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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
87 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180246003
OBDN01009741
196621
Bacillota
GTC
Asp
>WENV180246118
OBDN01021979
196621
Bacillota
GTC
Asp
>WENV180246361
OBDN01156575
202812
Bacillota
CAT
Met
>WENV180245905
OBDN01003183
155113
Bacillota
CGG
Pro
>WENV180246024
OBDN01012277
144612
Bacillota
TCT
Arg
>WENV180245845
OBDN01001666
235098
Bacillota
GAC
Val
>WENV180246043
OBDN01013545
235098
Bacillota
GAC
Val
>WENV180246180
OBDN01037319
338152
Bacillota
TTC
Glu
>WENV180246010
OBDN01010308
44854
Bacillota
TGA
Ser
>WENV180246354
OBDN01148883
144577
Bacillota
GAT
Ile
>WENV180246237
OBDN01054502
37071
Bacillota
TGA
Ser
>WENV180245822
OBDN01001083
37071
Bacillota
TGA
Ser
>WENV180246004
OBDN01009741
304022
Bacillota
GCC
Gly
>WENV180245635
OBDN01000009
59312
Bacillota
CAG
Leu
>WENV180246413
OBDN01203714
238910
Bacillota
CTT
Lys
>WENV180246139
OBDN01026829
238910
Bacillota
CTT
Lys
>WENV180245675
OBDN01000059
338147
Bacillota
CTC
Glu
>WENV180245648
OBDN01000024
338147
Bacillota
CTC
Glu
>WENV180245646
OBDN01000019
338147
Bacillota
CTC
Glu
>WENV180246410
OBDN01202396
235150
Bacillota
TGC
Ala
>WENV180245759
OBDN01000268
235114
Bacillota
TTT
Lys
>WENV180245707
OBDN01000112
235114
Bacillota
TTT
Lys
>WENV180246338
OBDN01137696
198770
Bacillota
GTC
Asp
>WENV180245960
OBDN01005166
429429
Bacillota
CCA
Trp
>WENV180246060
OBDN01015758
41154
Bacillota
TAA
Leu
>WENV180245634
OBDN01000009
44859
Bacillota
AAG
Leu
>WENV180245633
OBDN01000009
44859
Bacillota
AAG
Leu
>WENV180246045
OBDN01013766
11034
Bacillota
GGA
Ser
>WENV180246002
OBDN01009741
235117
Bacillota
TAC
Val
>WENV180246335
OBDN01135190
247057
Bacillota
TGC
Ala
>WENV180245664
OBDN01000050
156937
Bacillota
GTG
His
>WENV180246400
OBDN01201864
235079
Bacillota
GAA
Phe
>WENV180246366
OBDN01165835
16266
Bacillota
GCT
Ser
>WENV180246026
OBDN01012430
235087
Bacillota
TGC
Ala
>WENV180246404
OBDN01201976
338149
Bacillota
CTC
Glu
>WENV180245816
OBDN01001027
338149
Bacillota
CTC
Glu
>WENV180245855
OBDN01001998
245298
Bacillota
CGG
Pro
>WENV180245745
OBDN01000240
37269
Bacillota
TGA
Ser
>WENV180245825
OBDN01001165
169968
Bacillota
CAT
Met
>WENV180246327
OBDN01131433
169968
Bacillota
CAT
Met
>WENV180245857
OBDN01002060
413152
Bacillota
TCC
Gly
>WENV180246250
OBDN01060317
162445
Bacillota
CAT
Met
>WENV180246339
OBDN01138442
152492
Bacillota
GGG
Pro
>WENV180245892
OBDN01002811
235078
Bacillota
TAC
Val
>WENV180245888
OBDN01002811
235078
Bacillota
TAC
Val
>WENV180246408
OBDN01202334
144610
Bacillota
GTG
His
>WENV180245757
OBDN01000268
144610
Bacillota
GTG
His
>WENV180245895
OBDN01002811
240017
Bacillota
GCC
Gly
>WENV180245891
OBDN01002811
240017
Bacillota
GCC
Gly
>WENV180246159
OBDN01030467
411547
Bacillota
CTG
Gln
>WENV180246147
OBDN01028385
411547
Bacillota
CTG
Gln
>WENV180245854
OBDN01001998
411547
Bacillota
CTG
Gln
>WENV180246011
OBDN01010308
4624
Bacillota
GCT
Ser
>WENV180246322
OBDN01128733
235095
Bacillota
GGT
Thr
>WENV180246119
OBDN01021979
235095
Bacillota
GGT
Thr
>WENV180245842
OBDN01001575
235095
Bacillota
GGT
Thr
>WENV180246039
OBDN01013199
152151
Bacillota
TCT
Arg
>WENV180245990
OBDN01007986
411549
Bacillota
TTG
Gln
>WENV180245765
OBDN01000297
235142
Bacillota
CTT
Lys
>WENV180245640
OBDN01000013
235142
Bacillota
CTT
Lys
>WENV180246138
OBDN01026641
148188
Bacillota
CCG
Arg
>WENV180246300
OBDN01099916
235127
Bacillota
TTT
Lys
>WENV180245847
OBDN01001870
163943
Bacillota
GTC
Asp
>WENV180246123
OBDN01022463
235124
Bacillota
TGG
Pro
>WENV180245792
OBDN01000658
338129
Bacillota
TGT
Thr
>WENV180246162
OBDN01031179
144583
Bacillota
ACG
Arg
>WENV180246403
OBDN01201957
144652
Bacillota
GTC
Asp
>WENV180245951
OBDN01004762
247734
Bacillota
TGC
Ala
>WENV180246169
OBDN01033885
235171
Bacillota
CCA
Trp
>WENV180245944
OBDN01004490
144621
Bacillota
GTT
Asn
>WENV180245817
OBDN01001027
144621
Bacillota
GTT
Asn
>WENV180245706
OBDN01000112
235113
Bacillota
GAA
Phe
>WENV180245643
OBDN01000017
235113
Bacillota
GAA
Phe
>WENV180245950
OBDN01004745
58712
Bacillota
CAG
Leu
>WENV180245777
OBDN01000388
58712
Bacillota
CAG
Leu
>WENV180245934
OBDN01004290
245296
Bacillota
CCC
Gly
>WENV180246132
OBDN01025297
272992
Bacillota
CTT
Lys
>WENV180246293
OBDN01097745
196632
Bacillota
GTC
Asp
>WENV180246094
OBDN01018582
299139
Bacillota
TGC
Ala
>WENV180245837
OBDN01001353
144594
Bacillota
CAC
Val
>WENV180245704
OBDN01000112
95563
Bacillota
GTA
Tyr
>WENV180245663
OBDN01000047
95563
Bacillota
GTA
Tyr
>WENV180245826
OBDN01001165
272488
Bacillota
GAA
Phe
>WENV180245650
OBDN01000026
272488
Bacillota
GAA
Phe
>WENV180246224
OBDN01051347
114075
Bacillota
TAG
Leu
>WENV180246279
OBDN01083388
338128
Bacillota
TTC
Glu
>WENV180246129
OBDN01024638
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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