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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
71 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170676720
LDZS01002036
127183
Euryarchaeota
TGG
Pro
>WENV170676504
LDZS01000292
147801
Euryarchaeota
TAC
Val
>WENV170676682
LDZS01001898
80961
Euryarchaeota
TAA
Leu
>WENV170676719
LDZS01002036
147806
Euryarchaeota
TGT
Thr
>WENV170676741
LDZS01002098
147799
Euryarchaeota
GTG
His
>WENV170676694
LDZS01001953
147568
Euryarchaeota
GCC
Gly
>WENV170676707
LDZS01002002
62605
Euryarchaeota
TAG
Leu
>WENV170676685
LDZS01001902
147567
Euryarchaeota
GGC
Ala
>WENV170676969
LDZS01003822
59341
Euryarchaeota
TGA
Ser
>WENV170676558
LDZS01001556
147573
Euryarchaeota
TGC
Ala
>WENV170676541
LDZS01001060
147573
Euryarchaeota
TGC
Ala
>WENV170676713
LDZS01002030
127172
Euryarchaeota
>WENV170676509
LDZS01000335
127172
Euryarchaeota
>WENV170676735
LDZS01002065
127168
Euryarchaeota
GTC
Asp
>WENV170676586
LDZS01001656
238541
Euryarchaeota
GTT
Asn
>WENV170676702
LDZS01001983
351620
Euryarchaeota
GAC
Val
>WENV170676578
LDZS01001640
266373
Euryarchaeota
TGC
Ala
>WENV170676692
LDZS01001916
47224
Euryarchaeota
GGA
Ser
>WENV170676490
LDZS01000100
47224
Euryarchaeota
GGA
Ser
>WENV170676738
LDZS01002072
127180
Euryarchaeota
GTA
Tyr
>WENV170676730
LDZS01002050
127180
Euryarchaeota
GTA
Tyr
>WENV170676696
LDZS01001955
348437
Euryarchaeota
GCG
Arg
>WENV170676739
LDZS01002075
45255
Euryarchaeota
GGA
Ser
>WENV170676705
LDZS01002002
147570
Euryarchaeota
CAT
Met
>WENV170676717
LDZS01002035
147805
Euryarchaeota
TGC
Ala
>WENV170676722
LDZS01002036
339953
Euryarchaeota
GCA
Cys
>WENV170676723
LDZS01002036
127165
Euryarchaeota
GCG
Arg
>WENV170676687
LDZS01001915
163825
Euryarchaeota
TGT
Thr
>WENV170676579
LDZS01001640
350749
Euryarchaeota
GCA
Cys
>WENV170676734
LDZS01002060
127179
Euryarchaeota
GAT
Ile
>WENV170676699
LDZS01001968
127693
Euryarchaeota
CCT
Arg
>WENV170676724
LDZS01002036
45252
Euryarchaeota
TAA
Leu
>WENV170676706
LDZS01002002
130311
Euryarchaeota
TTC
Glu
>WENV170676965
LDZS01003793
127169
Euryarchaeota
TTC
Glu
>WENV170676967
LDZS01003814
147802
Euryarchaeota
CGT
Thr
>WENV170676966
LDZS01003807
147802
Euryarchaeota
CGT
Thr
>WENV170676542
LDZS01001062
147802
Euryarchaeota
CGT
Thr
>WENV170676690
LDZS01001915
339836
Euryarchaeota
GTC
Asp
>WENV170676714
LDZS01002030
45254
Euryarchaeota
CAA
Leu
>WENV170676698
LDZS01001968
129313
Euryarchaeota
>WENV170676684
LDZS01001901
123294
Euryarchaeota
TCG
Arg
>WENV170676746
LDZS01002112
59340
Euryarchaeota
CGA
Ser
>WENV170676742
LDZS01002103
59340
Euryarchaeota
CGA
Ser
>WENV170676697
LDZS01001963
59340
Euryarchaeota
CGA
Ser
>WENV170676732
LDZS01002058
127182
Euryarchaeota
>WENV170676728
LDZS01002043
127182
Euryarchaeota
>WENV170676680
LDZS01001897
358256
Euryarchaeota
>WENV170676495
LDZS01000189
127175
Euryarchaeota
GCC
Gly
>WENV170676704
LDZS01002002
238271
Euryarchaeota
GTT
Asn
>WENV170676715
LDZS01002031
238529
Euryarchaeota
>WENV170676743
LDZS01002107
127164
Euryarchaeota
CTT
Lys
>WENV170676731
LDZS01002057
245516
Euryarchaeota
CTG
Gln
>WENV170676703
LDZS01001983
238275
Euryarchaeota
GAA
Phe
>WENV170676549
LDZS01001209
238275
Euryarchaeota
GAA
Phe
>WENV170676486
LDZS01000042
147800
Euryarchaeota
GAA
Phe
>WENV170676679
LDZS01001897
339840
Euryarchaeota
>WENV170676968
LDZS01003815
131310
Euryarchaeota
GGG
Pro
>WENV170676740
LDZS01002087
127177
Euryarchaeota
CAT
Met
>WENV170676970
LDZS01003831
47415
Euryarchaeota
>WENV170676716
LDZS01002034
127174
Euryarchaeota
TTT
Lys
>WENV170676744
LDZS01002107
45253
Euryarchaeota
>WENV170676736
LDZS01002068
45253
Euryarchaeota
>WENV170676561
LDZS01001628
127190
Euryarchaeota
CAT
Met
>WENV170676491
LDZS01000101
45224
Euryarchaeota
GGA
Ser
>WENV170676726
LDZS01002036
127166
Euryarchaeota
CAT
Met
>WENV170676729
LDZS01002048
147798
Euryarchaeota
GGT
Thr
>WENV170676733
LDZS01002060
127178
Euryarchaeota
>WENV170676721
LDZS01002036
59342
Euryarchaeota
GCT
Ser
>WENV170676688
LDZS01001915
127134
Euryarchaeota
TGG
Pro
>WENV170676686
LDZS01001903
59292
Euryarchaeota
GAG
Leu
>WENV170676691
LDZS01001915
153995
Euryarchaeota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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