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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
97 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183548137
OOAW01001501
256380
Bacillota
>WENV183548356
OOAW01007796
147639
Bacillota
ACG
Arg
>WENV183548417
OOAW01014811
147135
Bacillota
ACG
Arg
>WENV183548440
OOAW01017822
147684
Bacillota
ACG
Arg
>WENV183547698
OOAW01000060
144583
Bacillota
ACG
Arg
>WENV183548374
OOAW01010041
114002
Bacillota
CAA
Leu
>WENV183547797
OOAW01000122
144594
Bacillota
CAC
Val
>WENV183548108
OOAW01001175
58831
Bacillota
CAG
Leu
>WENV183547892
OOAW01000254
58712
Bacillota
CAG
Leu
>WENV183547890
OOAW01000251
58712
Bacillota
CAG
Leu
>WENV183548318
OOAW01004871
342895
Bacillota
CAT
Met
>WENV183548439
OOAW01017679
152491
Bacillota
CAT
Met
>WENV183548049
OOAW01000720
148188
Bacillota
CCG
Arg
>WENV183548427
OOAW01016391
154063
Bacillota
CGG
Pro
>WENV183547822
OOAW01000145
245298
Bacillota
CGG
Pro
>WENV183548091
OOAW01001023
147749
Bacillota
CGG
Pro
>WENV183548294
OOAW01003714
258685
Bacillota
CGT
Thr
>WENV183548348
OOAW01007572
256115
Bacillota
CGT
Thr
>WENV183548337
OOAW01005933
341763
Bacillota
CTC
Glu
>WENV183547926
OOAW01000295
338149
Bacillota
CTC
Glu
>WENV183547913
OOAW01000275
338149
Bacillota
CTC
Glu
>WENV183548003
OOAW01000523
235929
Bacillota
CTG
Gln
>WENV183547821
OOAW01000145
411547
Bacillota
CTG
Gln
>WENV183547648
OOAW01000032
411547
Bacillota
CTG
Gln
>WENV183547927
OOAW01000295
272992
Bacillota
CTT
Lys
>WENV183547912
OOAW01000275
272992
Bacillota
CTT
Lys
>WENV183547815
OOAW01000145
235079
Bacillota
GAA
Phe
>WENV183547677
OOAW01000048
235079
Bacillota
GAA
Phe
>WENV183548391
OOAW01011883
250349
Bacillota
GAA
Phe
>WENV183547810
OOAW01000140
245344
Bacillota
GAA
Phe
>WENV183547625
OOAW01000025
245344
Bacillota
GAA
Phe
>WENV183547795
OOAW01000122
235098
Bacillota
GAC
Val
>WENV183547641
OOAW01000030
235098
Bacillota
GAC
Val
>WENV183548165
OOAW01001657
411743
Bacillota
GCA
Cys
>WENV183548360
OOAW01007897
412387
Bacillota
GCA
Cys
>WENV183548325
OOAW01005359
412387
Bacillota
GCA
Cys
>WENV183547812
OOAW01000140
419639
Bacillota
GCA
Cys
>WENV183548129
OOAW01001428
241441
Bacillota
GCC
Gly
>WENV183547861
OOAW01000203
344240
Bacillota
GCC
Gly
>WENV183547811
OOAW01000140
344240
Bacillota
GCC
Gly
>WENV183547576
OOAW01000012
344240
Bacillota
GCC
Gly
>WENV183548111
OOAW01001207
238945
Bacillota
GCC
Gly
>WENV183547818
OOAW01000145
249259
Bacillota
GCC
Gly
>WENV183547816
OOAW01000145
249259
Bacillota
GCC
Gly
>WENV183547678
OOAW01000048
249259
Bacillota
GCC
Gly
>WENV183547674
OOAW01000048
249259
Bacillota
GCC
Gly
>WENV183548343
OOAW01006871
338131
Bacillota
GCC
Gly
>WENV183548312
OOAW01004588
16834
Bacillota
GCT
Ser
>WENV183547643
OOAW01000030
4624
Bacillota
GCT
Ser
>WENV183548216
OOAW01002346
18852
Bacillota
GCT
Ser
>WENV183548246
OOAW01002670
6904
Bacillota
GCT
Ser
>WENV183548373
OOAW01009874
4674
Bacillota
GGA
Ser
>WENV183547736
OOAW01000077
11034
Bacillota
GGA
Ser
>WENV183547735
OOAW01000077
11034
Bacillota
GGA
Ser
>WENV183547734
OOAW01000077
11034
Bacillota
GGA
Ser
>WENV183547575
OOAW01000012
277200
Bacillota
GGC
Ala
>WENV183548404
OOAW01012908
149024
Bacillota
GGT
Thr
>WENV183547747
OOAW01000086
235095
Bacillota
GGT
Thr
>WENV183547745
OOAW01000086
235095
Bacillota
GGT
Thr
>WENV183547703
OOAW01000061
243098
Bacillota
GGT
Thr
>WENV183548438
OOAW01017679
281472
Bacillota
GGT
Thr
>WENV183548385
OOAW01011508
144668
Bacillota
GTC
Asp
>WENV183547817
OOAW01000145
182792
Bacillota
GTC
Asp
>WENV183547746
OOAW01000086
182792
Bacillota
GTC
Asp
>WENV183547676
OOAW01000048
182792
Bacillota
GTC
Asp
>WENV183548390
OOAW01011883
235197
Bacillota
GTC
Asp
>WENV183548163
OOAW01001657
235919
Bacillota
GTG
His
>WENV183548276
OOAW01003285
156937
Bacillota
GTG
His
>WENV183548238
OOAW01002587
235154
Bacillota
GTT
Asn
>WENV183547914
OOAW01000275
144621
Bacillota
GTT
Asn
>WENV183547670
OOAW01000048
144621
Bacillota
GTT
Asn
>WENV183548083
OOAW01000998
24650
Bacillota
TAA
Leu
>WENV183548456
OOAW01021075
37111
Bacillota
TAA
Leu
>WENV183548134
OOAW01001479
267649
Bacillota
TAC
Val
>WENV183548386
OOAW01011508
267649
Bacillota
TAC
Val
>WENV183548327
OOAW01005546
267556
Bacillota
TAC
Val
>WENV183547675
OOAW01000048
235117
Bacillota
TAC
Val
>WENV183548344
OOAW01006968
114075
Bacillota
TAG
Leu
>WENV183547847
OOAW01000184
413152
Bacillota
TCC
Gly
>WENV183547739
OOAW01000079
144612
Bacillota
TCT
Arg
>WENV183548043
OOAW01000694
147674
Bacillota
TCT
Arg
>WENV183548200
OOAW01002113
144672
Bacillota
TCT
Arg
>WENV183548259
OOAW01002897
37213
Bacillota
TGA
Ser
>WENV183547642
OOAW01000030
44854
Bacillota
TGA
Ser
>WENV183548300
OOAW01003976
246023
Bacillota
TGC
Ala
>WENV183548413
OOAW01014349
235150
Bacillota
TGC
Ala
>WENV183548403
OOAW01012874
235137
Bacillota
TGC
Ala
>WENV183547796
OOAW01000122
235124
Bacillota
TGG
Pro
>WENV183548290
OOAW01003629
239832
Bacillota
TGT
Thr
>WENV183547738
OOAW01000078
338129
Bacillota
TGT
Thr
>WENV183547697
OOAW01000060
338128
Bacillota
TTC
Glu
>WENV183547998
OOAW01000516
339890
Bacillota
TTG
Gln
>WENV183548377
OOAW01010837
340802
Bacillota
TTG
Gln
>WENV183548277
OOAW01003285
340802
Bacillota
TTG
Gln
>WENV183547823
OOAW01000145
411549
Bacillota
TTG
Gln
>WENV183548351
OOAW01007796
239020
Bacillota
TTT
Lys
>WENV183548046
OOAW01000694
235127
Bacillota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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