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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
52 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170136728
CENV01066214
252328
Alphaproteobacteria
TTT
Lys
>WENV170136710
CENV01064778
365250
Alphaproteobacteria
GCC
Gly
>WENV170136708
CENV01064143
148200
Alphaproteobacteria
TGG
Pro
>WENV170136820
CENV01079681
237493
Alphaproteobacteria
CCA
Trp
>WENV170136838
CENV01083124
339737
Alphaproteobacteria
GAC
Val
>WENV170136970
CENV01125745
113700
Alphaproteobacteria
>WENV170136192
CENV01010630
159305
Alphaproteobacteria
GTC
Asp
>WENV170136876
CENV01087687
191197
Alphaproteobacteria
CCG
Arg
>WENV170136778
CENV01073937
162262
Alphaproteobacteria
GAC
Val
>WENV170136659
CENV01058391
146875
Alphaproteobacteria
GTG
His
>WENV170136294
CENV01020165
339723
Alphaproteobacteria
>WENV170136859
CENV01086269
147577
Alphaproteobacteria
CCG
Arg
>WENV170136695
CENV01062340
165860
Alphaproteobacteria
TGG
Pro
>WENV170136105
CENV01001812
199865
Alphaproteobacteria
CAT
Met
>WENV170136960
CENV01123064
254188
Alphaproteobacteria
CCA
Trp
>WENV170136248
CENV01016274
95928
Alphaproteobacteria
TAG
Leu
>WENV170136992
CENV01130553
236134
Alphaproteobacteria
TAC
Val
>WENV170136150
CENV01006087
108283
Alphaproteobacteria
CAA
Leu
>WENV170136548
CENV01047485
339290
Alphaproteobacteria
GGT
Thr
>WENV170136539
CENV01046585
339290
Alphaproteobacteria
GGT
Thr
>WENV170136370
CENV01027427
166353
Alphaproteobacteria
ACG
Arg
>WENV170136369
CENV01027427
166353
Alphaproteobacteria
ACG
Arg
>WENV170136807
CENV01078639
383873
Alphaproteobacteria
>WENV170136315
CENV01022309
160251
Alphaproteobacteria
CAT
Met
>WENV170136090
CENV01000529
237740
Alphaproteobacteria
TTT
Lys
>WENV170136551
CENV01047713
105992
Alphaproteobacteria
TAG
Leu
>WENV170136147
CENV01005920
74116
Alphaproteobacteria
CAG
Leu
>WENV170136761
CENV01072226
252375
Alphaproteobacteria
GTT
Asn
>WENV170136341
CENV01024590
60367
Alphaproteobacteria
CAG
Leu
>WENV170136174
CENV01008971
148158
Alphaproteobacteria
ACG
Arg
>WENV170136409
CENV01030784
258175
Alphaproteobacteria
CGC
Ala
>WENV170136202
CENV01011342
258175
Alphaproteobacteria
CGC
Ala
>WENV170136534
CENV01045875
173246
Alphaproteobacteria
CCT
Arg
>WENV170136330
CENV01023201
167926
Alphaproteobacteria
CAT
Met
>WENV170136342
CENV01024592
364533
Alphaproteobacteria
GCC
Gly
>WENV170136344
CENV01024762
243806
Alphaproteobacteria
CCA
Trp
>WENV170136997
CENV01131497
80837
Alphaproteobacteria
TAA
Leu
>WENV170136854
CENV01085268
338622
Alphaproteobacteria
GTT
Asn
>WENV170137006
CENV01132862
25720
Alphaproteobacteria
CGA
Ser
>WENV170136879
CENV01088103
303842
Alphaproteobacteria
TAC
Val
>WENV170136568
CENV01049309
369678
Alphaproteobacteria
GGT
Thr
>WENV170136363
CENV01026698
369678
Alphaproteobacteria
GGT
Thr
>WENV170136426
CENV01032275
338287
Alphaproteobacteria
GGT
Thr
>WENV170136306
CENV01020993
21074
Alphaproteobacteria
GGA
Ser
>WENV170136106
CENV01001812
180581
Alphaproteobacteria
TGG
Pro
>WENV170136517
CENV01044107
377327
Alphaproteobacteria
GCC
Gly
>WENV170136669
CENV01059020
243633
Alphaproteobacteria
CGT
Thr
>WENV170136464
CENV01037517
243633
Alphaproteobacteria
CGT
Thr
>WENV170136088
CENV01000396
10904
Alphaproteobacteria
GCT
Ser
>WENV170136273
CENV01018934
27709
Alphaproteobacteria
GCT
Ser
>WENV170136278
CENV01019274
147286
Alphaproteobacteria
CGG
Pro
>WENV170136364
CENV01026698
426627
Alphaproteobacteria
TCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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