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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
69 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180632484
OCQZ01001120
144612
Bacillota
TCT
Arg
>WENV180632665
OCQZ01004526
235098
Bacillota
GAC
Val
>WENV180633320
OCQZ01203933
235098
Bacillota
GAC
Val
>WENV180633274
OCQZ01182749
338152
Bacillota
TTC
Glu
>WENV180632601
OCQZ01003078
44854
Bacillota
TGA
Ser
>WENV180632933
OCQZ01032684
235154
Bacillota
GTT
Asn
>WENV180632959
OCQZ01037496
144577
Bacillota
GAT
Ile
>WENV180632943
OCQZ01033988
340802
Bacillota
TTG
Gln
>WENV180632987
OCQZ01042402
144668
Bacillota
GTC
Asp
>WENV180632763
OCQZ01009790
182792
Bacillota
GTC
Asp
>WENV180632719
OCQZ01007151
182792
Bacillota
GTC
Asp
>WENV180632494
OCQZ01001335
11034
Bacillota
GGA
Ser
>WENV180633304
OCQZ01202908
235117
Bacillota
TAC
Val
>WENV180632393
OCQZ01000047
274189
Bacillota
TGT
Thr
>WENV180632761
OCQZ01009790
235079
Bacillota
GAA
Phe
>WENV180633317
OCQZ01203718
235087
Bacillota
TGC
Ala
>WENV180632754
OCQZ01009426
173314
Bacillota
GAT
Ile
>WENV180632849
OCQZ01017619
338149
Bacillota
CTC
Glu
>WENV180632791
OCQZ01012621
338149
Bacillota
CTC
Glu
>WENV180632726
OCQZ01007460
338149
Bacillota
CTC
Glu
>WENV180632568
OCQZ01002543
338149
Bacillota
CTC
Glu
>WENV180632539
OCQZ01002098
338149
Bacillota
CTC
Glu
>WENV180632806
OCQZ01013411
245298
Bacillota
CGG
Pro
>WENV180633118
OCQZ01086253
37269
Bacillota
TGA
Ser
>WENV180633128
OCQZ01089375
169968
Bacillota
CAT
Met
>WENV180633240
OCQZ01152876
413152
Bacillota
TCC
Gly
>WENV180632942
OCQZ01033988
144610
Bacillota
GTG
His
>WENV180632805
OCQZ01013411
411547
Bacillota
CTG
Gln
>WENV180632764
OCQZ01009850
411547
Bacillota
CTG
Gln
>WENV180632602
OCQZ01003078
4624
Bacillota
GCT
Ser
>WENV180632904
OCQZ01025656
263765
Bacillota
TAC
Val
>WENV180632891
OCQZ01024139
248683
Bacillota
TTT
Lys
>WENV180632720
OCQZ01007151
235095
Bacillota
GGT
Thr
>WENV180632504
OCQZ01001543
235095
Bacillota
GGT
Thr
>WENV180632573
OCQZ01002623
241471
Bacillota
TGC
Ala
>WENV180633172
OCQZ01112144
419639
Bacillota
GCA
Cys
>WENV180632505
OCQZ01001562
411549
Bacillota
TTG
Gln
>WENV180633245
OCQZ01159724
154711
Bacillota
TGG
Pro
>WENV180632655
OCQZ01004270
148188
Bacillota
CCG
Arg
>WENV180632961
OCQZ01037775
163943
Bacillota
GTC
Asp
>WENV180633222
OCQZ01140339
249522
Bacillota
TAC
Val
>WENV180632695
OCQZ01005618
235124
Bacillota
TGG
Pro
>WENV180632649
OCQZ01004108
338129
Bacillota
TGT
Thr
>WENV180633145
OCQZ01098361
157838
Bacillota
GTC
Asp
>WENV180632690
OCQZ01005461
149274
Bacillota
>WENV180632810
OCQZ01013491
144583
Bacillota
ACG
Arg
>WENV180632518
OCQZ01001680
236037
Bacillota
GTG
His
>WENV180633064
OCQZ01058999
247734
Bacillota
TGC
Ala
>WENV180632800
OCQZ01013009
235171
Bacillota
CCA
Trp
>WENV180632850
OCQZ01017619
144621
Bacillota
GTT
Asn
>WENV180632792
OCQZ01012621
144621
Bacillota
GTT
Asn
>WENV180632492
OCQZ01001296
144621
Bacillota
GTT
Asn
>WENV180632999
OCQZ01043229
243098
Bacillota
GGT
Thr
>WENV180632945
OCQZ01034326
58712
Bacillota
CAG
Leu
>WENV180632727
OCQZ01007460
272992
Bacillota
CTT
Lys
>WENV180632569
OCQZ01002543
272992
Bacillota
CTT
Lys
>WENV180632540
OCQZ01002098
272992
Bacillota
CTT
Lys
>WENV180632667
OCQZ01004562
344240
Bacillota
GCC
Gly
>WENV180632368
OCQZ01000011
248965
Bacillota
GCC
Gly
>WENV180632941
OCQZ01033988
157635
Bacillota
TCT
Arg
>WENV180632804
OCQZ01013331
144594
Bacillota
CAC
Val
>WENV180632630
OCQZ01003642
144594
Bacillota
CAC
Val
>WENV180633129
OCQZ01089375
272488
Bacillota
GAA
Phe
>WENV180633105
OCQZ01079783
114075
Bacillota
TAG
Leu
>WENV180633266
OCQZ01178624
238945
Bacillota
GCC
Gly
>WENV180632762
OCQZ01009790
249259
Bacillota
GCC
Gly
>WENV180633017
OCQZ01047204
338128
Bacillota
TTC
Glu
>WENV180632547
OCQZ01002212
338128
Bacillota
TTC
Glu
>WENV180632564
OCQZ01002471
245344
Bacillota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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