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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
141 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183540461
OOAJ01038054
158247
Bacillota
>WENV183539949
OOAJ01001172
147684
Bacillota
ACG
Arg
>WENV183539882
OOAJ01000807
144583
Bacillota
ACG
Arg
>WENV183540252
OOAJ01006674
144594
Bacillota
CAC
Val
>WENV183540175
OOAJ01003748
144594
Bacillota
CAC
Val
>WENV183539812
OOAJ01000476
144594
Bacillota
CAC
Val
>WENV183540389
OOAJ01020467
58712
Bacillota
CAG
Leu
>WENV183540302
OOAJ01008916
58712
Bacillota
CAG
Leu
>WENV183540162
OOAJ01003536
58712
Bacillota
CAG
Leu
>WENV183540142
OOAJ01003300
58712
Bacillota
CAG
Leu
>WENV183539976
OOAJ01001298
58712
Bacillota
CAG
Leu
>WENV183539953
OOAJ01001197
58712
Bacillota
CAG
Leu
>WENV183539823
OOAJ01000525
58712
Bacillota
CAG
Leu
>WENV183540418
OOAJ01026078
169968
Bacillota
CAT
Met
>WENV183540241
OOAJ01006109
235171
Bacillota
CCA
Trp
>WENV183540325
OOAJ01011007
245296
Bacillota
CCC
Gly
>WENV183540220
OOAJ01005223
245296
Bacillota
CCC
Gly
>WENV183539707
OOAJ01000200
245296
Bacillota
CCC
Gly
>WENV183540306
OOAJ01009165
148188
Bacillota
CCG
Arg
>WENV183540139
OOAJ01003241
148188
Bacillota
CCG
Arg
>WENV183540045
OOAJ01001837
148188
Bacillota
CCG
Arg
>WENV183539903
OOAJ01000937
148188
Bacillota
CCG
Arg
>WENV183540400
OOAJ01022390
245298
Bacillota
CGG
Pro
>WENV183540115
OOAJ01002787
245298
Bacillota
CGG
Pro
>WENV183539843
OOAJ01000570
245298
Bacillota
CGG
Pro
>WENV183540363
OOAJ01015087
338149
Bacillota
CTC
Glu
>WENV183540261
OOAJ01006981
338149
Bacillota
CTC
Glu
>WENV183540171
OOAJ01003699
338149
Bacillota
CTC
Glu
>WENV183540106
OOAJ01002666
338149
Bacillota
CTC
Glu
>WENV183539800
OOAJ01000430
338149
Bacillota
CTC
Glu
>WENV183539920
OOAJ01001035
239080
Bacillota
CTG
Gln
>WENV183540399
OOAJ01022390
411547
Bacillota
CTG
Gln
>WENV183540303
OOAJ01008917
411547
Bacillota
CTG
Gln
>WENV183540273
OOAJ01007438
411547
Bacillota
CTG
Gln
>WENV183540114
OOAJ01002787
411547
Bacillota
CTG
Gln
>WENV183539842
OOAJ01000570
411547
Bacillota
CTG
Gln
>WENV183539615
OOAJ01000080
411547
Bacillota
CTG
Gln
>WENV183539524
OOAJ01000007
411547
Bacillota
CTG
Gln
>WENV183540123
OOAJ01002927
344183
Bacillota
CTG
Gln
>WENV183540383
OOAJ01019188
238910
Bacillota
CTT
Lys
>WENV183540364
OOAJ01015087
272992
Bacillota
CTT
Lys
>WENV183540348
OOAJ01013291
272992
Bacillota
CTT
Lys
>WENV183540107
OOAJ01002666
272992
Bacillota
CTT
Lys
>WENV183539799
OOAJ01000430
272992
Bacillota
CTT
Lys
>WENV183539778
OOAJ01000369
239076
Bacillota
GAA
Phe
>WENV183539719
OOAJ01000231
239076
Bacillota
GAA
Phe
>WENV183540426
OOAJ01027097
235079
Bacillota
GAA
Phe
>WENV183540423
OOAJ01027096
235079
Bacillota
GAA
Phe
>WENV183540300
OOAJ01008829
235079
Bacillota
GAA
Phe
>WENV183540054
OOAJ01001968
235079
Bacillota
GAA
Phe
>WENV183539987
OOAJ01001407
238974
Bacillota
GAA
Phe
>WENV183539813
OOAJ01000478
235098
Bacillota
GAC
Val
>WENV183539995
OOAJ01001452
235098
Bacillota
GAC
Val
>WENV183540074
OOAJ01002145
235098
Bacillota
GAC
Val
>WENV183540083
OOAJ01002306
235098
Bacillota
GAC
Val
>WENV183540116
OOAJ01002815
235098
Bacillota
GAC
Val
>WENV183540184
OOAJ01004071
235098
Bacillota
GAC
Val
>WENV183540275
OOAJ01007478
235098
Bacillota
GAC
Val
>WENV183540286
OOAJ01007977
235098
Bacillota
GAC
Val
>WENV183540403
OOAJ01022442
201704
Bacillota
GAT
Ile
>WENV183540317
OOAJ01010064
295714
Bacillota
GCC
Gly
>WENV183539650
OOAJ01000132
340265
Bacillota
GCC
Gly
>WENV183539649
OOAJ01000132
340265
Bacillota
GCC
Gly
>WENV183539618
OOAJ01000083
340265
Bacillota
GCC
Gly
>WENV183539935
OOAJ01001101
240017
Bacillota
GCC
Gly
>WENV183539678
OOAJ01000158
240017
Bacillota
GCC
Gly
>WENV183539674
OOAJ01000158
240017
Bacillota
GCC
Gly
>WENV183540296
OOAJ01008621
4624
Bacillota
GCT
Ser
>WENV183539994
OOAJ01001447
4624
Bacillota
GCT
Ser
>WENV183540282
OOAJ01007814
11034
Bacillota
GGA
Ser
>WENV183540231
OOAJ01005670
11034
Bacillota
GGA
Ser
>WENV183539978
OOAJ01001315
11034
Bacillota
GGA
Ser
>WENV183539764
OOAJ01000317
11034
Bacillota
GGA
Ser
>WENV183540427
OOAJ01027144
10680
Bacillota
GGA
Ser
>WENV183540465
OOAJ01039008
152492
Bacillota
GGG
Pro
>WENV183539891
OOAJ01000833
235095
Bacillota
GGT
Thr
>WENV183539890
OOAJ01000829
235095
Bacillota
GGT
Thr
>WENV183539888
OOAJ01000829
235095
Bacillota
GGT
Thr
>WENV183539856
OOAJ01000611
235095
Bacillota
GGT
Thr
>WENV183539854
OOAJ01000611
235095
Bacillota
GGT
Thr
>WENV183539754
OOAJ01000297
235095
Bacillota
GGT
Thr
>WENV183540267
OOAJ01007164
100326
Bacillota
GTA
Tyr
>WENV183540307
OOAJ01009300
80612
Bacillota
GTA
Tyr
>WENV183540272
OOAJ01007320
80612
Bacillota
GTA
Tyr
>WENV183539753
OOAJ01000297
196621
Bacillota
GTC
Asp
>WENV183539855
OOAJ01000611
196621
Bacillota
GTC
Asp
>WENV183539889
OOAJ01000829
196621
Bacillota
GTC
Asp
>WENV183540257
OOAJ01006843
196621
Bacillota
GTC
Asp
>WENV183540425
OOAJ01027097
196621
Bacillota
GTC
Asp
>WENV183539777
OOAJ01000369
148348
Bacillota
GTC
Asp
>WENV183539718
OOAJ01000231
148348
Bacillota
GTC
Asp
>WENV183540431
OOAJ01028589
149041
Bacillota
GTC
Asp
>WENV183540450
OOAJ01033177
144599
Bacillota
GTC
Asp
>WENV183539572
OOAJ01000037
243646
Bacillota
GTT
Asn
>WENV183539573
OOAJ01000037
235697
Bacillota
GTT
Asn
>WENV183539571
OOAJ01000037
296878
Bacillota
GTT
Asn
>WENV183540309
OOAJ01009332
144621
Bacillota
GTT
Asn
>WENV183540262
OOAJ01006981
144621
Bacillota
GTT
Asn
>WENV183540172
OOAJ01003699
144621
Bacillota
GTT
Asn
>WENV183540100
OOAJ01002620
144621
Bacillota
GTT
Asn
>WENV183539892
OOAJ01000851
144621
Bacillota
GTT
Asn
>WENV183539801
OOAJ01000430
144621
Bacillota
GTT
Asn
>WENV183539633
OOAJ01000115
144621
Bacillota
GTT
Asn
>WENV183540173
OOAJ01003711
41154
Bacillota
TAA
Leu
>WENV183540424
OOAJ01027097
235117
Bacillota
TAC
Val
>WENV183539932
OOAJ01001101
235078
Bacillota
TAC
Val
>WENV183539675
OOAJ01000158
235078
Bacillota
TAC
Val
>WENV183539671
OOAJ01000158
235078
Bacillota
TAC
Val
>WENV183539779
OOAJ01000369
239079
Bacillota
TAC
Val
>WENV183539776
OOAJ01000369
239079
Bacillota
TAC
Val
>WENV183539647
OOAJ01000132
239079
Bacillota
TAC
Val
>WENV183540451
OOAJ01033177
254433
Bacillota
TAC
Val
>WENV183540263
OOAJ01007089
114075
Bacillota
TAG
Leu
>WENV183539705
OOAJ01000197
144612
Bacillota
TCT
Arg
>WENV183539990
OOAJ01001428
144612
Bacillota
TCT
Arg
>WENV183540037
OOAJ01001710
144612
Bacillota
TCT
Arg
>WENV183540070
OOAJ01002133
144612
Bacillota
TCT
Arg
>WENV183540093
OOAJ01002516
144612
Bacillota
TCT
Arg
>WENV183540295
OOAJ01008621
44854
Bacillota
TGA
Ser
>WENV183539993
OOAJ01001447
44854
Bacillota
TGA
Ser
>WENV183540388
OOAJ01020181
235137
Bacillota
TGC
Ala
>WENV183540040
OOAJ01001827
247734
Bacillota
TGC
Ala
>WENV183540190
OOAJ01004196
292012
Bacillota
TGC
Ala
>WENV183540244
OOAJ01006188
273862
Bacillota
TGC
Ala
>WENV183540342
OOAJ01011813
235124
Bacillota
TGG
Pro
>WENV183540294
OOAJ01008615
235124
Bacillota
TGG
Pro
>WENV183539963
OOAJ01001239
235124
Bacillota
TGG
Pro
>WENV183539904
OOAJ01000959
235124
Bacillota
TGG
Pro
>WENV183540433
OOAJ01028589
239832
Bacillota
TGT
Thr
>WENV183540004
OOAJ01001506
338129
Bacillota
TGT
Thr
>WENV183539996
OOAJ01001455
338129
Bacillota
TGT
Thr
>WENV183540349
OOAJ01013542
338152
Bacillota
TTC
Glu
>WENV183539646
OOAJ01000132
340263
Bacillota
TTC
Glu
>WENV183539725
OOAJ01000231
340263
Bacillota
TTC
Glu
>WENV183539775
OOAJ01000369
340263
Bacillota
TTC
Glu
>WENV183540102
OOAJ01002640
338128
Bacillota
TTC
Glu
>WENV183540082
OOAJ01002284
338128
Bacillota
TTC
Glu
>WENV183539950
OOAJ01001176
411549
Bacillota
TTG
Gln
>WENV183539898
OOAJ01000874
411549
Bacillota
TTG
Gln
>WENV183539774
OOAJ01000369
239078
Bacillota
TTT
Lys
>WENV183539645
OOAJ01000132
239078
Bacillota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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