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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
114 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180639538
OCRL01000022
6892
Bacillota
CGA
Ser
>WENV180639698
OCRL01000074
235908
Bacillota
GGT
Thr
>WENV180640188
OCRL01000891
37090
Bacillota
TAA
Leu
>WENV180639826
OCRL01000153
37110
Bacillota
TAA
Leu
>WENV180639829
OCRL01000153
37110
Bacillota
TAA
Leu
>WENV180639832
OCRL01000153
37110
Bacillota
TAA
Leu
>WENV180640302
OCRL01001946
95695
Bacillota
GTA
Tyr
>WENV180639837
OCRL01000156
338227
Bacillota
CCT
Arg
>WENV180639550
OCRL01000027
397181
Bacillota
CCG
Arg
>WENV180640263
OCRL01001054
338544
Bacillota
TGT
Thr
>WENV180640094
OCRL01000512
338544
Bacillota
TGT
Thr
>WENV180640255
OCRL01001008
439732
Bacillota
>WENV180639708
OCRL01000079
235535
Bacillota
>WENV180639817
OCRL01000149
411591
Bacillota
GGT
Thr
>WENV180639637
OCRL01000050
147639
Bacillota
ACG
Arg
>WENV180640194
OCRL01000905
235903
Bacillota
TTT
Lys
>WENV180640149
OCRL01000686
235903
Bacillota
TTT
Lys
>WENV180640130
OCRL01000644
235903
Bacillota
TTT
Lys
>WENV180639767
OCRL01000122
235903
Bacillota
TTT
Lys
>WENV180639985
OCRL01000299
23437
Bacillota
GGA
Ser
>WENV180639430
OCRL01000004
20559
Bacillota
GCT
Ser
>WENV180639493
OCRL01000013
302152
Bacillota
CTT
Lys
>WENV180639492
OCRL01000013
302152
Bacillota
CTT
Lys
>WENV180639491
OCRL01000013
302152
Bacillota
CTT
Lys
>WENV180639825
OCRL01000153
338552
Bacillota
ACG
Arg
>WENV180640148
OCRL01000686
235902
Bacillota
CTT
Lys
>WENV180640193
OCRL01000905
338557
Bacillota
TTG
Gln
>WENV180640129
OCRL01000644
338557
Bacillota
TTG
Gln
>WENV180639766
OCRL01000122
338557
Bacillota
TTG
Gln
>WENV180639536
OCRL01000021
235534
Bacillota
GAC
Val
>WENV180640221
OCRL01000958
116350
Bacillota
TAG
Leu
>WENV180640242
OCRL01000997
322812
Bacillota
TGT
Thr
>WENV180640093
OCRL01000512
186380
Bacillota
GTC
Asp
>WENV180640014
OCRL01000335
186380
Bacillota
GTC
Asp
>WENV180639651
OCRL01000054
58829
Bacillota
CAA
Leu
>WENV180639610
OCRL01000039
58766
Bacillota
GAG
Leu
>WENV180640175
OCRL01000882
145264
Bacillota
CAT
Met
>WENV180640122
OCRL01000614
96360
Bacillota
GTA
Tyr
>WENV180639714
OCRL01000083
96360
Bacillota
GTA
Tyr
>WENV180639720
OCRL01000084
338342
Bacillota
TTG
Gln
>WENV180640189
OCRL01000891
144988
Bacillota
ACG
Arg
>WENV180639775
OCRL01000125
173314
Bacillota
GAT
Ile
>WENV180640275
OCRL01001114
316443
Bacillota
GTC
Asp
>WENV180639785
OCRL01000130
322995
Bacillota
GTC
Asp
>WENV180640177
OCRL01000882
6891
Bacillota
>WENV180639984
OCRL01000299
338555
Bacillota
CCT
Arg
>WENV180640092
OCRL01000512
243345
Bacillota
GAA
Phe
>WENV180639814
OCRL01000148
243345
Bacillota
GAA
Phe
>WENV180639696
OCRL01000074
243345
Bacillota
GAA
Phe
>WENV180640262
OCRL01001054
312468
Bacillota
TAC
Val
>WENV180640013
OCRL01000335
312468
Bacillota
TAC
Val
>WENV180639437
OCRL01000004
16256
Bacillota
GCT
Ser
>WENV180640164
OCRL01000776
109476
Bacillota
TAG
Leu
>WENV180639633
OCRL01000050
109476
Bacillota
TAG
Leu
>WENV180639699
OCRL01000074
95696
Bacillota
TAG
Leu
>WENV180639803
OCRL01000136
238745
Bacillota
CTT
Lys
>WENV180640107
OCRL01000544
145385
Bacillota
TCG
Arg
>WENV180639937
OCRL01000253
367412
Bacillota
GTT
Asn
>WENV180639836
OCRL01000153
367412
Bacillota
GTT
Asn
>WENV180639835
OCRL01000153
367412
Bacillota
GTT
Asn
>WENV180639834
OCRL01000153
367412
Bacillota
GTT
Asn
>WENV180639730
OCRL01000090
10779
Bacillota
CGA
Ser
>WENV180640260
OCRL01001044
47370
Bacillota
TAA
Leu
>WENV180639547
OCRL01000027
340986
Bacillota
CCT
Arg
>WENV180639920
OCRL01000241
41203
Bacillota
AAG
Leu
>WENV180639777
OCRL01000125
41203
Bacillota
AAG
Leu
>WENV180640196
OCRL01000905
338558
Bacillota
GCC
Gly
>WENV180640119
OCRL01000614
339391
Bacillota
TTC
Glu
>WENV180639846
OCRL01000166
339391
Bacillota
TTC
Glu
>WENV180640185
OCRL01000891
235530
Bacillota
TTT
Lys
>WENV180639718
OCRL01000084
235530
Bacillota
TTT
Lys
>WENV180640285
OCRL01001164
283811
Bacillota
TGC
Ala
>WENV180640278
OCRL01001127
10568
Bacillota
GGA
Ser
>WENV180640197
OCRL01000905
411739
Bacillota
TCC
Gly
>WENV180640029
OCRL01000342
411739
Bacillota
TCC
Gly
>WENV180639763
OCRL01000122
411739
Bacillota
TCC
Gly
>WENV180640181
OCRL01000882
307577
Bacillota
GTG
His
>WENV180640284
OCRL01001146
338345
Bacillota
TTG
Gln
>WENV180639813
OCRL01000148
235506
Bacillota
TGC
Ala
>WENV180640184
OCRL01000891
235529
Bacillota
TGT
Thr
>WENV180640111
OCRL01000551
79349
Bacillota
CAA
Leu
>WENV180639919
OCRL01000241
79349
Bacillota
CAA
Leu
>WENV180640192
OCRL01000905
279635
Bacillota
GTG
His
>WENV180640128
OCRL01000644
279635
Bacillota
GTG
His
>WENV180639765
OCRL01000122
279635
Bacillota
GTG
His
>WENV180639875
OCRL01000187
338344
Bacillota
CCT
Arg
>WENV180639707
OCRL01000079
235533
Bacillota
GTT
Asn
>WENV180639436
OCRL01000004
235533
Bacillota
GTT
Asn
>WENV180639429
OCRL01000004
235533
Bacillota
GTT
Asn
>WENV180639723
OCRL01000084
72325
Bacillota
CAA
Leu
>WENV180639755
OCRL01000113
144795
Bacillota
GTT
Asn
>WENV180639823
OCRL01000153
17822
Bacillota
TGA
Ser
>WENV180639821
OCRL01000153
17822
Bacillota
TGA
Ser
>WENV180639938
OCRL01000254
16270
Bacillota
>WENV180639658
OCRL01000057
338225
Bacillota
CCG
Arg
>WENV180640191
OCRL01000905
145383
Bacillota
TCT
Arg
>WENV180639764
OCRL01000122
145383
Bacillota
TCT
Arg
>WENV180639710
OCRL01000080
338553
Bacillota
CTC
Glu
>WENV180640195
OCRL01000905
95697
Bacillota
TAG
Leu
>WENV180640095
OCRL01000512
338545
Bacillota
>WENV180640012
OCRL01000335
338545
Bacillota
>WENV180639721
OCRL01000084
338343
Bacillota
GCC
Gly
>WENV180640182
OCRL01000882
411647
Bacillota
TCC
Gly
>WENV180639433
OCRL01000004
411647
Bacillota
TCC
Gly
>WENV180640283
OCRL01001139
235532
Bacillota
GAA
Phe
>WENV180640180
OCRL01000882
235532
Bacillota
GAA
Phe
>WENV180639700
OCRL01000074
338556
Bacillota
CCC
Gly
>WENV180639729
OCRL01000090
81208
Bacillota
CAG
Leu
>WENV180639439
OCRL01000005
80673
Bacillota
GAG
Leu
>WENV180639903
OCRL01000217
44932
Bacillota
>WENV180640299
OCRL01001359
7065
Bacillota
GCT
Ser
>WENV180639719
OCRL01000084
235528
Bacillota
GTG
His
>WENV180639824
OCRL01000153
17824
Bacillota
GCT
Ser
>WENV180639822
OCRL01000153
17824
Bacillota
GCT
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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