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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
32 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170561615
CZCA01016671
378157
Bacillota
TTC
Glu
>WENV170561714
CZCA01022742
152155
Bacillota
ACG
Arg
>WENV170560798
CZCA01000592
194265
Bacillota
CAT
Met
>WENV170561529
CZCA01012806
238816
Bacillota
GAA
Phe
>WENV170560765
CZCA01000440
353391
Bacillota
GCC
Gly
>WENV170560795
CZCA01000584
353391
Bacillota
GCC
Gly
>WENV170560979
CZCA01001724
353391
Bacillota
GCC
Gly
>WENV170561043
CZCA01002500
353391
Bacillota
GCC
Gly
>WENV170561153
CZCA01003387
353391
Bacillota
GCC
Gly
>WENV170561255
CZCA01005317
353391
Bacillota
GCC
Gly
>WENV170561298
CZCA01005933
148104
Bacillota
CAT
Met
>WENV170561433
CZCA01009228
148104
Bacillota
CAT
Met
>WENV170561765
CZCA01027176
243227
Bacillota
GTT
Asn
>WENV170560706
CZCA01000104
341996
Bacillota
CCC
Gly
>WENV170561719
CZCA01023094
274189
Bacillota
TGT
Thr
>WENV170561209
CZCA01004443
173314
Bacillota
GAT
Ile
>WENV170561530
CZCA01012806
338531
Bacillota
GCC
Gly
>WENV170561412
CZCA01008364
341939
Bacillota
CCC
Gly
>WENV170560963
CZCA01001533
341939
Bacillota
CCC
Gly
>WENV170560873
CZCA01000852
236184
Bacillota
GGT
Thr
>WENV170561384
CZCA01007651
348433
Bacillota
TTC
Glu
>WENV170561349
CZCA01006716
263765
Bacillota
TAC
Val
>WENV170560926
CZCA01001240
263765
Bacillota
TAC
Val
>WENV170561761
CZCA01027134
341997
Bacillota
GTT
Asn
>WENV170561001
CZCA01001863
259290
Bacillota
CAT
Met
>WENV170560811
CZCA01000628
241736
Bacillota
TTT
Lys
>WENV170560778
CZCA01000489
247734
Bacillota
TGC
Ala
>WENV170561085
CZCA01002695
242686
Bacillota
TGC
Ala
>WENV170561382
CZCA01007651
37421
Bacillota
TAA
Leu
>WENV170561047
CZCA01002509
3525
Bacillota
GCT
Ser
>WENV170561234
CZCA01004874
292012
Bacillota
TGC
Ala
>WENV170561302
CZCA01005951
294589
Bacillota
TAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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