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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
23 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV171003720
NNBV01000508
254595
Alphaproteobacteria
GAA
Phe
>WENV171003784
NNBV01000766
126988
Alphaproteobacteria
GGG
Pro
>WENV171003902
NNBV01004661
237493
Alphaproteobacteria
CCA
Trp
>WENV171003932
NNBV01004676
412798
Alphaproteobacteria
CTG
Gln
>WENV171003751
NNBV01000600
29895
Alphaproteobacteria
TGA
Ser
>WENV171003925
NNBV01004670
237489
Alphaproteobacteria
CAT
Met
>WENV171003893
NNBV01004661
146875
Alphaproteobacteria
GTG
His
>WENV171003769
NNBV01000699
199776
Alphaproteobacteria
CGG
Pro
>WENV171003760
NNBV01000658
202487
Alphaproteobacteria
CAT
Met
>WENV171003898
NNBV01004661
95928
Alphaproteobacteria
TAG
Leu
>WENV171003923
NNBV01004670
385404
Alphaproteobacteria
CTC
Glu
>WENV171003942
NNBV01004745
251610
Alphaproteobacteria
TGC
Ala
>WENV171003900
NNBV01004661
74116
Alphaproteobacteria
CAG
Leu
>WENV171003694
NNBV01000276
95946
Alphaproteobacteria
GTA
Tyr
>WENV171003818
NNBV01001290
23538
Alphaproteobacteria
CGA
Ser
>WENV171003827
NNBV01001500
146929
Alphaproteobacteria
CCG
Arg
>WENV171003816
NNBV01001243
338268
Alphaproteobacteria
GAC
Val
>WENV171003808
NNBV01001047
175860
Alphaproteobacteria
CCT
Arg
>WENV171003800
NNBV01000929
279830
Alphaproteobacteria
TAC
Val
>WENV171003761
NNBV01000658
237571
Alphaproteobacteria
CAT
Met
>WENV171003753
NNBV01000600
146927
Alphaproteobacteria
TGG
Pro
>WENV171003722
NNBV01000517
146926
Alphaproteobacteria
GTG
His
>WENV171003817
NNBV01001243
388882
Alphaproteobacteria
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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