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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
114 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180571883
OCLT01000827
270475
Bacillota
GAA
Phe
>WENV180571230
OCLT01000021
6892
Bacillota
CGA
Ser
>WENV180571384
OCLT01000072
235908
Bacillota
GGT
Thr
>WENV180571912
OCLT01000891
37090
Bacillota
TAA
Leu
>WENV180571523
OCLT01000155
37110
Bacillota
TAA
Leu
>WENV180571526
OCLT01000155
37110
Bacillota
TAA
Leu
>WENV180571529
OCLT01000155
37110
Bacillota
TAA
Leu
>WENV180571531
OCLT01000155
37110
Bacillota
TAA
Leu
>WENV180571533
OCLT01000155
37110
Bacillota
TAA
Leu
>WENV180571420
OCLT01000099
95695
Bacillota
GTA
Tyr
>WENV180571423
OCLT01000099
95695
Bacillota
GTA
Tyr
>WENV180571426
OCLT01000099
95695
Bacillota
GTA
Tyr
>WENV180571543
OCLT01000161
338227
Bacillota
CCT
Arg
>WENV180571795
OCLT01000515
338544
Bacillota
TGT
Thr
>WENV180571425
OCLT01000099
338544
Bacillota
TGT
Thr
>WENV180571422
OCLT01000099
338544
Bacillota
TGT
Thr
>WENV180571975
OCLT01001277
305466
Bacillota
GTG
His
>WENV180571411
OCLT01000092
235535
Bacillota
>WENV180571774
OCLT01000447
106079
Bacillota
TAG
Leu
>WENV180571514
OCLT01000151
411591
Bacillota
GGT
Thr
>WENV180571621
OCLT01000246
147639
Bacillota
ACG
Arg
>WENV180571203
OCLT01000017
413601
Bacillota
GCA
Cys
>WENV180571902
OCLT01000886
235903
Bacillota
TTT
Lys
>WENV180571860
OCLT01000692
235903
Bacillota
TTT
Lys
>WENV180571838
OCLT01000651
235903
Bacillota
TTT
Lys
>WENV180571473
OCLT01000124
235903
Bacillota
TTT
Lys
>WENV180571681
OCLT01000308
23437
Bacillota
GGA
Ser
>WENV180571114
OCLT01000004
20559
Bacillota
GCT
Ser
>WENV180571170
OCLT01000013
302152
Bacillota
CTT
Lys
>WENV180571169
OCLT01000013
302152
Bacillota
CTT
Lys
>WENV180571522
OCLT01000155
338552
Bacillota
ACG
Arg
>WENV180571906
OCLT01000886
235902
Bacillota
CTT
Lys
>WENV180571859
OCLT01000692
235902
Bacillota
CTT
Lys
>WENV180571901
OCLT01000886
338557
Bacillota
TTG
Gln
>WENV180571837
OCLT01000651
338557
Bacillota
TTG
Gln
>WENV180571472
OCLT01000124
338557
Bacillota
TTG
Gln
>WENV180571248
OCLT01000027
235534
Bacillota
GAC
Val
>WENV180571950
OCLT01001071
116350
Bacillota
TAG
Leu
>WENV180571794
OCLT01000515
186380
Bacillota
GTC
Asp
>WENV180571501
OCLT01000141
58829
Bacillota
CAA
Leu
>WENV180571188
OCLT01000017
58766
Bacillota
GAG
Leu
>WENV180571890
OCLT01000881
145264
Bacillota
CAT
Met
>WENV180571395
OCLT01000077
96360
Bacillota
GTA
Tyr
>WENV180571201
OCLT01000017
338342
Bacillota
TTG
Gln
>WENV180571913
OCLT01000891
144988
Bacillota
ACG
Arg
>WENV180571492
OCLT01000134
173314
Bacillota
GAT
Ile
>WENV180571198
OCLT01000017
113622
Bacillota
GTA
Tyr
>WENV180571191
OCLT01000017
113622
Bacillota
GTA
Tyr
>WENV180571892
OCLT01000881
6891
Bacillota
>WENV180571680
OCLT01000308
338555
Bacillota
CCT
Arg
>WENV180571793
OCLT01000515
243345
Bacillota
GAA
Phe
>WENV180571506
OCLT01000146
243345
Bacillota
GAA
Phe
>WENV180571382
OCLT01000072
243345
Bacillota
GAA
Phe
>WENV180571961
OCLT01001098
16256
Bacillota
GCT
Ser
>WENV180571385
OCLT01000072
95696
Bacillota
TAG
Leu
>WENV180571462
OCLT01000118
238745
Bacillota
CTT
Lys
>WENV180571816
OCLT01000552
145385
Bacillota
TCG
Arg
>WENV180571537
OCLT01000155
367412
Bacillota
GTT
Asn
>WENV180571536
OCLT01000155
367412
Bacillota
GTT
Asn
>WENV180571535
OCLT01000155
367412
Bacillota
GTT
Asn
>WENV180571419
OCLT01000099
367412
Bacillota
GTT
Asn
>WENV180571405
OCLT01000085
10779
Bacillota
CGA
Ser
>WENV180571948
OCLT01001047
47370
Bacillota
TAA
Leu
>WENV180571500
OCLT01000139
340986
Bacillota
CCT
Arg
>WENV180571619
OCLT01000244
41203
Bacillota
AAG
Leu
>WENV180571494
OCLT01000134
41203
Bacillota
AAG
Leu
>WENV180571904
OCLT01000886
338558
Bacillota
GCC
Gly
>WENV180571995
OCLT01002199
339391
Bacillota
TTC
Glu
>WENV180571909
OCLT01000891
235530
Bacillota
TTT
Lys
>WENV180571193
OCLT01000017
235530
Bacillota
TTT
Lys
>WENV180571972
OCLT01001188
283811
Bacillota
TGC
Ala
>WENV180571966
OCLT01001145
10568
Bacillota
GGA
Ser
>WENV180571905
OCLT01000886
411739
Bacillota
TCC
Gly
>WENV180571718
OCLT01000345
411739
Bacillota
TCC
Gly
>WENV180571469
OCLT01000124
411739
Bacillota
TCC
Gly
>WENV180571896
OCLT01000881
307577
Bacillota
GTG
His
>WENV180571192
OCLT01000017
338345
Bacillota
TTG
Gln
>WENV180571505
OCLT01000146
235506
Bacillota
TGC
Ala
>WENV180571908
OCLT01000891
235529
Bacillota
TGT
Thr
>WENV180571900
OCLT01000886
279635
Bacillota
GTG
His
>WENV180571836
OCLT01000651
279635
Bacillota
GTG
His
>WENV180571471
OCLT01000124
279635
Bacillota
GTG
His
>WENV180571571
OCLT01000193
338344
Bacillota
CCT
Arg
>WENV180571960
OCLT01001098
235533
Bacillota
GTT
Asn
>WENV180571410
OCLT01000092
235533
Bacillota
GTT
Asn
>WENV180571113
OCLT01000004
235533
Bacillota
GTT
Asn
>WENV180571204
OCLT01000017
72325
Bacillota
CAA
Leu
>WENV180571453
OCLT01000113
144795
Bacillota
GTT
Asn
>WENV180571520
OCLT01000155
17822
Bacillota
TGA
Ser
>WENV180571518
OCLT01000155
17822
Bacillota
TGA
Ser
>WENV180571631
OCLT01000256
16270
Bacillota
>WENV180571440
OCLT01000106
338225
Bacillota
CCG
Arg
>WENV180571899
OCLT01000886
145383
Bacillota
TCT
Arg
>WENV180571719
OCLT01000345
145383
Bacillota
TCT
Arg
>WENV180571470
OCLT01000124
145383
Bacillota
TCT
Arg
>WENV180571361
OCLT01000061
338553
Bacillota
CTC
Glu
>WENV180571903
OCLT01000886
95697
Bacillota
TAG
Leu
>WENV180571796
OCLT01000515
338545
Bacillota
>WENV180571202
OCLT01000017
338343
Bacillota
GCC
Gly
>WENV180571897
OCLT01000881
411647
Bacillota
TCC
Gly
>WENV180571117
OCLT01000004
411647
Bacillota
TCC
Gly
>WENV180571895
OCLT01000881
235532
Bacillota
GAA
Phe
>WENV180571197
OCLT01000017
235532
Bacillota
GAA
Phe
>WENV180571386
OCLT01000072
338556
Bacillota
CCC
Gly
>WENV180571404
OCLT01000085
81208
Bacillota
CAG
Leu
>WENV180571988
OCLT01002098
294589
Bacillota
TAC
Val
>WENV180571424
OCLT01000099
294589
Bacillota
TAC
Val
>WENV180571421
OCLT01000099
294589
Bacillota
TAC
Val
>WENV180571121
OCLT01000006
80673
Bacillota
GAG
Leu
>WENV180571598
OCLT01000221
44932
Bacillota
>WENV180571985
OCLT01001416
7065
Bacillota
GCT
Ser
>WENV180571200
OCLT01000017
235528
Bacillota
GTG
His
>WENV180571521
OCLT01000155
17824
Bacillota
GCT
Ser
>WENV180571519
OCLT01000155
17824
Bacillota
GCT
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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