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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
30 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170759530
LUMT01000003
202065
Alphaproteobacteria
CCT
Arg
>WENV170759537
LUMT01000003
195158
Alphaproteobacteria
GTC
Asp
>WENV170759623
LUMT01000042
448085
Alphaproteobacteria
TCC
Gly
>WENV170760112
LUMT01003673
214179
Alphaproteobacteria
CCT
Arg
>WENV170759531
LUMT01000003
28144
Alphaproteobacteria
TGA
Ser
>WENV170759685
LUMT01000165
448544
Alphaproteobacteria
CTG
Gln
>WENV170759512
LUMT01000002
466200
Alphaproteobacteria
TCC
Gly
>WENV170760432
LUMT01016033
369667
Alphaproteobacteria
GGT
Thr
>WENV170760321
LUMT01010081
65727
Alphaproteobacteria
GAG
Leu
>WENV170760085
LUMT01003037
159552
Alphaproteobacteria
TGG
Pro
>WENV170759527
LUMT01000002
291340
Alphaproteobacteria
CGT
Thr
>WENV170759580
LUMT01000016
448084
Alphaproteobacteria
GCA
Cys
>WENV170759554
LUMT01000006
271603
Alphaproteobacteria
TGT
Thr
>WENV170759997
LUMT01001816
448267
Alphaproteobacteria
GCA
Cys
>WENV170759504
LUMT01000002
383286
Alphaproteobacteria
GGT
Thr
>WENV170759622
LUMT01000042
383286
Alphaproteobacteria
GGT
Thr
>WENV170760367
LUMT01011758
406362
Alphaproteobacteria
GAA
Phe
>WENV170760131
LUMT01004135
93190
Alphaproteobacteria
CAA
Leu
>WENV170759505
LUMT01000002
158952
Alphaproteobacteria
ACG
Arg
>WENV170759506
LUMT01000002
115145
Alphaproteobacteria
CAA
Leu
>WENV170759538
LUMT01000003
107829
Alphaproteobacteria
CAA
Leu
>WENV170759521
LUMT01000002
27695
Alphaproteobacteria
TGA
Ser
>WENV170759973
LUMT01001558
377113
Alphaproteobacteria
GAC
Val
>WENV170759551
LUMT01000006
382630
Alphaproteobacteria
GAC
Val
>WENV170759514
LUMT01000002
26345
Alphaproteobacteria
GCT
Ser
>WENV170760204
LUMT01005915
205335
Alphaproteobacteria
GGG
Pro
>WENV170759549
LUMT01000006
391624
Alphaproteobacteria
TTG
Gln
>WENV170759526
LUMT01000002
373569
Alphaproteobacteria
GTT
Asn
>WENV170760700
LUMT01047457
26306
Alphaproteobacteria
TGA
Ser
>WENV170759570
LUMT01000013
65064
Alphaproteobacteria
GAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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