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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
39 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170561575
CZCA01014260
451778
Bacillota
TCC
Gly
>WENV170561385
CZCA01007651
268378
Bacillota
TAC
Val
>WENV170561093
CZCA01002803
370288
Bacillota
TTC
Glu
>WENV170561578
CZCA01014260
290948
Bacillota
TTT
Lys
>WENV170561384
CZCA01007651
375946
Bacillota
TTC
Glu
>WENV170561047
CZCA01002509
3966
Bacillota
GCT
Ser
>WENV170561394
CZCA01007998
95109
Bacillota
GTA
Tyr
>WENV170561485
CZCA01011166
95109
Bacillota
GTA
Tyr
>WENV170561363
CZCA01007228
42636
Bacillota
CAA
Leu
>WENV170561527
CZCA01012806
279984
Bacillota
TAC
Val
>WENV170561714
CZCA01022742
171343
Bacillota
ACG
Arg
>WENV170561449
CZCA01009702
371927
Bacillota
GCC
Gly
>WENV170561574
CZCA01014260
371927
Bacillota
GCC
Gly
>WENV170561624
CZCA01016847
274128
Bacillota
TTT
Lys
>WENV170561013
CZCA01001993
371319
Bacillota
TTG
Gln
>WENV170561343
CZCA01006682
181889
Bacillota
>WENV170561615
CZCA01016671
376366
Bacillota
TTC
Glu
>WENV170561113
CZCA01003064
270859
Bacillota
CCA
Trp
>WENV170561660
CZCA01019380
270859
Bacillota
CCA
Trp
>WENV170560963
CZCA01001533
377778
Bacillota
CCC
Gly
>WENV170561412
CZCA01008364
377778
Bacillota
CCC
Gly
>WENV170561529
CZCA01012806
259262
Bacillota
GAA
Phe
>WENV170561484
CZCA01011166
369980
Bacillota
>WENV170561761
CZCA01027134
370684
Bacillota
GTT
Asn
>WENV170561517
CZCA01012653
169637
Bacillota
GAT
Ile
>WENV170561564
CZCA01013932
175843
Bacillota
GTC
Asp
>WENV170561655
CZCA01019302
400575
Bacillota
GTT
Asn
>WENV170560929
CZCA01001240
258126
Bacillota
GCC
Gly
>WENV170561014
CZCA01001993
258126
Bacillota
GCC
Gly
>WENV170561151
CZCA01003387
259258
Bacillota
CTT
Lys
>WENV170561395
CZCA01007998
259258
Bacillota
CTT
Lys
>WENV170561581
CZCA01014311
259685
Bacillota
GGT
Thr
>WENV170561718
CZCA01022935
380730
Bacillota
>WENV170561571
CZCA01014260
199470
Bacillota
GTC
Asp
>WENV170561569
CZCA01014260
377818
Bacillota
GTT
Asn
>WENV170561382
CZCA01007651
44455
Bacillota
TAA
Leu
>WENV170560873
CZCA01000852
303156
Bacillota
GGT
Thr
>WENV170561164
CZCA01003549
303156
Bacillota
GGT
Thr
>WENV170561572
CZCA01014260
386816
Bacillota
TGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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