This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
114 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183590697
OOCX01001958
158247
Bacillota
>WENV183590441
OOCX01000472
144612
Bacillota
TCT
Arg
>WENV183590563
OOCX01000921
144612
Bacillota
TCT
Arg
>WENV183590614
OOCX01001229
144612
Bacillota
TCT
Arg
>WENV183590818
OOCX01003578
144612
Bacillota
TCT
Arg
>WENV183590902
OOCX01005288
144612
Bacillota
TCT
Arg
>WENV183590612
OOCX01001220
235134
Bacillota
GAA
Phe
>WENV183590671
OOCX01001659
235098
Bacillota
GAC
Val
>WENV183590839
OOCX01003958
235098
Bacillota
GAC
Val
>WENV183590871
OOCX01004480
235098
Bacillota
GAC
Val
>WENV183590917
OOCX01005811
235098
Bacillota
GAC
Val
>WENV183591054
OOCX01013115
235098
Bacillota
GAC
Val
>WENV183590553
OOCX01000887
148239
Bacillota
TCT
Arg
>WENV183590384
OOCX01000319
44854
Bacillota
TGA
Ser
>WENV183590830
OOCX01003767
44854
Bacillota
TGA
Ser
>WENV183590892
OOCX01004881
44854
Bacillota
TGA
Ser
>WENV183590973
OOCX01008376
59312
Bacillota
CAG
Leu
>WENV183590678
OOCX01001701
59312
Bacillota
CAG
Leu
>WENV183590113
OOCX01000026
59312
Bacillota
CAG
Leu
>WENV183590686
OOCX01001787
338147
Bacillota
CTC
Glu
>WENV183590566
OOCX01000929
338147
Bacillota
CTC
Glu
>WENV183590295
OOCX01000171
338147
Bacillota
CTC
Glu
>WENV183590294
OOCX01000171
338147
Bacillota
CTC
Glu
>WENV183590293
OOCX01000171
338147
Bacillota
CTC
Glu
>WENV183591182
OOCX01028029
235150
Bacillota
TGC
Ala
>WENV183591244
OOCX01049835
235294
Bacillota
TGC
Ala
>WENV183590494
OOCX01000653
338208
Bacillota
>WENV183590212
OOCX01000098
293599
Bacillota
CTT
Lys
>WENV183590493
OOCX01000653
116350
Bacillota
TAG
Leu
>WENV183590595
OOCX01001135
429429
Bacillota
CCA
Trp
>WENV183591097
OOCX01017533
379268
Bacillota
TTC
Glu
>WENV183590738
OOCX01002391
41154
Bacillota
TAA
Leu
>WENV183590774
OOCX01002951
44859
Bacillota
AAG
Leu
>WENV183590586
OOCX01001050
11034
Bacillota
GGA
Ser
>WENV183590496
OOCX01000653
235290
Bacillota
TTG
Gln
>WENV183590483
OOCX01000635
295714
Bacillota
GCC
Gly
>WENV183591152
OOCX01022259
16266
Bacillota
GCT
Ser
>WENV183590250
OOCX01000125
173314
Bacillota
GAT
Ile
>WENV183591122
OOCX01019465
149041
Bacillota
GTC
Asp
>WENV183591069
OOCX01014185
338149
Bacillota
CTC
Glu
>WENV183590909
OOCX01005529
338149
Bacillota
CTC
Glu
>WENV183590919
OOCX01005848
245298
Bacillota
CGG
Pro
>WENV183590717
OOCX01002072
245298
Bacillota
CGG
Pro
>WENV183590599
OOCX01001162
245298
Bacillota
CGG
Pro
>WENV183590491
OOCX01000653
380750
Bacillota
TGT
Thr
>WENV183591204
OOCX01035280
413152
Bacillota
TCC
Gly
>WENV183591206
OOCX01035280
152149
Bacillota
GTG
His
>WENV183590834
OOCX01003842
152492
Bacillota
GGG
Pro
>WENV183591165
OOCX01024372
153911
Bacillota
GAT
Ile
>WENV183590434
OOCX01000451
100326
Bacillota
GTA
Tyr
>WENV183590554
OOCX01000887
144610
Bacillota
GTG
His
>WENV183590613
OOCX01001220
240017
Bacillota
GCC
Gly
>WENV183590183
OOCX01000076
240017
Bacillota
GCC
Gly
>WENV183590598
OOCX01001162
411547
Bacillota
CTG
Gln
>WENV183590547
OOCX01000855
411547
Bacillota
CTG
Gln
>WENV183590962
OOCX01007390
411547
Bacillota
CTG
Gln
>WENV183590918
OOCX01005848
411547
Bacillota
CTG
Gln
>WENV183590752
OOCX01002688
411547
Bacillota
CTG
Gln
>WENV183590716
OOCX01002072
411547
Bacillota
CTG
Gln
>WENV183590893
OOCX01004881
4624
Bacillota
GCT
Ser
>WENV183590831
OOCX01003767
4624
Bacillota
GCT
Ser
>WENV183590385
OOCX01000319
4624
Bacillota
GCT
Ser
>WENV183590610
OOCX01001220
263765
Bacillota
TAC
Val
>WENV183590182
OOCX01000076
263765
Bacillota
TAC
Val
>WENV183590745
OOCX01002517
412387
Bacillota
GCA
Cys
>WENV183591098
OOCX01017533
411584
Bacillota
TCC
Gly
>WENV183590864
OOCX01004246
235095
Bacillota
GGT
Thr
>WENV183591120
OOCX01019465
239832
Bacillota
TGT
Thr
>WENV183590305
OOCX01000186
419639
Bacillota
GCA
Cys
>WENV183590490
OOCX01000653
235289
Bacillota
GTT
Asn
>WENV183590698
OOCX01001974
411549
Bacillota
TTG
Gln
>WENV183590683
OOCX01001741
411549
Bacillota
TTG
Gln
>WENV183590532
OOCX01000783
411549
Bacillota
TTG
Gln
>WENV183590418
OOCX01000404
411549
Bacillota
TTG
Gln
>WENV183590696
OOCX01001957
235142
Bacillota
CTT
Lys
>WENV183590512
OOCX01000717
235142
Bacillota
CTT
Lys
>WENV183590957
OOCX01007189
148188
Bacillota
CCG
Arg
>WENV183590837
OOCX01003880
148188
Bacillota
CCG
Arg
>WENV183590457
OOCX01000525
80612
Bacillota
GTA
Tyr
>WENV183590487
OOCX01000646
235127
Bacillota
TTT
Lys
>WENV183590058
OOCX01000001
298620
Bacillota
CAT
Met
>WENV183590926
OOCX01005920
235124
Bacillota
TGG
Pro
>WENV183590911
OOCX01005559
235124
Bacillota
TGG
Pro
>WENV183590653
OOCX01001530
338129
Bacillota
TGT
Thr
>WENV183590589
OOCX01001080
338129
Bacillota
TGT
Thr
>WENV183590407
OOCX01000383
338129
Bacillota
TGT
Thr
>WENV183590862
OOCX01004227
157838
Bacillota
GTC
Asp
>WENV183590412
OOCX01000388
144583
Bacillota
ACG
Arg
>WENV183590968
OOCX01007921
238974
Bacillota
GAA
Phe
>WENV183591070
OOCX01014185
144621
Bacillota
GTT
Asn
>WENV183590910
OOCX01005529
144621
Bacillota
GTT
Asn
>WENV183590803
OOCX01003335
144621
Bacillota
GTT
Asn
>WENV183590654
OOCX01001535
144621
Bacillota
GTT
Asn
>WENV183590644
OOCX01001420
144621
Bacillota
GTT
Asn
>WENV183590218
OOCX01000100
243098
Bacillota
GGT
Thr
>WENV183590459
OOCX01000538
58712
Bacillota
CAG
Leu
>WENV183590456
OOCX01000525
58712
Bacillota
CAG
Leu
>WENV183590495
OOCX01000653
144762
Bacillota
TCT
Arg
>WENV183590690
OOCX01001842
245296
Bacillota
CCC
Gly
>WENV183590452
OOCX01000507
245296
Bacillota
CCC
Gly
>WENV183590646
OOCX01001454
272992
Bacillota
CTT
Lys
>WENV183590237
OOCX01000111
344240
Bacillota
GCC
Gly
>WENV183590262
OOCX01000132
196632
Bacillota
GTC
Asp
>WENV183590469
OOCX01000559
144594
Bacillota
CAC
Val
>WENV183590996
OOCX01009603
95563
Bacillota
GTA
Tyr
>WENV183590281
OOCX01000146
338127
Bacillota
TTG
Gln
>WENV183590723
OOCX01002115
414486
Bacillota
CCC
Gly
>WENV183590486
OOCX01000646
272488
Bacillota
GAA
Phe
>WENV183590861
OOCX01004227
263523
Bacillota
TAC
Val
>WENV183590785
OOCX01003106
338131
Bacillota
GCC
Gly
>WENV183590882
OOCX01004697
338128
Bacillota
TTC
Glu
>WENV183590727
OOCX01002186
338128
Bacillota
TTC
Glu
>WENV183590427
OOCX01000435
338128
Bacillota
TTC
Glu
>WENV183590263
OOCX01000132
245344
Bacillota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
BACK