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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
92 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183576389
OOCJ01000026
58712
Bacillota
CAG
Leu
>WENV183576410
OOCJ01000043
411547
Bacillota
CTG
Gln
>WENV183576451
OOCJ01000085
148239
Bacillota
TCT
Arg
>WENV183576452
OOCJ01000085
156937
Bacillota
GTG
His
>WENV183576461
OOCJ01000089
169968
Bacillota
CAT
Met
>WENV183576466
OOCJ01000095
58712
Bacillota
CAG
Leu
>WENV183576469
OOCJ01000099
144612
Bacillota
TCT
Arg
>WENV183576510
OOCJ01000156
338129
Bacillota
TGT
Thr
>WENV183576515
OOCJ01000166
235098
Bacillota
GAC
Val
>WENV183576516
OOCJ01000169
272992
Bacillota
CTT
Lys
>WENV183576526
OOCJ01000184
309417
Bacillota
GGC
Ala
>WENV183576534
OOCJ01000200
338149
Bacillota
CTC
Glu
>WENV183576535
OOCJ01000200
144621
Bacillota
GTT
Asn
>WENV183576541
OOCJ01000219
100326
Bacillota
GTA
Tyr
>WENV183576543
OOCJ01000219
238974
Bacillota
GAA
Phe
>WENV183576547
OOCJ01000230
80612
Bacillota
GTA
Tyr
>WENV183576550
OOCJ01000236
235171
Bacillota
CCA
Trp
>WENV183576551
OOCJ01000236
196621
Bacillota
GTC
Asp
>WENV183576552
OOCJ01000236
235095
Bacillota
GGT
Thr
>WENV183576553
OOCJ01000236
235095
Bacillota
GGT
Thr
>WENV183576554
OOCJ01000237
144583
Bacillota
ACG
Arg
>WENV183576572
OOCJ01000274
313164
Bacillota
TTT
Lys
>WENV183576576
OOCJ01000280
238974
Bacillota
GAA
Phe
>WENV183576603
OOCJ01000334
256380
Bacillota
>WENV183576626
OOCJ01000390
235124
Bacillota
TGG
Pro
>WENV183576630
OOCJ01000401
37269
Bacillota
TGA
Ser
>WENV183576661
OOCJ01000537
344240
Bacillota
GCC
Gly
>WENV183576664
OOCJ01000540
411549
Bacillota
TTG
Gln
>WENV183576665
OOCJ01000540
411547
Bacillota
CTG
Gln
>WENV183576666
OOCJ01000540
245298
Bacillota
CGG
Pro
>WENV183576680
OOCJ01000614
235079
Bacillota
GAA
Phe
>WENV183576681
OOCJ01000614
304022
Bacillota
GCC
Gly
>WENV183576708
OOCJ01000709
235098
Bacillota
GAC
Val
>WENV183576713
OOCJ01000739
414486
Bacillota
CCC
Gly
>WENV183576714
OOCJ01000740
114075
Bacillota
TAG
Leu
>WENV183576721
OOCJ01000765
11034
Bacillota
GGA
Ser
>WENV183576729
OOCJ01000843
344240
Bacillota
GCC
Gly
>WENV183576730
OOCJ01000856
277200
Bacillota
GGC
Ala
>WENV183576739
OOCJ01000949
144594
Bacillota
CAC
Val
>WENV183576748
OOCJ01001001
239080
Bacillota
CTG
Gln
>WENV183576754
OOCJ01001040
144621
Bacillota
GTT
Asn
>WENV183576759
OOCJ01001069
239078
Bacillota
TTT
Lys
>WENV183576760
OOCJ01001069
340263
Bacillota
TTC
Glu
>WENV183576761
OOCJ01001069
304759
Bacillota
TAC
Val
>WENV183576762
OOCJ01001069
148348
Bacillota
GTC
Asp
>WENV183576763
OOCJ01001069
239076
Bacillota
GAA
Phe
>WENV183576764
OOCJ01001069
304759
Bacillota
TAC
Val
>WENV183576768
OOCJ01001083
287000
Bacillota
GTT
Asn
>WENV183576773
OOCJ01001197
245296
Bacillota
CCC
Gly
>WENV183576808
OOCJ01001477
338131
Bacillota
GCC
Gly
>WENV183576809
OOCJ01001482
44854
Bacillota
TGA
Ser
>WENV183576810
OOCJ01001482
4624
Bacillota
GCT
Ser
>WENV183576823
OOCJ01001598
235079
Bacillota
GAA
Phe
>WENV183576824
OOCJ01001598
304022
Bacillota
GCC
Gly
>WENV183576825
OOCJ01001598
196621
Bacillota
GTC
Asp
>WENV183576826
OOCJ01001598
304022
Bacillota
GCC
Gly
>WENV183576847
OOCJ01001898
155089
Bacillota
CAT
Met
>WENV183576866
OOCJ01001983
243098
Bacillota
GGT
Thr
>WENV183576876
OOCJ01002039
340265
Bacillota
GCC
Gly
>WENV183576877
OOCJ01002067
296878
Bacillota
GTT
Asn
>WENV183576878
OOCJ01002067
235697
Bacillota
GTT
Asn
>WENV183576899
OOCJ01002415
240017
Bacillota
GCC
Gly
>WENV183576948
OOCJ01003344
245344
Bacillota
GAA
Phe
>WENV183576949
OOCJ01003344
344240
Bacillota
GCC
Gly
>WENV183576950
OOCJ01003344
419639
Bacillota
GCA
Cys
>WENV183576953
OOCJ01003435
100326
Bacillota
GTA
Tyr
>WENV183576972
OOCJ01003713
309417
Bacillota
GGC
Ala
>WENV183576999
OOCJ01005049
144612
Bacillota
TCT
Arg
>WENV183577030
OOCJ01005857
338128
Bacillota
TTC
Glu
>WENV183577034
OOCJ01006287
238910
Bacillota
CTT
Lys
>WENV183577045
OOCJ01006846
247734
Bacillota
TGC
Ala
>WENV183577088
OOCJ01009750
267649
Bacillota
TAC
Val
>WENV183577120
OOCJ01012824
235137
Bacillota
TGC
Ala
>WENV183577142
OOCJ01014527
37269
Bacillota
TGA
Ser
>WENV183577148
OOCJ01015955
307003
Bacillota
TGC
Ala
>WENV183577154
OOCJ01016434
153911
Bacillota
GAT
Ile
>WENV183577162
OOCJ01018952
148188
Bacillota
CCG
Arg
>WENV183577165
OOCJ01018953
198135
Bacillota
GAT
Ile
>WENV183577166
OOCJ01019243
148188
Bacillota
CCG
Arg
>WENV183577171
OOCJ01020037
235137
Bacillota
TGC
Ala
>WENV183577189
OOCJ01022180
247057
Bacillota
TGC
Ala
>WENV183577202
OOCJ01023224
241432
Bacillota
TGT
Thr
>WENV183577209
OOCJ01023496
340131
Bacillota
GTT
Asn
>WENV183577216
OOCJ01023609
293599
Bacillota
CTT
Lys
>WENV183577219
OOCJ01024959
429429
Bacillota
CCA
Trp
>WENV183577226
OOCJ01026577
340263
Bacillota
TTC
Glu
>WENV183577245
OOCJ01033613
235154
Bacillota
GTT
Asn
>WENV183577249
OOCJ01035867
287000
Bacillota
GTT
Asn
>WENV183577250
OOCJ01035867
338152
Bacillota
TTC
Glu
>WENV183577254
OOCJ01035997
267649
Bacillota
TAC
Val
>WENV183577257
OOCJ01037660
240017
Bacillota
GCC
Gly
>WENV183577270
OOCJ01042491
144599
Bacillota
GTC
Asp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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