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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
59 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183580503
OOCN01000059
113702
Actinomycetota
TAA
Leu
>WENV183580598
OOCN01000141
145345
Actinomycetota
TAC
Val
>WENV183580630
OOCN01000169
163948
Actinomycetota
CAT
Met
>WENV183580680
OOCN01000241
144595
Actinomycetota
CAA
Leu
>WENV183580682
OOCN01000242
243162
Actinomycetota
GTT
Asn
>WENV183580724
OOCN01000304
153948
Actinomycetota
GGG
Pro
>WENV183580742
OOCN01000360
235174
Actinomycetota
TGC
Ala
>WENV183580759
OOCN01000392
201717
Actinomycetota
CTT
Lys
>WENV183580772
OOCN01000431
158513
Actinomycetota
TGG
Pro
>WENV183580800
OOCN01000531
235173
Actinomycetota
GGC
Ala
>WENV183580801
OOCN01000531
413665
Actinomycetota
TTG
Gln
>WENV183580804
OOCN01000538
313386
Actinomycetota
CGT
Thr
>WENV183580805
OOCN01000538
113703
Actinomycetota
TAG
Leu
>WENV183580806
OOCN01000538
235146
Actinomycetota
CGT
Thr
>WENV183580810
OOCN01000547
235121
Actinomycetota
CGT
Thr
>WENV183580811
OOCN01000547
113703
Actinomycetota
TAG
Leu
>WENV183580825
OOCN01000575
53078
Actinomycetota
GGA
Ser
>WENV183580831
OOCN01000608
95593
Actinomycetota
>WENV183580837
OOCN01000626
237794
Actinomycetota
CCG
Arg
>WENV183580857
OOCN01000727
16400
Actinomycetota
GAG
Leu
>WENV183580861
OOCN01000744
235153
Actinomycetota
CCT
Arg
>WENV183580863
OOCN01000750
237792
Actinomycetota
CCT
Arg
>WENV183580888
OOCN01000826
338139
Actinomycetota
GTT
Asn
>WENV183580892
OOCN01000850
80622
Actinomycetota
CAG
Leu
>WENV183580893
OOCN01000850
411554
Actinomycetota
CCC
Gly
>WENV183580911
OOCN01000923
235348
Actinomycetota
CCT
Arg
>WENV183580938
OOCN01001113
144823
Actinomycetota
TCT
Arg
>WENV183580946
OOCN01001144
144660
Actinomycetota
TAC
Val
>WENV183580957
OOCN01001218
45147
Actinomycetota
CGA
Ser
>WENV183580968
OOCN01001295
51286
Actinomycetota
TGA
Ser
>WENV183580976
OOCN01001328
267574
Actinomycetota
CAC
Val
>WENV183580977
OOCN01001328
235173
Actinomycetota
GGC
Ala
>WENV183580978
OOCN01001330
414234
Actinomycetota
CTG
Gln
>WENV183581010
OOCN01001469
235199
Actinomycetota
CAC
Val
>WENV183581019
OOCN01001615
144825
Actinomycetota
CAT
Met
>WENV183581022
OOCN01001651
23370
Actinomycetota
GCT
Ser
>WENV183581043
OOCN01001795
412399
Actinomycetota
CCC
Gly
>WENV183581059
OOCN01001899
121510
Actinomycetota
TAA
Leu
>WENV183581069
OOCN01001940
295695
Actinomycetota
CTC
Glu
>WENV183581070
OOCN01001940
338148
Actinomycetota
CTG
Gln
>WENV183581089
OOCN01002398
95593
Actinomycetota
>WENV183581090
OOCN01002398
144700
Actinomycetota
CAT
Met
>WENV183581091
OOCN01002403
235194
Actinomycetota
GTG
His
>WENV183581098
OOCN01002500
44855
Actinomycetota
TGA
Ser
>WENV183581128
OOCN01003016
44862
Actinomycetota
CGA
Ser
>WENV183581131
OOCN01003061
144636
Actinomycetota
GAT
Ile
>WENV183581140
OOCN01003269
245301
Actinomycetota
GCC
Gly
>WENV183581157
OOCN01003815
254857
Actinomycetota
CCG
Arg
>WENV183581199
OOCN01005330
121514
Actinomycetota
TAA
Leu
>WENV183581202
OOCN01005430
163948
Actinomycetota
CAT
Met
>WENV183581209
OOCN01005730
38674
Actinomycetota
CGA
Ser
>WENV183581219
OOCN01006046
16222
Actinomycetota
GAG
Leu
>WENV183581260
OOCN01009559
144826
Actinomycetota
GGG
Pro
>WENV183581282
OOCN01011082
158720
Actinomycetota
ACG
Arg
>WENV183581290
OOCN01012099
16467
Actinomycetota
GCT
Ser
>WENV183581294
OOCN01013333
338239
Actinomycetota
TTC
Glu
>WENV183581319
OOCN01017088
147732
Actinomycetota
GTC
Asp
>WENV183581320
OOCN01017729
235347
Actinomycetota
GGC
Ala
>WENV183581326
OOCN01018103
44851
Actinomycetota
TGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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