This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
90 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170102062
CEAX01000340
235098
Bacillota
GAC
Val
>WENV170102070
CEAX01000765
144583
Bacillota
ACG
Arg
>WENV170102091
CEAX01001763
163943
Bacillota
GTC
Asp
>WENV170102109
CEAX01002445
235124
Bacillota
TGG
Pro
>WENV170102125
CEAX01003033
44859
Bacillota
AAG
Leu
>WENV170102126
CEAX01003033
44859
Bacillota
AAG
Leu
>WENV170102127
CEAX01003033
59312
Bacillota
CAG
Leu
>WENV170102151
CEAX01003911
235095
Bacillota
GGT
Thr
>WENV170102158
CEAX01003948
100326
Bacillota
GTA
Tyr
>WENV170102197
CEAX01005797
235113
Bacillota
GAA
Phe
>WENV170102218
CEAX01006681
169968
Bacillota
CAT
Met
>WENV170102219
CEAX01006681
272488
Bacillota
GAA
Phe
>WENV170102248
CEAX01007979
144621
Bacillota
GTT
Asn
>WENV170102261
CEAX01008463
235095
Bacillota
GGT
Thr
>WENV170102264
CEAX01008508
148239
Bacillota
TCT
Arg
>WENV170102265
CEAX01008508
156937
Bacillota
GTG
His
>WENV170102278
CEAX01009184
235098
Bacillota
GAC
Val
>WENV170102304
CEAX01010084
411549
Bacillota
TTG
Gln
>WENV170102306
CEAX01010239
80612
Bacillota
GTA
Tyr
>WENV170102307
CEAX01010378
144612
Bacillota
TCT
Arg
>WENV170102329
CEAX01010959
235124
Bacillota
TGG
Pro
>WENV170102331
CEAX01011128
411547
Bacillota
CTG
Gln
>WENV170102336
CEAX01011308
144610
Bacillota
GTG
His
>WENV170102348
CEAX01011324
163943
Bacillota
GTC
Asp
>WENV170102446
CEAX01015245
37071
Bacillota
TGA
Ser
>WENV170102459
CEAX01015887
155958
Bacillota
GAT
Ile
>WENV170102489
CEAX01016660
238974
Bacillota
GAA
Phe
>WENV170102511
CEAX01017172
429429
Bacillota
CCA
Trp
>WENV170102530
CEAX01018023
196632
Bacillota
GTC
Asp
>WENV170102531
CEAX01018023
344240
Bacillota
GCC
Gly
>WENV170102544
CEAX01018430
263765
Bacillota
TAC
Val
>WENV170102569
CEAX01018582
235124
Bacillota
TGG
Pro
>WENV170102582
CEAX01019132
235098
Bacillota
GAC
Val
>WENV170102597
CEAX01019803
144594
Bacillota
CAC
Val
>WENV170102600
CEAX01019948
100326
Bacillota
GTA
Tyr
>WENV170102651
CEAX01021629
144621
Bacillota
GTT
Asn
>WENV170102689
CEAX01022536
235095
Bacillota
GGT
Thr
>WENV170102698
CEAX01022930
235150
Bacillota
TGC
Ala
>WENV170102722
CEAX01023303
95563
Bacillota
GTA
Tyr
>WENV170102746
CEAX01023781
338147
Bacillota
CTC
Glu
>WENV170102765
CEAX01024391
235095
Bacillota
GGT
Thr
>WENV170102793
CEAX01025951
235078
Bacillota
TAC
Val
>WENV170102796
CEAX01025951
271471
Bacillota
GCC
Gly
>WENV170102821
CEAX01026432
273862
Bacillota
TGC
Ala
>WENV170102831
CEAX01026799
272992
Bacillota
CTT
Lys
>WENV170102832
CEAX01026806
238910
Bacillota
CTT
Lys
>WENV170102841
CEAX01026873
414486
Bacillota
CCC
Gly
>WENV170102845
CEAX01027042
11034
Bacillota
GGA
Ser
>WENV170102861
CEAX01027374
338129
Bacillota
TGT
Thr
>WENV170102865
CEAX01027590
37071
Bacillota
TGA
Ser
>WENV170102887
CEAX01028522
338147
Bacillota
CTC
Glu
>WENV170102895
CEAX01028715
235098
Bacillota
GAC
Val
>WENV170102900
CEAX01028975
338147
Bacillota
CTC
Glu
>WENV170102903
CEAX01028995
238974
Bacillota
GAA
Phe
>WENV170102930
CEAX01029872
235078
Bacillota
TAC
Val
>WENV170102932
CEAX01029872
271471
Bacillota
GCC
Gly
>WENV170102964
CEAX01030368
144652
Bacillota
GTC
Asp
>WENV170102967
CEAX01030368
95563
Bacillota
GTA
Tyr
>WENV170102969
CEAX01030368
235113
Bacillota
GAA
Phe
>WENV170102970
CEAX01030368
235114
Bacillota
TTT
Lys
>WENV170102971
CEAX01030374
144594
Bacillota
CAC
Val
>WENV170102986
CEAX01031039
338128
Bacillota
TTC
Glu
>WENV170102987
CEAX01031062
235142
Bacillota
CTT
Lys
>WENV170102998
CEAX01031704
235142
Bacillota
CTT
Lys
>WENV170103050
CEAX01034074
144621
Bacillota
GTT
Asn
>WENV170103075
CEAX01035072
295714
Bacillota
GCC
Gly
>WENV170103076
CEAX01035072
295714
Bacillota
GCC
Gly
>WENV170103088
CEAX01035516
338128
Bacillota
TTC
Glu
>WENV170103127
CEAX01036632
245296
Bacillota
CCC
Gly
>WENV170103133
CEAX01036967
144610
Bacillota
GTG
His
>WENV170103135
CEAX01036967
235114
Bacillota
TTT
Lys
>WENV170103190
CEAX01038872
338128
Bacillota
TTC
Glu
>WENV170103195
CEAX01038898
20749
Bacillota
GCT
Ser
>WENV170103206
CEAX01039336
274189
Bacillota
TGT
Thr
>WENV170103231
CEAX01040401
411547
Bacillota
CTG
Gln
>WENV170103275
CEAX01042200
235142
Bacillota
CTT
Lys
>WENV170103302
CEAX01043386
235124
Bacillota
TGG
Pro
>WENV170103308
CEAX01043667
144594
Bacillota
CAC
Val
>WENV170103413
CEAX01047515
37269
Bacillota
TGA
Ser
>WENV170103415
CEAX01047643
411547
Bacillota
CTG
Gln
>WENV170103420
CEAX01047878
238910
Bacillota
CTT
Lys
>WENV170103426
CEAX01047936
338147
Bacillota
CTC
Glu
>WENV170103436
CEAX01048198
338128
Bacillota
TTC
Glu
>WENV170103450
CEAX01048398
37269
Bacillota
TGA
Ser
>WENV170103458
CEAX01048490
272488
Bacillota
GAA
Phe
>WENV170103471
CEAX01049051
272488
Bacillota
GAA
Phe
>WENV170103480
CEAX01049522
287000
Bacillota
GTT
Asn
>WENV170103490
CEAX01049796
144621
Bacillota
GTT
Asn
>WENV170103551
CEAX01051842
347827
Bacillota
TTC
Glu
>WENV170103594
CEAX01052880
243098
Bacillota
GGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
BACK