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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
51 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170739190
LULQ01000001
201940
Alphaproteobacteria
CAT
Met
>WENV170739192
LULQ01000001
192131
Alphaproteobacteria
GTC
Asp
>WENV170739194
LULQ01000001
282977
Alphaproteobacteria
CAT
Met
>WENV170739197
LULQ01000001
193463
Alphaproteobacteria
CCT
Arg
>WENV170739212
LULQ01000002
118150
Alphaproteobacteria
TAG
Leu
>WENV170739215
LULQ01000002
20437
Alphaproteobacteria
GGA
Ser
>WENV170739216
LULQ01000003
400517
Alphaproteobacteria
GGT
Thr
>WENV170739217
LULQ01000003
481802
Alphaproteobacteria
TCC
Gly
>WENV170739222
LULQ01000007
282981
Alphaproteobacteria
CCA
Trp
>WENV170739226
LULQ01000007
427571
Alphaproteobacteria
GCC
Gly
>WENV170739228
LULQ01000010
480900
Alphaproteobacteria
GCA
Cys
>WENV170739238
LULQ01000031
400384
Alphaproteobacteria
TTC
Glu
>WENV170739240
LULQ01000037
401037
Alphaproteobacteria
TTG
Gln
>WENV170739243
LULQ01000042
399480
Alphaproteobacteria
GAA
Phe
>WENV170739244
LULQ01000042
400029
Alphaproteobacteria
GGT
Thr
>WENV170739247
LULQ01000045
179639
Alphaproteobacteria
ACG
Arg
>WENV170739249
LULQ01000049
97838
Alphaproteobacteria
GAG
Leu
>WENV170739250
LULQ01000052
282658
Alphaproteobacteria
CGT
Thr
>WENV170739251
LULQ01000052
283257
Alphaproteobacteria
TTT
Lys
>WENV170739256
LULQ01000058
487436
Alphaproteobacteria
TCC
Gly
>WENV170739264
LULQ01000073
179841
Alphaproteobacteria
CCT
Arg
>WENV170739265
LULQ01000074
184691
Alphaproteobacteria
GTG
His
>WENV170739268
LULQ01000079
398996
Alphaproteobacteria
GCC
Gly
>WENV170739269
LULQ01000079
398996
Alphaproteobacteria
GCC
Gly
>WENV170739270
LULQ01000080
29598
Alphaproteobacteria
GGA
Ser
>WENV170739272
LULQ01000080
453762
Alphaproteobacteria
CAC
Val
>WENV170739314
LULQ01000184
435083
Alphaproteobacteria
>WENV170739315
LULQ01000200
29495
Alphaproteobacteria
GCT
Ser
>WENV170739326
LULQ01000271
143406
Alphaproteobacteria
TAG
Leu
>WENV170739338
LULQ01000308
353624
Alphaproteobacteria
CCA
Trp
>WENV170739348
LULQ01000362
176146
Alphaproteobacteria
CAT
Met
>WENV170739349
LULQ01000362
398994
Alphaproteobacteria
GTT
Asn
>WENV170739426
LULQ01001203
481048
Alphaproteobacteria
GCA
Cys
>WENV170739431
LULQ01001268
286018
Alphaproteobacteria
CCA
Trp
>WENV170739523
LULQ01002744
435083
Alphaproteobacteria
>WENV170739528
LULQ01002800
234327
Alphaproteobacteria
GAT
Ile
>WENV170739529
LULQ01002800
368481
Alphaproteobacteria
TGC
Ala
>WENV170739534
LULQ01002888
29655
Alphaproteobacteria
TGA
Ser
>WENV170739587
LULQ01004194
314617
Alphaproteobacteria
TAC
Val
>WENV170739630
LULQ01005732
481073
Alphaproteobacteria
CTG
Gln
>WENV170739648
LULQ01006354
422170
Alphaproteobacteria
GGT
Thr
>WENV170739684
LULQ01007691
118247
Alphaproteobacteria
CAA
Leu
>WENV170739707
LULQ01009178
481074
Alphaproteobacteria
TCC
Gly
>WENV170739736
LULQ01010821
29495
Alphaproteobacteria
GCT
Ser
>WENV170739788
LULQ01014743
481268
Alphaproteobacteria
TCC
Gly
>WENV170739796
LULQ01015227
212319
Alphaproteobacteria
GTG
His
>WENV170739833
LULQ01018916
29627
Alphaproteobacteria
GGA
Ser
>WENV170739850
LULQ01021347
197241
Alphaproteobacteria
GGG
Pro
>WENV170739868
LULQ01023187
122202
Alphaproteobacteria
GTA
Tyr
>WENV170739897
LULQ01028323
178576
Alphaproteobacteria
ACG
Arg
>WENV170739904
LULQ01030103
353624
Alphaproteobacteria
CCA
Trp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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