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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
115 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180010207
FLSC01406160
412480
Bacteroidota
>WENV180010428
FLSC01483072
412480
Bacteroidota
>WENV180009383
FLSC01002307
339412
Bacteroidota
GGT
Thr
>WENV180009409
FLSC01002589
339412
Bacteroidota
GGT
Thr
>WENV180009296
FLSC01000491
148097
Bacteroidota
TGG
Pro
>WENV180010119
FLSC01311419
148097
Bacteroidota
TGG
Pro
>WENV180010098
FLSC01300416
146761
Bacteroidota
GAT
Ile
>WENV180009294
FLSC01000491
237796
Bacteroidota
CGT
Thr
>WENV180009459
FLSC01003650
237796
Bacteroidota
CGT
Thr
>WENV180010429
FLSC01483073
237796
Bacteroidota
CGT
Thr
>WENV180009298
FLSC01000491
97336
Bacteroidota
CAG
Leu
>WENV180009985
FLSC01212396
119907
Bacteroidota
CAA
Leu
>WENV180009596
FLSC01022115
340120
Bacteroidota
CCT
Arg
>WENV180009447
FLSC01002897
340120
Bacteroidota
CCT
Arg
>WENV180009317
FLSC01000848
340120
Bacteroidota
CCT
Arg
>WENV180010399
FLSC01482994
24174
Bacteroidota
GCT
Ser
>WENV180010189
FLSC01386317
24174
Bacteroidota
GCT
Ser
>WENV180009959
FLSC01196924
338486
Bacteroidota
CAT
Met
>WENV180009401
FLSC01002578
394247
Bacteroidota
CTC
Glu
>WENV180009400
FLSC01002578
394247
Bacteroidota
CTC
Glu
>WENV180009269
FLSC01000262
394247
Bacteroidota
CTC
Glu
>WENV180009268
FLSC01000262
394247
Bacteroidota
CTC
Glu
>WENV180009267
FLSC01000262
394247
Bacteroidota
CTC
Glu
>WENV180010413
FLSC01483037
413663
Bacteroidota
CTG
Gln
>WENV180010234
FLSC01427510
136244
Bacteroidota
TAC
Val
>WENV180009658
FLSC01040067
136244
Bacteroidota
TAC
Val
>WENV180009657
FLSC01040067
136244
Bacteroidota
TAC
Val
>WENV180009488
FLSC01005406
136244
Bacteroidota
TAC
Val
>WENV180009272
FLSC01000328
136244
Bacteroidota
TAC
Val
>WENV180009271
FLSC01000328
136244
Bacteroidota
TAC
Val
>WENV180009410
FLSC01002589
237797
Bacteroidota
CCA
Trp
>WENV180009384
FLSC01002307
237797
Bacteroidota
CCA
Trp
>WENV180009364
FLSC01001955
237797
Bacteroidota
CCA
Trp
>WENV180010406
FLSC01483021
148096
Bacteroidota
GTG
His
>WENV180010219
FLSC01418252
148096
Bacteroidota
GTG
His
>WENV180009758
FLSC01075009
144695
Bacteroidota
CAT
Met
>WENV180009701
FLSC01049934
413952
Bacteroidota
>WENV180009781
FLSC01083163
238811
Bacteroidota
CAT
Met
>WENV180009755
FLSC01072693
238811
Bacteroidota
CAT
Met
>WENV180009469
FLSC01003708
238811
Bacteroidota
CAT
Met
>WENV180009250
FLSC01000031
238811
Bacteroidota
CAT
Met
>WENV180009836
FLSC01117058
412479
Bacteroidota
TTG
Gln
>WENV180009347
FLSC01001647
412479
Bacteroidota
TTG
Gln
>WENV180009318
FLSC01000848
412479
Bacteroidota
TTG
Gln
>WENV180009422
FLSC01002808
147147
Bacteroidota
GTG
His
>WENV180010401
FLSC01483005
155123
Bacteroidota
GTT
Asn
>WENV180010114
FLSC01310986
155123
Bacteroidota
GTT
Asn
>WENV180009725
FLSC01059627
155123
Bacteroidota
GTT
Asn
>WENV180009597
FLSC01022771
155123
Bacteroidota
GTT
Asn
>WENV180009539
FLSC01010092
155123
Bacteroidota
GTT
Asn
>WENV180009517
FLSC01008368
155123
Bacteroidota
GTT
Asn
>WENV180009259
FLSC01000179
155123
Bacteroidota
GTT
Asn
>WENV180010255
FLSC01440892
412439
Bacteroidota
CCA
Trp
>WENV180009531
FLSC01009523
238810
Bacteroidota
CGG
Pro
>WENV180009280
FLSC01000416
238810
Bacteroidota
CGG
Pro
>WENV180009555
FLSC01013102
193809
Bacteroidota
CAT
Met
>WENV180010405
FLSC01483019
127253
Bacteroidota
GGG
Pro
>WENV180010233
FLSC01427104
127253
Bacteroidota
GGG
Pro
>WENV180009352
FLSC01001748
127253
Bacteroidota
GGG
Pro
>WENV180010062
FLSC01263169
37076
Bacteroidota
TAA
Leu
>WENV180009316
FLSC01000848
37076
Bacteroidota
TAA
Leu
>WENV180009262
FLSC01000241
37076
Bacteroidota
TAA
Leu
>WENV180010155
FLSC01354257
37076
Bacteroidota
TAA
Leu
>WENV180010078
FLSC01281056
343565
Bacteroidota
GTG
His
>WENV180009291
FLSC01000461
251266
Bacteroidota
CTT
Lys
>WENV180009290
FLSC01000461
251266
Bacteroidota
CTT
Lys
>WENV180009289
FLSC01000461
251266
Bacteroidota
CTT
Lys
>WENV180009991
FLSC01214179
244295
Bacteroidota
CCA
Trp
>WENV180009530
FLSC01009322
339634
Bacteroidota
CCT
Arg
>WENV180009833
FLSC01115744
414526
Bacteroidota
GCA
Cys
>WENV180009648
FLSC01036663
388940
Bacteroidota
CCT
Arg
>WENV180010164
FLSC01362356
81773
Bacteroidota
CAG
Leu
>WENV180009275
FLSC01000391
96147
Bacteroidota
TAG
Leu
>WENV180009420
FLSC01002775
412235
Bacteroidota
>WENV180009910
FLSC01155880
339996
Bacteroidota
TTC
Glu
>WENV180009378
FLSC01002247
339996
Bacteroidota
TTC
Glu
>WENV180010370
FLSC01482891
147148
Bacteroidota
CAT
Met
>WENV180009421
FLSC01002804
147148
Bacteroidota
CAT
Met
>WENV180009258
FLSC01000147
419272
Bacteroidota
CTG
Gln
>WENV180010289
FLSC01455377
59182
Bacteroidota
GAG
Leu
>WENV180010005
FLSC01221270
144639
Bacteroidota
GGC
Ala
>WENV180009680
FLSC01045288
151121
Bacteroidota
CAT
Met
>WENV180009659
FLSC01040694
151121
Bacteroidota
CAT
Met
>WENV180009853
FLSC01127088
139743
Bacteroidota
GGG
Pro
>WENV180010238
FLSC01432034
240012
Bacteroidota
CCC
Gly
>WENV180010073
FLSC01275102
95954
Bacteroidota
TAG
Leu
>WENV180009332
FLSC01001170
127951
Bacteroidota
TAC
Val
>WENV180010241
FLSC01433007
95986
Bacteroidota
GTA
Tyr
>WENV180009637
FLSC01032905
95986
Bacteroidota
GTA
Tyr
>WENV180009489
FLSC01005406
95986
Bacteroidota
GTA
Tyr
>WENV180009408
FLSC01002589
95986
Bacteroidota
GTA
Tyr
>WENV180009382
FLSC01002307
95986
Bacteroidota
GTA
Tyr
>WENV180009381
FLSC01002307
95986
Bacteroidota
GTA
Tyr
>WENV180010398
FLSC01482993
16494
Bacteroidota
GGA
Ser
>WENV180010325
FLSC01479821
196394
Bacteroidota
GTC
Asp
>WENV180010324
FLSC01479821
196394
Bacteroidota
GTC
Asp
>WENV180009491
FLSC01005428
196394
Bacteroidota
GTC
Asp
>WENV180009454
FLSC01003062
196394
Bacteroidota
GTC
Asp
>WENV180009453
FLSC01003062
196394
Bacteroidota
GTC
Asp
>WENV180010165
FLSC01362571
238607
Bacteroidota
TTT
Lys
>WENV180009506
FLSC01007226
146762
Bacteroidota
TGG
Pro
>WENV180010245
FLSC01437408
412236
Bacteroidota
CCC
Gly
>WENV180009295
FLSC01000491
412236
Bacteroidota
CCC
Gly
>WENV180009532
FLSC01009742
146764
Bacteroidota
GTC
Asp
>WENV180010274
FLSC01447768
59498
Bacteroidota
GAG
Leu
>WENV180009299
FLSC01000491
59498
Bacteroidota
GAG
Leu
>WENV180009709
FLSC01054565
413953
Bacteroidota
GCA
Cys
>WENV180009940
FLSC01184031
414472
Bacteroidota
TTG
Gln
>WENV180009884
FLSC01143709
302002
Bacteroidota
CGT
Thr
>WENV180010378
FLSC01482912
127023
Bacteroidota
GGG
Pro
>WENV180010311
FLSC01472303
127023
Bacteroidota
GGG
Pro
>WENV180009458
FLSC01003621
235129
Bacteroidota
GCC
Gly
>WENV180010285
FLSC01455377
313363
Bacteroidota
GAA
Phe
>WENV180009643
FLSC01033565
313363
Bacteroidota
GAA
Phe
>WENV180009292
FLSC01000461
313363
Bacteroidota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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