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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
92 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183572743
OOCG01000160
144612
Bacillota
TCT
Arg
>WENV183572822
OOCG01000351
235098
Bacillota
GAC
Val
>WENV183572850
OOCG01000464
235098
Bacillota
GAC
Val
>WENV183572856
OOCG01000479
235098
Bacillota
GAC
Val
>WENV183573114
OOCG01002579
148239
Bacillota
TCT
Arg
>WENV183572803
OOCG01000294
44854
Bacillota
TGA
Ser
>WENV183572855
OOCG01000471
241441
Bacillota
GCC
Gly
>WENV183573236
OOCG01007482
148348
Bacillota
GTC
Asp
>WENV183573184
OOCG01004659
246023
Bacillota
TGC
Ala
>WENV183573187
OOCG01004837
235150
Bacillota
TGC
Ala
>WENV183573285
OOCG01010403
235137
Bacillota
TGC
Ala
>WENV183572956
OOCG01000891
341763
Bacillota
CTC
Glu
>WENV183572971
OOCG01001066
11034
Bacillota
GGA
Ser
>WENV183572942
OOCG01000846
11034
Bacillota
GGA
Ser
>WENV183573237
OOCG01007482
239076
Bacillota
GAA
Phe
>WENV183573281
OOCG01010289
274189
Bacillota
TGT
Thr
>WENV183573051
OOCG01001797
245298
Bacillota
CGG
Pro
>WENV183572876
OOCG01000591
245298
Bacillota
CGG
Pro
>WENV183573318
OOCG01014959
380750
Bacillota
TGT
Thr
>WENV183572908
OOCG01000719
287000
Bacillota
GTT
Asn
>WENV183573176
OOCG01004471
169968
Bacillota
CAT
Met
>WENV183573058
OOCG01001881
413152
Bacillota
TCC
Gly
>WENV183573183
OOCG01004659
201704
Bacillota
GAT
Ile
>WENV183572884
OOCG01000606
144599
Bacillota
GTC
Asp
>WENV183573191
OOCG01005042
153911
Bacillota
GAT
Ile
>WENV183573085
OOCG01002124
144610
Bacillota
GTG
His
>WENV183573306
OOCG01013496
411547
Bacillota
CTG
Gln
>WENV183573269
OOCG01008800
411547
Bacillota
CTG
Gln
>WENV183573227
OOCG01006932
411547
Bacillota
CTG
Gln
>WENV183573155
OOCG01003852
411547
Bacillota
CTG
Gln
>WENV183572998
OOCG01001267
411547
Bacillota
CTG
Gln
>WENV183572875
OOCG01000591
411547
Bacillota
CTG
Gln
>WENV183572804
OOCG01000294
4624
Bacillota
GCT
Ser
>WENV183572829
OOCG01000390
248683
Bacillota
TTT
Lys
>WENV183573255
OOCG01008091
235095
Bacillota
GGT
Thr
>WENV183573251
OOCG01007951
235095
Bacillota
GGT
Thr
>WENV183573070
OOCG01001953
235095
Bacillota
GGT
Thr
>WENV183572980
OOCG01001130
235095
Bacillota
GGT
Thr
>WENV183572712
OOCG01000081
235095
Bacillota
GGT
Thr
>WENV183573244
OOCG01007523
241471
Bacillota
TGC
Ala
>WENV183572754
OOCG01000190
419639
Bacillota
GCA
Cys
>WENV183573317
OOCG01014959
235289
Bacillota
GTT
Asn
>WENV183573295
OOCG01011359
411549
Bacillota
TTG
Gln
>WENV183573030
OOCG01001647
411549
Bacillota
TTG
Gln
>WENV183572964
OOCG01000986
411549
Bacillota
TTG
Gln
>WENV183573280
OOCG01010262
148188
Bacillota
CCG
Arg
>WENV183573257
OOCG01008457
148188
Bacillota
CCG
Arg
>WENV183573074
OOCG01001995
148188
Bacillota
CCG
Arg
>WENV183573125
OOCG01002842
80612
Bacillota
GTA
Tyr
>WENV183572860
OOCG01000494
256380
Bacillota
>WENV183573242
OOCG01007482
84171
Bacillota
GAG
Leu
>WENV183573210
OOCG01005777
298620
Bacillota
CAT
Met
>WENV183572934
OOCG01000813
241432
Bacillota
TGT
Thr
>WENV183573208
OOCG01005512
235124
Bacillota
TGG
Pro
>WENV183573157
OOCG01003876
235124
Bacillota
TGG
Pro
>WENV183573107
OOCG01002475
235124
Bacillota
TGG
Pro
>WENV183572944
OOCG01000860
235124
Bacillota
TGG
Pro
>WENV183572928
OOCG01000804
235124
Bacillota
TGG
Pro
>WENV183572885
OOCG01000606
254433
Bacillota
TAC
Val
>WENV183572993
OOCG01001242
338129
Bacillota
TGT
Thr
>WENV183572807
OOCG01000302
338129
Bacillota
TGT
Thr
>WENV183573067
OOCG01001920
157838
Bacillota
GTC
Asp
>WENV183573234
OOCG01007482
347851
Bacillota
TTC
Glu
>WENV183573011
OOCG01001417
235171
Bacillota
CCA
Trp
>WENV183573091
OOCG01002178
238974
Bacillota
GAA
Phe
>WENV183572878
OOCG01000606
238974
Bacillota
GAA
Phe
>WENV183572794
OOCG01000274
144621
Bacillota
GTT
Asn
>WENV183572709
OOCG01000071
243098
Bacillota
GGT
Thr
>WENV183573147
OOCG01003454
58712
Bacillota
CAG
Leu
>WENV183572924
OOCG01000780
58712
Bacillota
CAG
Leu
>WENV183573079
OOCG01002117
245296
Bacillota
CCC
Gly
>WENV183572979
OOCG01001123
245296
Bacillota
CCC
Gly
>WENV183573298
OOCG01011805
272992
Bacillota
CTT
Lys
>WENV183573296
OOCG01011645
272992
Bacillota
CTT
Lys
>WENV183573120
OOCG01002709
272992
Bacillota
CTT
Lys
>WENV183572895
OOCG01000656
344240
Bacillota
GCC
Gly
>WENV183572753
OOCG01000190
344240
Bacillota
GCC
Gly
>WENV183572733
OOCG01000115
344240
Bacillota
GCC
Gly
>WENV183573063
OOCG01001905
196632
Bacillota
GTC
Asp
>WENV183572732
OOCG01000115
196632
Bacillota
GTC
Asp
>WENV183572933
OOCG01000810
178024
Bacillota
TCT
Arg
>WENV183573312
OOCG01014224
144594
Bacillota
CAC
Val
>WENV183573118
OOCG01002651
144594
Bacillota
CAC
Val
>WENV183573171
OOCG01004429
272488
Bacillota
GAA
Phe
>WENV183573158
OOCG01003990
272488
Bacillota
GAA
Phe
>WENV183573071
OOCG01001969
272488
Bacillota
GAA
Phe
>WENV183572918
OOCG01000749
272488
Bacillota
GAA
Phe
>WENV183573199
OOCG01005309
114075
Bacillota
TAG
Leu
>WENV183573333
OOCG01019066
338128
Bacillota
TTC
Glu
>WENV183573127
OOCG01002973
338128
Bacillota
TTC
Glu
>WENV183572970
OOCG01001039
245344
Bacillota
GAA
Phe
>WENV183572752
OOCG01000190
245344
Bacillota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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