This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
135 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180009709
FLSC01054565
448372
Bacteroidota
GCA
Cys
>WENV180009619
FLSC01028028
161400
Bacteroidota
>WENV180009420
FLSC01002775
468515
Bacteroidota
>WENV180009364
FLSC01001955
258203
Bacteroidota
CCA
Trp
>WENV180009384
FLSC01002307
258203
Bacteroidota
CCA
Trp
>WENV180009421
FLSC01002804
159594
Bacteroidota
CAT
Met
>WENV180010370
FLSC01482891
159594
Bacteroidota
CAT
Met
>WENV180009833
FLSC01115744
452016
Bacteroidota
GCA
Cys
>WENV180010286
FLSC01455377
202994
Bacteroidota
TGG
Pro
>WENV180009351
FLSC01001699
163480
Bacteroidota
TGC
Ala
>WENV180009547
FLSC01011155
369487
Bacteroidota
>WENV180010025
FLSC01237479
369487
Bacteroidota
>WENV180009266
FLSC01000262
27710
Bacteroidota
GCT
Ser
>WENV180009399
FLSC01002578
27710
Bacteroidota
GCT
Ser
>WENV180009959
FLSC01196924
369581
Bacteroidota
>WENV180009418
FLSC01002689
286278
Bacteroidota
TTT
Lys
>WENV180009571
FLSC01015885
286278
Bacteroidota
TTT
Lys
>WENV180009646
FLSC01035443
286278
Bacteroidota
TTT
Lys
>WENV180009857
FLSC01129219
286278
Bacteroidota
TTT
Lys
>WENV180010371
FLSC01482900
286278
Bacteroidota
TTT
Lys
>WENV180009422
FLSC01002808
159421
Bacteroidota
GTG
His
>WENV180010207
FLSC01406160
451533
Bacteroidota
>WENV180010428
FLSC01483072
451533
Bacteroidota
>WENV180009258
FLSC01000147
453595
Bacteroidota
CTG
Gln
>WENV180009400
FLSC01002578
414038
Bacteroidota
CTC
Glu
>WENV180009401
FLSC01002578
414038
Bacteroidota
CTC
Glu
>WENV180010078
FLSC01281056
369584
Bacteroidota
GTG
His
>WENV180009506
FLSC01007226
159422
Bacteroidota
TGG
Pro
>WENV180009982
FLSC01210783
258197
Bacteroidota
CCA
Trp
>WENV180009853
FLSC01127088
144955
Bacteroidota
GGG
Pro
>WENV180009317
FLSC01000848
376547
Bacteroidota
CCT
Arg
>WENV180009447
FLSC01002897
376547
Bacteroidota
CCT
Arg
>WENV180009596
FLSC01022115
376547
Bacteroidota
CCT
Arg
>WENV180010166
FLSC01362812
469075
Bacteroidota
>WENV180009612
FLSC01025914
91080
Bacteroidota
GTA
Tyr
>WENV180009307
FLSC01000640
277633
Bacteroidota
CTT
Lys
>WENV180009792
FLSC01087119
277633
Bacteroidota
CTT
Lys
>WENV180009659
FLSC01040694
159589
Bacteroidota
>WENV180009680
FLSC01045288
159589
Bacteroidota
>WENV180010164
FLSC01362356
88755
Bacteroidota
CAG
Leu
>WENV180009259
FLSC01000179
159413
Bacteroidota
>WENV180009517
FLSC01008368
159413
Bacteroidota
>WENV180009539
FLSC01010092
159413
Bacteroidota
>WENV180009597
FLSC01022771
159413
Bacteroidota
>WENV180009725
FLSC01059627
159413
Bacteroidota
>WENV180010114
FLSC01310986
159413
Bacteroidota
>WENV180010401
FLSC01483005
159413
Bacteroidota
>WENV180009758
FLSC01075009
159420
Bacteroidota
CAT
Met
>WENV180009884
FLSC01143709
325097
Bacteroidota
CGT
Thr
>WENV180009250
FLSC01000031
258398
Bacteroidota
>WENV180009469
FLSC01003708
258398
Bacteroidota
>WENV180009755
FLSC01072693
258398
Bacteroidota
>WENV180009781
FLSC01083163
258398
Bacteroidota
>WENV180009296
FLSC01000491
170116
Bacteroidota
TGG
Pro
>WENV180010119
FLSC01311419
170116
Bacteroidota
TGG
Pro
>WENV180009540
FLSC01010126
472284
Bacteroidota
TTG
Gln
>WENV180009293
FLSC01000461
293423
Bacteroidota
TTT
Lys
>WENV180010398
FLSC01482993
19144
Bacteroidota
GGA
Ser
>WENV180010311
FLSC01472303
138942
Bacteroidota
GGG
Pro
>WENV180010378
FLSC01482912
138942
Bacteroidota
GGG
Pro
>WENV180009306
FLSC01000613
116055
Bacteroidota
CAA
Leu
>WENV180009520
FLSC01008729
116055
Bacteroidota
CAA
Leu
>WENV180010121
FLSC01312667
116055
Bacteroidota
CAA
Leu
>WENV180010403
FLSC01483011
116055
Bacteroidota
CAA
Leu
>WENV180009948
FLSC01192378
193554
Bacteroidota
GTT
Asn
>WENV180009740
FLSC01064881
138926
Bacteroidota
>WENV180009741
FLSC01064881
138926
Bacteroidota
>WENV180010240
FLSC01433007
138926
Bacteroidota
>WENV180009332
FLSC01001170
138941
Bacteroidota
TAC
Val
>WENV180009985
FLSC01212396
131234
Bacteroidota
CAA
Leu
>WENV180009555
FLSC01013102
159953
Bacteroidota
CAT
Met
>WENV180009456
FLSC01003130
49817
Bacteroidota
TGA
Ser
>WENV180010032
FLSC01243143
225567
Bacteroidota
GGC
Ala
>WENV180009648
FLSC01036663
369586
Bacteroidota
CCT
Arg
>WENV180009378
FLSC01002247
369589
Bacteroidota
TTC
Glu
>WENV180009910
FLSC01155880
369589
Bacteroidota
TTC
Glu
>WENV180009940
FLSC01184031
451437
Bacteroidota
TTG
Gln
>WENV180009318
FLSC01000848
448321
Bacteroidota
TTG
Gln
>WENV180009347
FLSC01001647
448321
Bacteroidota
TTG
Gln
>WENV180009836
FLSC01117058
448321
Bacteroidota
TTG
Gln
>WENV180009532
FLSC01009742
191331
Bacteroidota
GTC
Asp
>WENV180009606
FLSC01025090
183527
Bacteroidota
GTG
His
>WENV180010219
FLSC01418252
183527
Bacteroidota
GTG
His
>WENV180010406
FLSC01483021
183527
Bacteroidota
GTG
His
>WENV180009471
FLSC01003829
258198
Bacteroidota
GGG
Pro
>WENV180010073
FLSC01275102
105235
Bacteroidota
TAG
Leu
>WENV180009381
FLSC01002307
105253
Bacteroidota
GTA
Tyr
>WENV180009382
FLSC01002307
105253
Bacteroidota
GTA
Tyr
>WENV180009408
FLSC01002589
105253
Bacteroidota
GTA
Tyr
>WENV180009489
FLSC01005406
105253
Bacteroidota
GTA
Tyr
>WENV180009637
FLSC01032905
105253
Bacteroidota
GTA
Tyr
>WENV180010241
FLSC01433007
105253
Bacteroidota
GTA
Tyr
>WENV180009267
FLSC01000262
369490
Bacteroidota
CTC
Glu
>WENV180009268
FLSC01000262
369490
Bacteroidota
CTC
Glu
>WENV180009269
FLSC01000262
369490
Bacteroidota
CTC
Glu
>WENV180009541
FLSC01010250
369490
Bacteroidota
CTC
Glu
>WENV180009530
FLSC01009322
369590
Bacteroidota
CCT
Arg
>WENV180010255
FLSC01440892
451301
Bacteroidota
CCA
Trp
>WENV180009262
FLSC01000241
41238
Bacteroidota
TAA
Leu
>WENV180009316
FLSC01000848
41238
Bacteroidota
TAA
Leu
>WENV180010062
FLSC01263169
41238
Bacteroidota
TAA
Leu
>WENV180010155
FLSC01354257
41238
Bacteroidota
TAA
Leu
>WENV180009341
FLSC01001408
64920
Bacteroidota
GAG
Leu
>WENV180009410
FLSC01002589
294312
Bacteroidota
CCA
Trp
>WENV180009453
FLSC01003062
159412
Bacteroidota
GTC
Asp
>WENV180009454
FLSC01003062
159412
Bacteroidota
GTC
Asp
>WENV180009491
FLSC01005428
159412
Bacteroidota
GTC
Asp
>WENV180010324
FLSC01479821
159412
Bacteroidota
GTC
Asp
>WENV180010325
FLSC01479821
159412
Bacteroidota
GTC
Asp
>WENV180009383
FLSC01002307
369492
Bacteroidota
GGT
Thr
>WENV180009409
FLSC01002589
369492
Bacteroidota
GGT
Thr
>WENV180010391
FLSC01482941
310118
Bacteroidota
CCA
Trp
>WENV180009991
FLSC01214179
258392
Bacteroidota
CCA
Trp
>WENV180009749
FLSC01069099
324834
Bacteroidota
CCC
Gly
>WENV180009289
FLSC01000461
313757
Bacteroidota
CTT
Lys
>WENV180009290
FLSC01000461
313757
Bacteroidota
CTT
Lys
>WENV180009291
FLSC01000461
313757
Bacteroidota
CTT
Lys
>WENV180009275
FLSC01000391
107420
Bacteroidota
TAG
Leu
>WENV180010289
FLSC01455377
64887
Bacteroidota
GAG
Leu
>WENV180009295
FLSC01000491
455740
Bacteroidota
CCC
Gly
>WENV180010245
FLSC01437408
455740
Bacteroidota
CCC
Gly
>WENV180009352
FLSC01001748
140599
Bacteroidota
GGG
Pro
>WENV180010233
FLSC01427104
140599
Bacteroidota
GGG
Pro
>WENV180010405
FLSC01483019
140599
Bacteroidota
GGG
Pro
>WENV180010189
FLSC01386317
30978
Bacteroidota
GCT
Ser
>WENV180010399
FLSC01482994
30978
Bacteroidota
GCT
Ser
>WENV180009294
FLSC01000491
275590
Bacteroidota
CGT
Thr
>WENV180009459
FLSC01003650
275590
Bacteroidota
CGT
Thr
>WENV180010429
FLSC01483073
275590
Bacteroidota
CGT
Thr
>WENV180009701
FLSC01049934
453372
Bacteroidota
CTG
Gln
>WENV180009298
FLSC01000491
105933
Bacteroidota
CAG
Leu
>WENV180010165
FLSC01362571
258397
Bacteroidota
TTT
Lys
>WENV180009280
FLSC01000416
325106
Bacteroidota
CGG
Pro
>WENV180009531
FLSC01009523
325106
Bacteroidota
CGG
Pro
>WENV180010066
FLSC01267246
258200
Bacteroidota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
BACK