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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
58 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183559546
OOBT01000042
37269
Bacillota
TGA
Ser
>WENV183559626
OOBT01000240
148239
Bacillota
TCT
Arg
>WENV183559627
OOBT01000240
156937
Bacillota
GTG
His
>WENV183559640
OOBT01000262
100326
Bacillota
GTA
Tyr
>WENV183559674
OOBT01000362
58712
Bacillota
CAG
Leu
>WENV183559680
OOBT01000376
274189
Bacillota
TGT
Thr
>WENV183559685
OOBT01000386
272488
Bacillota
GAA
Phe
>WENV183559704
OOBT01000443
238974
Bacillota
GAA
Phe
>WENV183559715
OOBT01000531
272992
Bacillota
CTT
Lys
>WENV183559716
OOBT01000531
338149
Bacillota
CTC
Glu
>WENV183559717
OOBT01000531
144621
Bacillota
GTT
Asn
>WENV183559718
OOBT01000545
11034
Bacillota
GGA
Ser
>WENV183559732
OOBT01000603
158247
Bacillota
>WENV183559740
OOBT01000663
114075
Bacillota
TAG
Leu
>WENV183559783
OOBT01000995
338129
Bacillota
TGT
Thr
>WENV183559795
OOBT01001046
411547
Bacillota
CTG
Gln
>WENV183559796
OOBT01001046
245298
Bacillota
CGG
Pro
>WENV183559808
OOBT01001121
148188
Bacillota
CCG
Arg
>WENV183559856
OOBT01001526
144594
Bacillota
CAC
Val
>WENV183559864
OOBT01001580
144583
Bacillota
ACG
Arg
>WENV183559866
OOBT01001595
144612
Bacillota
TCT
Arg
>WENV183559880
OOBT01001670
144599
Bacillota
GTC
Asp
>WENV183559881
OOBT01001670
302150
Bacillota
TAC
Val
>WENV183559906
OOBT01001935
235098
Bacillota
GAC
Val
>WENV183559917
OOBT01002041
44859
Bacillota
AAG
Leu
>WENV183559985
OOBT01002931
235095
Bacillota
GGT
Thr
>WENV183560011
OOBT01003317
144612
Bacillota
TCT
Arg
>WENV183560055
OOBT01004435
411549
Bacillota
TTG
Gln
>WENV183560056
OOBT01004438
163943
Bacillota
GTC
Asp
>WENV183560092
OOBT01005209
235078
Bacillota
TAC
Val
>WENV183560095
OOBT01005209
240017
Bacillota
GCC
Gly
>WENV183560107
OOBT01005486
235124
Bacillota
TGG
Pro
>WENV183560119
OOBT01005834
338147
Bacillota
CTC
Glu
>WENV183560139
OOBT01006671
235142
Bacillota
CTT
Lys
>WENV183560151
OOBT01007274
100326
Bacillota
GTA
Tyr
>WENV183560162
OOBT01007556
239080
Bacillota
CTG
Gln
>WENV183560176
OOBT01008149
235697
Bacillota
GTT
Asn
>WENV183560202
OOBT01009894
299139
Bacillota
TGC
Ala
>WENV183560214
OOBT01010377
148188
Bacillota
CCG
Arg
>WENV183560225
OOBT01011092
245296
Bacillota
CCC
Gly
>WENV183560228
OOBT01011408
239078
Bacillota
TTT
Lys
>WENV183560229
OOBT01011408
340263
Bacillota
TTC
Glu
>WENV183560230
OOBT01011408
304759
Bacillota
TAC
Val
>WENV183560231
OOBT01011409
235294
Bacillota
TGC
Ala
>WENV183560282
OOBT01016740
263765
Bacillota
TAC
Val
>WENV183560287
OOBT01017163
235150
Bacillota
TGC
Ala
>WENV183560292
OOBT01018440
44854
Bacillota
TGA
Ser
>WENV183560293
OOBT01018440
4624
Bacillota
GCT
Ser
>WENV183560309
OOBT01019957
338128
Bacillota
TTC
Glu
>WENV183560312
OOBT01020306
196621
Bacillota
GTC
Asp
>WENV183560324
OOBT01021143
144766
Bacillota
CAT
Met
>WENV183560326
OOBT01021143
163753
Bacillota
TGG
Pro
>WENV183560351
OOBT01025726
201667
Bacillota
TCT
Arg
>WENV183560356
OOBT01026849
238910
Bacillota
CTT
Lys
>WENV183560368
OOBT01029011
173314
Bacillota
GAT
Ile
>WENV183560392
OOBT01034478
235171
Bacillota
CCA
Trp
>WENV183560397
OOBT01036674
235638
Bacillota
GAA
Phe
>WENV183560398
OOBT01036674
376360
Bacillota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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