057474
303447
Gammaproteobacteria
GGC
Ala
>WENV170023356
BCQK01238926
303447
Gammaproteobacteria
GGC
Ala
>WENV170023404
BCQK01249748
303447
Gammaproteobacteria
GGC
Ala
>WENV170023461
BCQK01259724
303447
Gammaproteobacteria
GGC
Ala
>WENV170023484
BCQK01262711
303447
Gammaproteobacteria
GGC
Ala
>WENV170023449
BCQK01257493
307357
Gammaproteobacteria
TGC
Ala
>WENV170023385
BCQK01246654
307357
Gammaproteobacteria
TGC
Ala
>WENV170023112
BCQK01129460
307357
Gammaproteobacteria
TGC
Ala
>WENV170023040
BCQK01109490
307357
Gammaproteobacteria
TGC
Ala
>WENV170022944
BCQK01082678
307357
Gammaproteobacteria
TGC
Ala
>WENV170023026
BCQK01105963
307357
Gammaproteobacteria
TGC
Ala
>WENV170022896
BCQK01073404
281282
Gammaproteobacteria
TTC
Glu
>WENV170022298
BCQK01004343
301619
Gammaproteobacteria
CTT
Lys
>WENV170022246
BCQK01002751
486335
Gammaproteobacteria
TCC
Gly
>WENV170023219
BCQK01165739
313571
Gammaproteobacteria
GCC
Gly
>WENV170022441
BCQK01011226
117929
Gammaproteobacteria
TAG
Leu
>WENV170022602
BCQK01025506
73532
Gammaproteobacteria
CAA
Leu
>WENV170023247
BCQK01178311
280672
Gammaproteobacteria
GGT
Thr
>WENV170022377
BCQK01007888
280668
Gammaproteobacteria
GTT
Asn
>WENV170022378
BCQK01007888
280668
Gammaproteobacteria
GTT
Asn
>WENV170022379
BCQK01007888
280668
Gammaproteobacteria
GTT
Asn
>WENV170022380
BCQK01007888
280668
Gammaproteobacteria
GTT
Asn
>WENV170022381
BCQK01007888
280668
Gammaproteobacteria
GTT
Asn
>WENV170022888
BCQK01070976
313549
Gammaproteobacteria
GTG
His
>WENV170022245
BCQK01002751
122036
Gammaproteobacteria
GTA
Tyr
>WENV170023087
BCQK01123779
122036
Gammaproteobacteria
GTA
Tyr
>WENV170023088
BCQK01123779
122036
Gammaproteobacteria
GTA
Tyr
>WENV170023089
BCQK01123779
122036
Gammaproteobacteria
GTA
Tyr
>WENV170023190
BCQK01153423
122036
Gammaproteobacteria
GTA
Tyr
>WENV170023191
BCQK01153423
122036
Gammaproteobacteria
GTA
Tyr
>WENV170023318
BCQK01218059
122036
Gammaproteobacteria
GTA
Tyr
>WENV170023458
BCQK01259047
122036
Gammaproteobacteria
GTA
Tyr
>WENV170023499
BCQK01265011
122036
Gammaproteobacteria
GTA
Tyr
>WENV170022440
BCQK01011226
313525
Gammaproteobacteria
GTG
His
>WENV170022514
BCQK01017555
56151
Gammaproteobacteria
TGA
Ser
>WENV170023518
BCQK01267535
303448
Gammaproteobacteria
>WENV170023491
BCQK01263761
303448
Gammaproteobacteria
>WENV170023476
BCQK01261680
303448
Gammaproteobacteria
>WENV170023433
BCQK01254116
303448
Gammaproteobacteria
>WENV170022214
BCQK01001784
303448
Gammaproteobacteria
>WENV170022980
BCQK01095269
303448
Gammaproteobacteria
>WENV170023378
BCQK01244793
303448
Gammaproteobacteria
>WENV170023389
BCQK01247046
303448
Gammaproteobacteria
>WENV170023410
BCQK01250305
303448
Gammaproteobacteria
>WENV170023414
BCQK01250725
303448
Gammaproteobacteria
>WENV170023425
BCQK01252653
303448
Gammaproteobacteria
>WENV170023426
BCQK01252653
303448
Gammaproteobacteria
>WENV170022411
BCQK01009930
197506
Gammaproteobacteria
CAT
Met
>WENV170022788
BCQK01049075
197506
Gammaproteobacteria
CAT
Met
>WENV170023158
BCQK01140168
197506
Gammaproteobacteria
CAT
Met
>WENV170023353
BCQK01237861
197506
Gammaproteobacteria
CAT
Met
>WENV170022215
BCQK01001784
481206
Gammaproteobacteria
GCA
Cys
>WENV170022981
BCQK01095269
481206
Gammaproteobacteria
GCA
Cys
>WENV170023375
BCQK01244432
481206
Gammaproteobacteria
GCA
Cys
>WENV170022167
BCQK01001093
289050
Gammaproteobacteria
CCA
Trp
>WENV170022518
BCQK01017853
289050
Gammaproteobacteria
CCA
Trp
>WENV170022231
BCQK01002462
184266
Gammaproteobacteria
GAC
Val
>WENV170022263
BCQK01003204
184266
Gammaproteobacteria
GAC
Val
>WENV170022265
BCQK01003307
184266
Gammaproteobacteria
GAC
Val
>WENV170022702
BCQK01037666
184266
Gammaproteobacteria
GAC
Val
>WENV170023440
BCQK01256108
184266
Gammaproteobacteria
GAC
Val
>WENV170023488
BCQK01263504
184266
Gammaproteobacteria
GAC
Val
>WENV170023396
BCQK01249090
196986
Gammaproteobacteria
GAC
Val
>WENV170023289
BCQK01203661
196986
Gammaproteobacteria
GAC
Val
>WENV170022314
BCQK01004891
196986
Gammaproteobacteria
GAC
Val
>WENV170022385
BCQK01008389
196986
Gammaproteobacteria
GAC
Val
>WENV170023257
BCQK01183537
196986
Gammaproteobacteria
GAC
Val
>WENV170023407
BCQK01250187
196986
Gammaproteobacteria
GAC
Val
>WENV170023408
BCQK01250187
196986
Gammaproteobacteria
GAC
Val
>WENV170023439
BCQK01256036
196986
Gammaproteobacteria
GAC
Val
>WENV170023021
BCQK01105046
102898
Gammaproteobacteria
TAA
Leu
>WENV170023104
BCQK01127119
102898
Gammaproteobacteria
TAA
Leu
>WENV170023308
BCQK01212623
102898
Gammaproteobacteria
TAA
Leu
>WENV170023316
BCQK01216663
102898
Gammaproteobacteria
TAA
Leu
>WENV170023376
BCQK01244432
102898
Gammaproteobacteria
TAA
Leu
>WENV170023514
BCQK01267107
102898
Gammaproteobacteria
TAA
Leu
>WENV170022685
BCQK01036063
281436
Gammaproteobacteria
TGC
Ala
>WENV170022371
BCQK01007335
196872
Gammaproteobacteria
CCA
Trp
>WENV170022899
BCQK01074191
196872
Gammaproteobacteria
CCA
Trp
>WENV170023313
BCQK01213722
196872
Gammaproteobacteria
CCA
Trp
>WENV170023355
BCQK01238717
196872
Gammaproteobacteria
CCA
Trp
>WENV170023413
BCQK01250627
196872
Gammaproteobacteria
CCA
Trp
>WENV170023492
BCQK01263778
196872
Gammaproteobacteria
CCA
Trp
>WENV170023523
BCQK01268748
196872
Gammaproteobacteria
CCA
Trp
>WENV170023527
BCQK01268928
196872
Gammaproteobacteria
CCA
Trp
>WENV170023530
BCQK01269842
196872
Gammaproteobacteria
CCA
Trp
>WENV170022486
BCQK01015359
73161
Gammaproteobacteria
CAG
Leu
>WENV170022829
BCQK01057432
195170
Gammaproteobacteria
CAT
Met
>WENV170022584
BCQK01022818
412370
Gammaproteobacteria
>WENV170023122
BCQK01130466
281352
Gammaproteobacteria
TGT
Thr
>WENV170022971
BCQK01091002
118322
Gammaproteobacteria
TAA
Leu
>WENV170022553
BCQK01019950
32356
Gammaproteobacteria
TGA
Ser
>WENV170022897
BCQK01073670
32356
Gammaproteobacteria
TGA
Ser
>WENV170023265
BCQK01189552
32356
Gammaproteobacteria
TGA
Ser
>WENV170023287
BCQK01203157
32356
Gammaproteobacteria
TGA
Ser
>WENV170023314
BCQK01213765
32356
Gammaproteobacteria
TGA
Ser
>WENV170023379
BCQK01245728
32356
Gammaproteobacteria
TGA
Ser
>WENV170023509
BCQK01266503
32356
Gammaproteobacteria
TGA
Ser
>WENV170023549
BCQK01272642
32356
Gammaproteobacteria
TGA
Ser
>WENV170023552
BCQK01272984
32356
Gammaproteobacteria
TGA
Ser
>WENV170023553
BCQK01273000
32356
Gammaproteobacteria
TGA
Ser
>WENV170022926
BCQK01078419
205770
Gammaproteobacteria
ACG
Arg
>WENV170022927
BCQK01078419
205770
Gammaproteobacteria
ACG
Arg
>WENV170022647
BCQK01030275
199656
Gammaproteobacteria
ACG
Arg
>WENV170022648
BCQK01030275
199656
Gammaproteobacteria
ACG
Arg
>WENV170022649
BCQK01030275
199656
Gammaproteobacteria
ACG
Arg
>WENV170022270
BCQK01003451
282632
Gammaproteobacteria
TAC
Val
>WENV170022271
BCQK01003451
282632
Gammaproteobacteria
TAC
Val
>WENV170022272
BCQK01003451
282632
Gammaproteobacteria
TAC
Val
>WENV170022273
BCQK01003451
282632
Gammaproteobacteria
TAC
Val
>WENV170022274
BCQK01003451
282632
Gammaproteobacteria
TAC
Val
>WENV170022275
BCQK01003451
282632
Gammaproteobacteria
TAC
Val
>WENV170022281
BCQK01003597
77669
Gammaproteobacteria
GAG
Leu
>WENV170022818
BCQK01054738
77669
Gammaproteobacteria
GAG
Leu
>WENV170023068
BCQK01116531
77669
Gammaproteobacteria
GAG
Leu
>WENV170022125
BCQK01000354
302291
Gammaproteobacteria
GAA
Phe
>WENV170022751
BCQK01044556
302291
Gammaproteobacteria
GAA
Phe
>WENV170022654
BCQK01030956
29777
Gammaproteobacteria
GGA
Ser
>WENV170022667
BCQK01032874
29777
Gammaproteobacteria
GGA
Ser
>WENV170023031
BCQK01108070
205778
Gammaproteobacteria
GTC
Asp
>WENV170022183
BCQK01001360
196876
Gammaproteobacteria
CCG
Arg
>WENV170022806
BCQK01052292
32355
Gammaproteobacteria
GGA
Ser
>WENV170023128
BCQK01131842
481686
Gammaproteobacteria
CCC
Gly
>WENV170022346
BCQK01006154
176301
Gammaproteobacteria
GAT
Ile
>WENV170022462
BCQK01012909
123094
Gammaproteobacteria
GTA
Tyr
>WENV170022130
BCQK01000511
283964
Gammaproteobacteria
TTT
Lys
>WENV170022131
BCQK01000511
283964
Gammaproteobacteria
TTT
Lys
>WENV170022596
BCQK01024167
283964
Gammaproteobacteria
TTT
Lys
>WENV170022840
BCQK01059437
283964
Gammaproteobacteria
TTT
Lys
>WENV170022841
BCQK01059437
283964
Gammaproteobacteria
TTT
Lys
>WENV170022842
BCQK01059437
283964
Gammaproteobacteria
TTT
Lys
>WENV170022987
BCQK01096378
283964
Gammaproteobacteria
TTT
Lys
>WENV170022988
BCQK01096378
283964
Gammaproteobacteria
TTT
Lys
>WENV170023123
BCQK01130696
283964
Gammaproteobacteria
TTT
Lys
>WENV170023141
BCQK01134648
283964
Gammaproteobacteria
TTT
Lys
>WENV170023142
BCQK01134648
283964
Gammaproteobacteria
TTT
Lys
>WENV170023202
BCQK01156821
283964
Gammaproteobacteria
TTT
Lys
>WENV170023203
BCQK01156821
283964
Gammaproteobacteria
TTT
Lys
>WENV170023482
BCQK01262074
283964
Gammaproteobacteria
TTT
Lys
>WENV170023487
BCQK01263277
283964
Gammaproteobacteria
TTT
Lys
>WENV170023507
BCQK01266452
283964
Gammaproteobacteria
TTT
Lys
>WENV170023512
BCQK01266811
283964
Gammaproteobacteria
TTT
Lys
>WENV170023519
BCQK01267559
283964
Gammaproteobacteria
TTT
Lys
>WENV170023546
BCQK01272484
283964
Gammaproteobacteria
TTT
Lys
>WENV170023556
BCQK01273495
283964
Gammaproteobacteria
TTT
Lys
>WENV170023529
BCQK01269813
205795
Gammaproteobacteria
GAT
Ile
>WENV170023456
BCQK01258720
205795
Gammaproteobacteria
GAT
Ile
>WENV170023377
BCQK01244605
205795
Gammaproteobacteria
GAT
Ile
>WENV170023374
BCQK01244160
205795
Gammaproteobacteria
GAT
Ile
>WENV170023347
BCQK01233858
205795
Gammaproteobacteria
GAT
Ile
>WENV170022090
BCQK01000083
196874
Gammaproteobacteria
TGG
Pro
>WENV170022185
BCQK01001360
179133
Gammaproteobacteria
TGG
Pro
>WENV170022186
BCQK01001360
179133
Gammaproteobacteria
TGG
Pro
>WENV170022201
BCQK01001534
184287
Gammaproteobacteria
ACG
Arg
>WENV170022202
BCQK01001534
184287
Gammaproteobacteria
ACG
Arg
>WENV170022204
BCQK01001534
184287
Gammaproteobacteria
ACG
Arg
>WENV170022389
BCQK01008598
117930
Gammaproteobacteria
CAA
Leu
>WENV170022499
BCQK01016075
117930
Gammaproteobacteria
CAA
Leu
>WENV170022975
BCQK01092783
283624
Gammaproteobacteria
GTT
Asn
>WENV170022745
BCQK01043859
77394
Gammaproteobacteria
CAG
Leu
>WENV170022195
BCQK01001504
140909
Gammaproteobacteria
GTA
Tyr
>WENV170022631
BCQK01027934
179074
Gammaproteobacteria
CCT
Arg
>WENV170022234
BCQK01002501
118510
Gammaproteobacteria
TAG
Leu
>WENV170022238
BCQK01002501
118510
Gammaproteobacteria
TAG
Leu
>WENV170022199
BCQK01001534
14403
Gammaproteobacteria
GCT
Ser
>WENV170022203
BCQK01001534
14403
Gammaproteobacteria
GCT
Ser
>WENV170022145
BCQK01000876
196875
Gammaproteobacteria
TCT
Arg
>WENV170023256
BCQK01182642
74718
Gammaproteobacteria
GAG
Leu
>WENV170023331
BCQK01226057
74718
Gammaproteobacteria
GAG
Leu
>WENV170022454
BCQK01012250
118321
Gammaproteobacteria
TAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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