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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
117 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180578549
OCMC01000111
24650
Bacillota
TAA
Leu
>WENV180578950
OCMC01008198
24650
Bacillota
TAA
Leu
>WENV180578901
OCMC01005626
144612
Bacillota
TCT
Arg
>WENV180579316
OCMC01139691
154063
Bacillota
CGG
Pro
>WENV180578856
OCMC01003470
246392
Bacillota
GTT
Asn
>WENV180578904
OCMC01005783
246392
Bacillota
GTT
Asn
>WENV180578879
OCMC01004423
235098
Bacillota
GAC
Val
>WENV180578946
OCMC01008019
235098
Bacillota
GAC
Val
>WENV180579078
OCMC01028948
235098
Bacillota
GAC
Val
>WENV180578545
OCMC01000103
338152
Bacillota
TTC
Glu
>WENV180578806
OCMC01002375
340263
Bacillota
TTC
Glu
>WENV180578794
OCMC01002229
44854
Bacillota
TGA
Ser
>WENV180578938
OCMC01007400
235154
Bacillota
GTT
Asn
>WENV180578762
OCMC01001470
425593
Bacillota
CCC
Gly
>WENV180578926
OCMC01006589
37549
Bacillota
TAA
Leu
>WENV180578799
OCMC01002375
148348
Bacillota
GTC
Asp
>WENV180579202
OCMC01074587
144577
Bacillota
GAT
Ile
>WENV180578658
OCMC01000360
37071
Bacillota
TGA
Ser
>WENV180578512
OCMC01000063
59312
Bacillota
CAG
Leu
>WENV180579301
OCMC01129143
238910
Bacillota
CTT
Lys
>WENV180578763
OCMC01001480
243119
Bacillota
CTT
Lys
>WENV180579097
OCMC01032084
338147
Bacillota
CTC
Glu
>WENV180578504
OCMC01000056
338147
Bacillota
CTC
Glu
>WENV180578449
OCMC01000017
338147
Bacillota
CTC
Glu
>WENV180578427
OCMC01000004
338147
Bacillota
CTC
Glu
>WENV180579011
OCMC01016567
235150
Bacillota
TGC
Ala
>WENV180578921
OCMC01006393
152047
Bacillota
GGG
Pro
>WENV180578958
OCMC01008966
16820
Bacillota
GCT
Ser
>WENV180579137
OCMC01045412
340802
Bacillota
TTG
Gln
>WENV180578815
OCMC01002509
152512
Bacillota
CCT
Arg
>WENV180578693
OCMC01000678
152459
Bacillota
GTC
Asp
>WENV180578606
OCMC01000212
235114
Bacillota
TTT
Lys
>WENV180578499
OCMC01000050
235114
Bacillota
TTT
Lys
>WENV180578948
OCMC01008198
144668
Bacillota
GTC
Asp
>WENV180578982
OCMC01012897
182792
Bacillota
GTC
Asp
>WENV180578776
OCMC01001606
182792
Bacillota
GTC
Asp
>WENV180578511
OCMC01000063
44859
Bacillota
AAG
Leu
>WENV180578510
OCMC01000063
44859
Bacillota
AAG
Leu
>WENV180579007
OCMC01015784
11034
Bacillota
GGA
Ser
>WENV180578775
OCMC01001606
235117
Bacillota
TAC
Val
>WENV180578800
OCMC01002375
239076
Bacillota
GAA
Phe
>WENV180578899
OCMC01005599
235697
Bacillota
GTT
Asn
>WENV180579069
OCMC01027987
274189
Bacillota
TGT
Thr
>WENV180578733
OCMC01000990
342736
Bacillota
TTG
Gln
>WENV180579378
OCMC01191884
235079
Bacillota
GAA
Phe
>WENV180578844
OCMC01003219
235079
Bacillota
GAA
Phe
>WENV180578777
OCMC01001606
235079
Bacillota
GAA
Phe
>WENV180578924
OCMC01006589
340265
Bacillota
GCC
Gly
>WENV180578903
OCMC01005783
340265
Bacillota
GCC
Gly
>WENV180578855
OCMC01003470
340265
Bacillota
GCC
Gly
>WENV180579201
OCMC01074587
235087
Bacillota
TGC
Ala
>WENV180579282
OCMC01116858
152513
Bacillota
GAC
Val
>WENV180578863
OCMC01003689
338149
Bacillota
CTC
Glu
>WENV180578735
OCMC01000995
338149
Bacillota
CTC
Glu
>WENV180578838
OCMC01003029
245298
Bacillota
CGG
Pro
>WENV180578994
OCMC01013997
37551
Bacillota
CGA
Ser
>WENV180578694
OCMC01000678
81644
Bacillota
GAG
Leu
>WENV180579271
OCMC01110744
413152
Bacillota
TCC
Gly
>WENV180579050
OCMC01024250
152492
Bacillota
GGG
Pro
>WENV180579080
OCMC01028976
153911
Bacillota
GAT
Ile
>WENV180578865
OCMC01003809
100326
Bacillota
GTA
Tyr
>WENV180578497
OCMC01000050
144610
Bacillota
GTG
His
>WENV180578837
OCMC01003029
411547
Bacillota
CTG
Gln
>WENV180578793
OCMC01002160
411547
Bacillota
CTG
Gln
>WENV180579168
OCMC01054638
147684
Bacillota
ACG
Arg
>WENV180578795
OCMC01002229
4624
Bacillota
GCT
Ser
>WENV180578906
OCMC01005783
248683
Bacillota
TTT
Lys
>WENV180578858
OCMC01003470
248683
Bacillota
TTT
Lys
>WENV180578890
OCMC01004897
243399
Bacillota
CCA
Trp
>WENV180578983
OCMC01012897
235095
Bacillota
GGT
Thr
>WENV180578857
OCMC01003470
344183
Bacillota
CTG
Gln
>WENV180578905
OCMC01005783
344183
Bacillota
CTG
Gln
>WENV180578925
OCMC01006589
419945
Bacillota
GCA
Cys
>WENV180578807
OCMC01002375
239079
Bacillota
TAC
Val
>WENV180578936
OCMC01007298
411549
Bacillota
TTG
Gln
>WENV180578884
OCMC01004603
152045
Bacillota
CAT
Met
>WENV180578907
OCMC01005783
243398
Bacillota
TTC
Glu
>WENV180578859
OCMC01003470
243398
Bacillota
TTC
Glu
>WENV180578553
OCMC01000120
235142
Bacillota
CTT
Lys
>WENV180578507
OCMC01000060
235142
Bacillota
CTT
Lys
>WENV180578886
OCMC01004702
37588
Bacillota
TGA
Ser
>WENV180579002
OCMC01015145
148188
Bacillota
CCG
Arg
>WENV180578853
OCMC01003415
148188
Bacillota
CCG
Arg
>WENV180578790
OCMC01002061
148188
Bacillota
CCG
Arg
>WENV180578869
OCMC01004057
152046
Bacillota
TCT
Arg
>WENV180579036
OCMC01020898
80612
Bacillota
GTA
Tyr
>WENV180578891
OCMC01004897
152051
Bacillota
ACG
Arg
>WENV180578830
OCMC01002816
243401
Bacillota
CGT
Thr
>WENV180579224
OCMC01082015
163943
Bacillota
GTC
Asp
>WENV180578814
OCMC01002436
235124
Bacillota
TGG
Pro
>WENV180578978
OCMC01012128
338129
Bacillota
TGT
Thr
>WENV180579130
OCMC01042913
157838
Bacillota
GTC
Asp
>WENV180579008
OCMC01016479
144583
Bacillota
ACG
Arg
>WENV180579269
OCMC01110579
144652
Bacillota
GTC
Asp
>WENV180579231
OCMC01085059
247734
Bacillota
TGC
Ala
>WENV180578894
OCMC01004970
235171
Bacillota
CCA
Trp
>WENV180578864
OCMC01003689
144621
Bacillota
GTT
Asn
>WENV180578816
OCMC01002616
144621
Bacillota
GTT
Asn
>WENV180578736
OCMC01000995
144621
Bacillota
GTT
Asn
>WENV180578605
OCMC01000212
235113
Bacillota
GAA
Phe
>WENV180578424
OCMC01000004
235113
Bacillota
GAA
Phe
>WENV180579379
OCMC01192458
58712
Bacillota
CAG
Leu
>WENV180578914
OCMC01006052
245296
Bacillota
CCC
Gly
>WENV180578850
OCMC01003324
245296
Bacillota
CCC
Gly
>WENV180579383
OCMC01193072
272992
Bacillota
CTT
Lys
>WENV180578883
OCMC01004603
281472
Bacillota
GGT
Thr
>WENV180579073
OCMC01028252
144594
Bacillota
CAC
Val
>WENV180578603
OCMC01000212
95563
Bacillota
GTA
Tyr
>WENV180578426
OCMC01000004
95563
Bacillota
GTA
Tyr
>WENV180578625
OCMC01000246
238945
Bacillota
GCC
Gly
>WENV180578624
OCMC01000246
238945
Bacillota
GCC
Gly
>WENV180578845
OCMC01003219
249259
Bacillota
GCC
Gly
>WENV180578778
OCMC01001606
249259
Bacillota
GCC
Gly
>WENV180578774
OCMC01001606
249259
Bacillota
GCC
Gly
>WENV180579386
OCMC01193126
273862
Bacillota
TGC
Ala
>WENV180579220
OCMC01080902
338128
Bacillota
TTC
Glu
>WENV180579148
OCMC01047498
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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