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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
155 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183581025
OOCN01001653
196621
Bacillota
GTC
Asp
>WENV183580818
OOCN01000560
309417
Bacillota
GGC
Ala
>WENV183581146
OOCN01003349
309417
Bacillota
GGC
Ala
>WENV183581158
OOCN01003827
309417
Bacillota
GGC
Ala
>WENV183581217
OOCN01005954
309417
Bacillota
GGC
Ala
>WENV183580654
OOCN01000196
144612
Bacillota
TCT
Arg
>WENV183580668
OOCN01000219
144612
Bacillota
TCT
Arg
>WENV183580717
OOCN01000294
144612
Bacillota
TCT
Arg
>WENV183580719
OOCN01000294
144612
Bacillota
TCT
Arg
>WENV183581074
OOCN01002027
144612
Bacillota
TCT
Arg
>WENV183581006
OOCN01001458
235134
Bacillota
GAA
Phe
>WENV183581270
OOCN01010436
235287
Bacillota
TTT
Lys
>WENV183580901
OOCN01000894
235098
Bacillota
GAC
Val
>WENV183581081
OOCN01002170
235098
Bacillota
GAC
Val
>WENV183581110
OOCN01002682
235098
Bacillota
GAC
Val
>WENV183580708
OOCN01000266
340263
Bacillota
TTC
Glu
>WENV183580485
OOCN01000048
340263
Bacillota
TTC
Glu
>WENV183580945
OOCN01001137
23769
Bacillota
TAA
Leu
>WENV183581049
OOCN01001825
148239
Bacillota
TCT
Arg
>WENV183580528
OOCN01000070
148239
Bacillota
TCT
Arg
>WENV183581265
OOCN01009957
44854
Bacillota
TGA
Ser
>WENV183581172
OOCN01004431
44854
Bacillota
TGA
Ser
>WENV183581056
OOCN01001893
44854
Bacillota
TGA
Ser
>WENV183580602
OOCN01000146
44854
Bacillota
TGA
Ser
>WENV183580734
OOCN01000329
425593
Bacillota
CCC
Gly
>WENV183580557
OOCN01000096
37549
Bacillota
TAA
Leu
>WENV183581066
OOCN01001924
435985
Bacillota
TCC
Gly
>WENV183580701
OOCN01000266
148348
Bacillota
GTC
Asp
>WENV183580410
OOCN01000005
304022
Bacillota
GCC
Gly
>WENV183581344
OOCN01021495
246023
Bacillota
TGC
Ala
>WENV183581381
OOCN01034017
354367
Bacillota
TTG
Gln
>WENV183580502
OOCN01000058
59312
Bacillota
CAG
Leu
>WENV183580764
OOCN01000408
193585
Bacillota
CGG
Pro
>WENV183580762
OOCN01000408
193585
Bacillota
CGG
Pro
>WENV183580728
OOCN01000312
239080
Bacillota
CTG
Gln
>WENV183580579
OOCN01000121
243119
Bacillota
CTT
Lys
>WENV183580408
OOCN01000004
338147
Bacillota
CTC
Glu
>WENV183580407
OOCN01000004
338147
Bacillota
CTC
Glu
>WENV183580406
OOCN01000004
338147
Bacillota
CTC
Glu
>WENV183581346
OOCN01021554
235150
Bacillota
TGC
Ala
>WENV183580573
OOCN01000114
152047
Bacillota
GGG
Pro
>WENV183580785
OOCN01000465
16820
Bacillota
GCT
Ser
>WENV183581051
OOCN01001825
340802
Bacillota
TTG
Gln
>WENV183580475
OOCN01000037
293599
Bacillota
CTT
Lys
>WENV183580690
OOCN01000262
152512
Bacillota
CCT
Arg
>WENV183580553
OOCN01000096
152459
Bacillota
GTC
Asp
>WENV183581342
OOCN01021214
341763
Bacillota
CTC
Glu
>WENV183580975
OOCN01001319
429429
Bacillota
CCA
Trp
>WENV183581271
OOCN01010436
379268
Bacillota
TTC
Glu
>WENV183581185
OOCN01004734
313454
Bacillota
GAA
Phe
>WENV183581053
OOCN01001873
11034
Bacillota
GGA
Ser
>WENV183580944
OOCN01001130
11034
Bacillota
GGA
Ser
>WENV183580921
OOCN01000999
11034
Bacillota
GGA
Ser
>WENV183580702
OOCN01000266
239076
Bacillota
GAA
Phe
>WENV183580765
OOCN01000408
10943
Bacillota
GGA
Ser
>WENV183580763
OOCN01000408
10943
Bacillota
GGA
Ser
>WENV183580569
OOCN01000111
235697
Bacillota
GTT
Asn
>WENV183580787
OOCN01000465
342736
Bacillota
TTG
Gln
>WENV183580409
OOCN01000005
235079
Bacillota
GAA
Phe
>WENV183580520
OOCN01000069
296878
Bacillota
GTT
Asn
>WENV183580488
OOCN01000048
340265
Bacillota
GCC
Gly
>WENV183580444
OOCN01000024
152513
Bacillota
GAC
Val
>WENV183581222
OOCN01006364
338149
Bacillota
CTC
Glu
>WENV183580815
OOCN01000552
338149
Bacillota
CTC
Glu
>WENV183581093
OOCN01002416
245298
Bacillota
CGG
Pro
>WENV183580964
OOCN01001250
245298
Bacillota
CGG
Pro
>WENV183580934
OOCN01001053
245298
Bacillota
CGG
Pro
>WENV183581358
OOCN01027632
37269
Bacillota
TGA
Ser
>WENV183581198
OOCN01005314
37269
Bacillota
TGA
Ser
>WENV183581175
OOCN01004535
287000
Bacillota
GTT
Asn
>WENV183581077
OOCN01002086
37551
Bacillota
CGA
Ser
>WENV183581305
OOCN01015331
413152
Bacillota
TCC
Gly
>WENV183580949
OOCN01001169
162445
Bacillota
CAT
Met
>WENV183581343
OOCN01021495
201704
Bacillota
GAT
Ile
>WENV183580729
OOCN01000320
152492
Bacillota
GGG
Pro
>WENV183580422
OOCN01000006
100326
Bacillota
GTA
Tyr
>WENV183581050
OOCN01001825
144610
Bacillota
GTG
His
>WENV183580529
OOCN01000070
144610
Bacillota
GTG
His
>WENV183581007
OOCN01001458
240017
Bacillota
GCC
Gly
>WENV183580608
OOCN01000151
240017
Bacillota
GCC
Gly
>WENV183581092
OOCN01002416
411547
Bacillota
CTG
Gln
>WENV183580963
OOCN01001250
411547
Bacillota
CTG
Gln
>WENV183580933
OOCN01001053
411547
Bacillota
CTG
Gln
>WENV183580851
OOCN01000712
411547
Bacillota
CTG
Gln
>WENV183580658
OOCN01000199
411547
Bacillota
CTG
Gln
>WENV183580589
OOCN01000131
147684
Bacillota
ACG
Arg
>WENV183581057
OOCN01001893
4624
Bacillota
GCT
Ser
>WENV183580603
OOCN01000146
4624
Bacillota
GCT
Ser
>WENV183581266
OOCN01009957
4624
Bacillota
GCT
Ser
>WENV183581173
OOCN01004431
4624
Bacillota
GCT
Ser
>WENV183580995
OOCN01001389
412387
Bacillota
GCA
Cys
>WENV183581272
OOCN01010436
411584
Bacillota
TCC
Gly
>WENV183580522
OOCN01000069
248683
Bacillota
TTT
Lys
>WENV183581184
OOCN01004696
235095
Bacillota
GGT
Thr
>WENV183581026
OOCN01001653
235095
Bacillota
GGT
Thr
>WENV183580743
OOCN01000362
235095
Bacillota
GGT
Thr
>WENV183580521
OOCN01000069
344183
Bacillota
CTG
Gln
>WENV183580556
OOCN01000096
419945
Bacillota
GCA
Cys
>WENV183580524
OOCN01000069
304759
Bacillota
TAC
Val
>WENV183580486
OOCN01000048
304759
Bacillota
TAC
Val
>WENV183581084
OOCN01002218
411549
Bacillota
TTG
Gln
>WENV183580962
OOCN01001250
411549
Bacillota
TTG
Gln
>WENV183580931
OOCN01001038
411549
Bacillota
TTG
Gln
>WENV183580539
OOCN01000081
411549
Bacillota
TTG
Gln
>WENV183580695
OOCN01000262
152045
Bacillota
CAT
Met
>WENV183580523
OOCN01000069
243398
Bacillota
TTC
Glu
>WENV183580790
OOCN01000475
245386
Bacillota
CCA
Trp
>WENV183580683
OOCN01000246
37588
Bacillota
TGA
Ser
>WENV183581164
OOCN01003983
148188
Bacillota
CCG
Arg
>WENV183580778
OOCN01000446
148188
Bacillota
CCG
Arg
>WENV183580549
OOCN01000090
152046
Bacillota
TCT
Arg
>WENV183581193
OOCN01004943
80612
Bacillota
GTA
Tyr
>WENV183581196
OOCN01005119
235127
Bacillota
TTT
Lys
>WENV183580577
OOCN01000121
152051
Bacillota
ACG
Arg
>WENV183581292
OOCN01012243
243401
Bacillota
CGT
Thr
>WENV183581368
OOCN01030639
235638
Bacillota
GAA
Phe
>WENV183581155
OOCN01003624
235124
Bacillota
TGG
Pro
>WENV183581083
OOCN01002178
235124
Bacillota
TGG
Pro
>WENV183581079
OOCN01002152
235124
Bacillota
TGG
Pro
>WENV183580875
OOCN01000794
235124
Bacillota
TGG
Pro
>WENV183581382
OOCN01034017
237963
Bacillota
TTT
Lys
>WENV183581379
OOCN01034017
201667
Bacillota
TCT
Arg
>WENV183580985
OOCN01001362
338129
Bacillota
TGT
Thr
>WENV183580686
OOCN01000254
338129
Bacillota
TGT
Thr
>WENV183581380
OOCN01034017
279635
Bacillota
GTG
His
>WENV183581135
OOCN01003170
157838
Bacillota
GTC
Asp
>WENV183581234
OOCN01007313
144583
Bacillota
ACG
Arg
>WENV183580836
OOCN01000624
144583
Bacillota
ACG
Arg
>WENV183581225
OOCN01006520
247734
Bacillota
TGC
Ala
>WENV183581112
OOCN01002691
235171
Bacillota
CCA
Trp
>WENV183581024
OOCN01001653
235171
Bacillota
CCA
Trp
>WENV183581027
OOCN01001659
238974
Bacillota
GAA
Phe
>WENV183581223
OOCN01006364
144621
Bacillota
GTT
Asn
>WENV183580816
OOCN01000552
144621
Bacillota
GTT
Asn
>WENV183580622
OOCN01000163
144621
Bacillota
GTT
Asn
>WENV183580994
OOCN01001381
58712
Bacillota
CAG
Leu
>WENV183580983
OOCN01001360
58712
Bacillota
CAG
Leu
>WENV183580971
OOCN01001312
58712
Bacillota
CAG
Leu
>WENV183580834
OOCN01000617
58712
Bacillota
CAG
Leu
>WENV183581014
OOCN01001573
245296
Bacillota
CCC
Gly
>WENV183580895
OOCN01000853
245296
Bacillota
CCC
Gly
>WENV183580623
OOCN01000163
245296
Bacillota
CCC
Gly
>WENV183580484
OOCN01000048
239078
Bacillota
TTT
Lys
>WENV183581288
OOCN01011825
152497
Bacillota
GTC
Asp
>WENV183580694
OOCN01000262
281472
Bacillota
GGT
Thr
>WENV183580967
OOCN01001293
248965
Bacillota
GCC
Gly
>WENV183581356
OOCN01026586
299139
Bacillota
TGC
Ala
>WENV183581212
OOCN01005864
343021
Bacillota
CAT
Met
>WENV183581045
OOCN01001811
144594
Bacillota
CAC
Val
>WENV183581036
OOCN01001773
144594
Bacillota
CAC
Val
>WENV183580894
OOCN01000852
152018
Bacillota
CCT
Arg
>WENV183581195
OOCN01005119
272488
Bacillota
GAA
Phe
>WENV183580555
OOCN01000096
384950
Bacillota
GCC
Gly
>WENV183580809
OOCN01000546
338128
Bacillota
TTC
Glu
>WENV183580780
OOCN01000450
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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