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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
20 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180116941
OARB01000212
223655
Spirochaetota
TAG
Leu
>WENV180116940
OARB01000155
562568
Spirochaetota
TGT
Thr
>WENV180116971
OARB01001254
280977
Spirochaetota
GAT
Ile
>WENV180116978
OARB01002172
462527
Spirochaetota
TTT
Lys
>WENV180116973
OARB01001288
462554
Spirochaetota
CCA
Trp
>WENV180116960
OARB01000610
280956
Spirochaetota
TCT
Arg
>WENV180116954
OARB01000368
271226
Spirochaetota
CAT
Met
>WENV180116968
OARB01000945
280997
Spirochaetota
CAT
Met
>WENV180116959
OARB01000610
280986
Spirochaetota
TGG
Pro
>WENV180116957
OARB01000527
462537
Spirochaetota
GAA
Phe
>WENV180116972
OARB01001254
280949
Spirochaetota
TGC
Ala
>WENV180116975
OARB01001723
181909
Spirochaetota
GAG
Leu
>WENV180116956
OARB01000444
462503
Spirochaetota
CCT
Arg
>WENV180116970
OARB01001108
462506
Spirochaetota
GTT
Asn
>WENV180116943
OARB01000237
462515
Spirochaetota
GCC
Gly
>WENV180116966
OARB01000848
280958
Spirochaetota
GCG
Arg
>WENV180116955
OARB01000444
154943
Spirochaetota
TGA
Ser
>WENV180116961
OARB01000610
280974
Spirochaetota
GTG
His
>WENV180116976
OARB01001760
490688
Spirochaetota
TAC
Val
>WENV180116969
OARB01001025
659388
Spirochaetota
TCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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