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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
107 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183534253
OOAE01036878
158247
Bacillota
>WENV183533596
OOAE01001019
144612
Bacillota
TCT
Arg
>WENV183533783
OOAE01002236
144612
Bacillota
TCT
Arg
>WENV183533922
OOAE01004174
144612
Bacillota
TCT
Arg
>WENV183534265
OOAE01041142
144612
Bacillota
TCT
Arg
>WENV183533439
OOAE01000542
154063
Bacillota
CGG
Pro
>WENV183533360
OOAE01000324
267556
Bacillota
TAC
Val
>WENV183533484
OOAE01000675
235098
Bacillota
GAC
Val
>WENV183533518
OOAE01000756
235098
Bacillota
GAC
Val
>WENV183533661
OOAE01001332
235098
Bacillota
GAC
Val
>WENV183534031
OOAE01007564
235098
Bacillota
GAC
Val
>WENV183534195
OOAE01023832
338152
Bacillota
TTC
Glu
>WENV183534019
OOAE01006751
44854
Bacillota
TGA
Ser
>WENV183533549
OOAE01000841
44854
Bacillota
TGA
Ser
>WENV183533390
OOAE01000415
44854
Bacillota
TGA
Ser
>WENV183533568
OOAE01000958
235154
Bacillota
GTT
Asn
>WENV183534294
OOAE01048510
144577
Bacillota
GAT
Ile
>WENV183533379
OOAE01000383
59312
Bacillota
CAG
Leu
>WENV183533416
OOAE01000466
338147
Bacillota
CTC
Glu
>WENV183533415
OOAE01000466
338147
Bacillota
CTC
Glu
>WENV183533414
OOAE01000466
338147
Bacillota
CTC
Glu
>WENV183534329
OOAE01059322
235150
Bacillota
TGC
Ala
>WENV183533995
OOAE01005797
182792
Bacillota
GTC
Asp
>WENV183533779
OOAE01002211
182792
Bacillota
GTC
Asp
>WENV183533547
OOAE01000835
11034
Bacillota
GGA
Ser
>WENV183533838
OOAE01002960
274189
Bacillota
TGT
Thr
>WENV183533257
OOAE01000177
235079
Bacillota
GAA
Phe
>WENV183534293
OOAE01048510
235087
Bacillota
TGC
Ala
>WENV183534021
OOAE01006968
338149
Bacillota
CTC
Glu
>WENV183534014
OOAE01006636
338149
Bacillota
CTC
Glu
>WENV183533545
OOAE01000831
338149
Bacillota
CTC
Glu
>WENV183533630
OOAE01001154
37269
Bacillota
TGA
Ser
>WENV183533151
OOAE01000027
37269
Bacillota
TGA
Ser
>WENV183534088
OOAE01011329
155089
Bacillota
CAT
Met
>WENV183533361
OOAE01000324
162445
Bacillota
CAT
Met
>WENV183533741
OOAE01001861
152492
Bacillota
GGG
Pro
>WENV183533121
OOAE01000010
152492
Bacillota
GGG
Pro
>WENV183533933
OOAE01004350
235078
Bacillota
TAC
Val
>WENV183533255
OOAE01000177
235078
Bacillota
TAC
Val
>WENV183533767
OOAE01002153
100326
Bacillota
GTA
Tyr
>WENV183533934
OOAE01004350
240017
Bacillota
GCC
Gly
>WENV183533494
OOAE01000697
240017
Bacillota
GCC
Gly
>WENV183533737
OOAE01001820
411547
Bacillota
CTG
Gln
>WENV183533636
OOAE01001198
411547
Bacillota
CTG
Gln
>WENV183533603
OOAE01001039
411547
Bacillota
CTG
Gln
>WENV183533125
OOAE01000012
147684
Bacillota
ACG
Arg
>WENV183533672
OOAE01001334
147684
Bacillota
ACG
Arg
>WENV183533487
OOAE01000683
147684
Bacillota
ACG
Arg
>WENV183534020
OOAE01006751
4624
Bacillota
GCT
Ser
>WENV183533550
OOAE01000841
4624
Bacillota
GCT
Ser
>WENV183533391
OOAE01000415
4624
Bacillota
GCT
Ser
>WENV183533591
OOAE01001013
263765
Bacillota
TAC
Val
>WENV183533493
OOAE01000697
263765
Bacillota
TAC
Val
>WENV183534255
OOAE01038188
412387
Bacillota
GCA
Cys
>WENV183533632
OOAE01001171
248683
Bacillota
TTT
Lys
>WENV183533996
OOAE01005797
235095
Bacillota
GGT
Thr
>WENV183533780
OOAE01002211
235095
Bacillota
GGT
Thr
>WENV183533743
OOAE01001895
235095
Bacillota
GGT
Thr
>WENV183533474
OOAE01000640
235095
Bacillota
GGT
Thr
>WENV183533607
OOAE01001063
241471
Bacillota
TGC
Ala
>WENV183533953
OOAE01004765
185292
Bacillota
ACG
Arg
>WENV183534247
OOAE01035613
419639
Bacillota
GCA
Cys
>WENV183533721
OOAE01001578
411549
Bacillota
TTG
Gln
>WENV183533718
OOAE01001568
411549
Bacillota
TTG
Gln
>WENV183533972
OOAE01005062
148188
Bacillota
CCG
Arg
>WENV183533887
OOAE01003608
148188
Bacillota
CCG
Arg
>WENV183533730
OOAE01001708
148188
Bacillota
CCG
Arg
>WENV183533640
OOAE01001208
163943
Bacillota
GTC
Asp
>WENV183534224
OOAE01031886
241432
Bacillota
TGT
Thr
>WENV183534016
OOAE01006694
235124
Bacillota
TGG
Pro
>WENV183533728
OOAE01001675
235124
Bacillota
TGG
Pro
>WENV183533714
OOAE01001557
235124
Bacillota
TGG
Pro
>WENV183534156
OOAE01017365
338129
Bacillota
TGT
Thr
>WENV183533455
OOAE01000569
144583
Bacillota
ACG
Arg
>WENV183534046
OOAE01008751
247734
Bacillota
TGC
Ala
>WENV183533869
OOAE01003392
419877
Bacillota
TCC
Gly
>WENV183534138
OOAE01015736
235171
Bacillota
CCA
Trp
>WENV183533994
OOAE01005797
235171
Bacillota
CCA
Trp
>WENV183533778
OOAE01002211
235171
Bacillota
CCA
Trp
>WENV183534022
OOAE01006968
144621
Bacillota
GTT
Asn
>WENV183534015
OOAE01006636
144621
Bacillota
GTT
Asn
>WENV183533799
OOAE01002456
144621
Bacillota
GTT
Asn
>WENV183533546
OOAE01000831
144621
Bacillota
GTT
Asn
>WENV183533555
OOAE01000870
243098
Bacillota
GGT
Thr
>WENV183533785
OOAE01002236
58712
Bacillota
CAG
Leu
>WENV183533766
OOAE01002151
58712
Bacillota
CAG
Leu
>WENV183533534
OOAE01000794
245296
Bacillota
CCC
Gly
>WENV183533383
OOAE01000398
245296
Bacillota
CCC
Gly
>WENV183533515
OOAE01000753
344240
Bacillota
GCC
Gly
>WENV183534069
OOAE01009739
242686
Bacillota
TGC
Ala
>WENV183533828
OOAE01002812
178024
Bacillota
TCT
Arg
>WENV183533770
OOAE01002166
144594
Bacillota
CAC
Val
>WENV183533764
OOAE01002145
144594
Bacillota
CAC
Val
>WENV183533701
OOAE01001479
338127
Bacillota
TTG
Gln
>WENV183533127
OOAE01000012
272488
Bacillota
GAA
Phe
>WENV183534067
OOAE01009381
114075
Bacillota
TAG
Leu
>WENV183533763
OOAE01002136
238945
Bacillota
GCC
Gly
>WENV183533635
OOAE01001173
238945
Bacillota
GCC
Gly
>WENV183533548
OOAE01000836
238945
Bacillota
GCC
Gly
>WENV183533352
OOAE01000300
238945
Bacillota
GCC
Gly
>WENV183533273
OOAE01000198
273862
Bacillota
TGC
Ala
>WENV183534061
OOAE01009084
338207
Bacillota
TTC
Glu
>WENV183533914
OOAE01004032
338128
Bacillota
TTC
Glu
>WENV183533859
OOAE01003257
338128
Bacillota
TTC
Glu
>WENV183533675
OOAE01001350
338128
Bacillota
TTC
Glu
>WENV183533498
OOAE01000706
338128
Bacillota
TTC
Glu
>WENV183533757
OOAE01002084
245344
Bacillota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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