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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
35 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170676890
LDZS01003043
242780
Bacillota
GGG
Pro
>WENV170676879
LDZS01002906
353424
Bacillota
GTT
Asn
>WENV170676895
LDZS01003104
342590
Bacillota
CGT
Thr
>WENV170676856
LDZS01002628
127807
Bacillota
CGG
Pro
>WENV170676891
LDZS01003048
258968
Bacillota
CCA
Trp
>WENV170676898
LDZS01003115
24334
Bacillota
TAA
Leu
>WENV170676532
LDZS01000855
353391
Bacillota
GCC
Gly
>WENV170676540
LDZS01001036
151759
Bacillota
>WENV170676884
LDZS01003001
240404
Bacillota
TAC
Val
>WENV170676878
LDZS01002904
242781
Bacillota
TGT
Thr
>WENV170676894
LDZS01003104
242777
Bacillota
GAA
Phe
>WENV170676522
LDZS01000604
242777
Bacillota
GAA
Phe
>WENV170676661
LDZS01001797
255013
Bacillota
GGT
Thr
>WENV170676892
LDZS01003075
240414
Bacillota
GGC
Ala
>WENV170676886
LDZS01003003
24335
Bacillota
TGA
Ser
>WENV170676887
LDZS01003003
4767
Bacillota
GCT
Ser
>WENV170676475
LDZS01000006
126732
Bacillota
GGG
Pro
>WENV170676893
LDZS01003104
151760
Bacillota
GTC
Asp
>WENV170676521
LDZS01000604
151760
Bacillota
GTC
Asp
>WENV170676882
LDZS01002996
152476
Bacillota
>WENV170676880
LDZS01002906
242775
Bacillota
CAT
Met
>WENV170676901
LDZS01003120
413478
Bacillota
CTG
Gln
>WENV170676900
LDZS01003115
166508
Bacillota
CAT
Met
>WENV170676883
LDZS01003001
242773
Bacillota
TGG
Pro
>WENV170676877
LDZS01002899
96864
Bacillota
GAG
Leu
>WENV170676902
LDZS01003120
242779
Bacillota
CTC
Glu
>WENV170676514
LDZS01000512
37525
Bacillota
CAA
Leu
>WENV170676881
LDZS01002930
151762
Bacillota
CCT
Arg
>WENV170676484
LDZS01000031
60203
Bacillota
CAG
Leu
>WENV170676885
LDZS01003001
81576
Bacillota
GTA
Tyr
>WENV170676896
LDZS01003104
81576
Bacillota
GTA
Tyr
>WENV170676897
LDZS01003104
240413
Bacillota
TTT
Lys
>WENV170676483
LDZS01000031
240413
Bacillota
TTT
Lys
>WENV170676476
LDZS01000015
254905
Bacillota
CGC
Ala
>WENV170676889
LDZS01003015
342589
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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