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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
90 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183576012
OOCI01019751
24650
Bacillota
TAA
Leu
>WENV183575781
OOCI01008027
196621
Bacillota
GTC
Asp
>WENV183576111
OOCI01030529
155958
Bacillota
GAT
Ile
>WENV183575697
OOCI01005590
309417
Bacillota
GGC
Ala
>WENV183575162
OOCI01000537
155113
Bacillota
CGG
Pro
>WENV183575493
OOCI01002576
144612
Bacillota
TCT
Arg
>WENV183575518
OOCI01002746
144612
Bacillota
TCT
Arg
>WENV183574820
OOCI01000032
235134
Bacillota
GAA
Phe
>WENV183575823
OOCI01009099
156189
Bacillota
GAT
Ile
>WENV183575687
OOCI01005345
235098
Bacillota
GAC
Val
>WENV183575470
OOCI01002272
235098
Bacillota
GAC
Val
>WENV183575143
OOCI01000493
340263
Bacillota
TTC
Glu
>WENV183575744
OOCI01006852
44854
Bacillota
TGA
Ser
>WENV183575589
OOCI01003598
44854
Bacillota
TGA
Ser
>WENV183576125
OOCI01032338
235154
Bacillota
GTT
Asn
>WENV183575145
OOCI01000493
148348
Bacillota
GTC
Asp
>WENV183575820
OOCI01008970
304022
Bacillota
GCC
Gly
>WENV183576008
OOCI01019308
246023
Bacillota
TGC
Ala
>WENV183575054
OOCI01000267
59312
Bacillota
CAG
Leu
>WENV183574861
OOCI01000054
59312
Bacillota
CAG
Leu
>WENV183575508
OOCI01002670
239080
Bacillota
CTG
Gln
>WENV183576009
OOCI01019346
338147
Bacillota
CTC
Glu
>WENV183575378
OOCI01001462
338147
Bacillota
CTC
Glu
>WENV183575094
OOCI01000359
338147
Bacillota
CTC
Glu
>WENV183575089
OOCI01000349
338147
Bacillota
CTC
Glu
>WENV183576227
OOCI01050238
235150
Bacillota
TGC
Ala
>WENV183575112
OOCI01000396
235114
Bacillota
TTT
Lys
>WENV183575306
OOCI01001064
429429
Bacillota
CCA
Trp
>WENV183574860
OOCI01000054
44859
Bacillota
AAG
Leu
>WENV183574859
OOCI01000054
44859
Bacillota
AAG
Leu
>WENV183575462
OOCI01002241
11034
Bacillota
GGA
Ser
>WENV183575418
OOCI01001803
11034
Bacillota
GGA
Ser
>WENV183575146
OOCI01000493
239076
Bacillota
GAA
Phe
>WENV183576113
OOCI01030749
156937
Bacillota
GTG
His
>WENV183575819
OOCI01008970
235079
Bacillota
GAA
Phe
>WENV183575664
OOCI01004838
340265
Bacillota
GCC
Gly
>WENV183575922
OOCI01012834
235087
Bacillota
TGC
Ala
>WENV183576228
OOCI01050381
173314
Bacillota
GAT
Ile
>WENV183575909
OOCI01012090
338149
Bacillota
CTC
Glu
>WENV183575660
OOCI01004788
245298
Bacillota
CGG
Pro
>WENV183575157
OOCI01000525
413152
Bacillota
TCC
Gly
>WENV183575283
OOCI01000962
152149
Bacillota
GTG
His
>WENV183576007
OOCI01019308
201704
Bacillota
GAT
Ile
>WENV183574807
OOCI01000026
235078
Bacillota
TAC
Val
>WENV183576094
OOCI01027921
153911
Bacillota
GAT
Ile
>WENV183574974
OOCI01000167
100326
Bacillota
GTA
Tyr
>WENV183574821
OOCI01000032
240017
Bacillota
GCC
Gly
>WENV183575729
OOCI01006331
411547
Bacillota
CTG
Gln
>WENV183575659
OOCI01004788
411547
Bacillota
CTG
Gln
>WENV183575745
OOCI01006852
4624
Bacillota
GCT
Ser
>WENV183575590
OOCI01003598
4624
Bacillota
GCT
Ser
>WENV183574818
OOCI01000032
263765
Bacillota
TAC
Val
>WENV183576191
OOCI01042258
412387
Bacillota
GCA
Cys
>WENV183575782
OOCI01008027
235095
Bacillota
GGT
Thr
>WENV183575553
OOCI01003180
235095
Bacillota
GGT
Thr
>WENV183575218
OOCI01000721
344183
Bacillota
CTG
Gln
>WENV183575144
OOCI01000493
239079
Bacillota
TAC
Val
>WENV183575534
OOCI01002943
411549
Bacillota
TTG
Gln
>WENV183575198
OOCI01000648
235142
Bacillota
CTT
Lys
>WENV183575012
OOCI01000209
235142
Bacillota
CTT
Lys
>WENV183575701
OOCI01005656
148188
Bacillota
CCG
Arg
>WENV183575527
OOCI01002879
148188
Bacillota
CCG
Arg
>WENV183576010
OOCI01019472
80612
Bacillota
GTA
Tyr
>WENV183574982
OOCI01000183
256380
Bacillota
>WENV183574986
OOCI01000185
163943
Bacillota
GTC
Asp
>WENV183575261
OOCI01000858
298620
Bacillota
CAT
Met
>WENV183575920
OOCI01012754
235124
Bacillota
TGG
Pro
>WENV183575558
OOCI01003236
338129
Bacillota
TGT
Thr
>WENV183575966
OOCI01016074
157838
Bacillota
GTC
Asp
>WENV183575617
OOCI01004040
144583
Bacillota
ACG
Arg
>WENV183575891
OOCI01011346
247734
Bacillota
TGC
Ala
>WENV183575780
OOCI01008027
235171
Bacillota
CCA
Trp
>WENV183575935
OOCI01013446
144621
Bacillota
GTT
Asn
>WENV183575111
OOCI01000396
235113
Bacillota
GAA
Phe
>WENV183576280
OOCI01064466
243098
Bacillota
GGT
Thr
>WENV183575728
OOCI01006325
58712
Bacillota
CAG
Leu
>WENV183575471
OOCI01002278
245296
Bacillota
CCC
Gly
>WENV183575910
OOCI01012090
272992
Bacillota
CTT
Lys
>WENV183575142
OOCI01000493
239078
Bacillota
TTT
Lys
>WENV183575569
OOCI01003379
144594
Bacillota
CAC
Val
>WENV183575229
OOCI01000738
144594
Bacillota
CAC
Val
>WENV183575045
OOCI01000250
95563
Bacillota
GTA
Tyr
>WENV183575044
OOCI01000249
338127
Bacillota
TTG
Gln
>WENV183575119
OOCI01000413
414486
Bacillota
CCC
Gly
>WENV183574957
OOCI01000147
272488
Bacillota
GAA
Phe
>WENV183575025
OOCI01000219
114075
Bacillota
TAG
Leu
>WENV183575965
OOCI01016074
263523
Bacillota
TAC
Val
>WENV183576118
OOCI01031074
338128
Bacillota
TTC
Glu
>WENV183575486
OOCI01002457
338128
Bacillota
TTC
Glu
>WENV183575331
OOCI01001208
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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