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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
63 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180648456
OCSJ01026992
37213
Bacillota
TGA
Ser
>WENV180648397
OCSJ01005997
235134
Bacillota
GAA
Phe
>WENV180648715
OCSJ01086360
338152
Bacillota
TTC
Glu
>WENV180648748
OCSJ01099755
250201
Bacillota
TGC
Ala
>WENV180648675
OCSJ01072993
148239
Bacillota
TCT
Arg
>WENV180648631
OCSJ01057670
44854
Bacillota
TGA
Ser
>WENV180648771
OCSJ01105836
235154
Bacillota
GTT
Asn
>WENV180648768
OCSJ01104536
144577
Bacillota
GAT
Ile
>WENV180648458
OCSJ01027688
281701
Bacillota
TGC
Ala
>WENV180648952
OCSJ01203976
361897
Bacillota
CTC
Glu
>WENV180648932
OCSJ01185425
353391
Bacillota
GCC
Gly
>WENV180649105
OCSJ01312337
144668
Bacillota
GTC
Asp
>WENV180649044
OCSJ01288222
144668
Bacillota
GTC
Asp
>WENV180648698
OCSJ01080918
429429
Bacillota
CCA
Trp
>WENV180648522
OCSJ01036768
235117
Bacillota
TAC
Val
>WENV180648494
OCSJ01032900
156937
Bacillota
GTG
His
>WENV180648944
OCSJ01193584
235079
Bacillota
GAA
Phe
>WENV180648474
OCSJ01029949
173314
Bacillota
GAT
Ile
>WENV180648414
OCSJ01010094
173314
Bacillota
GAT
Ile
>WENV180648553
OCSJ01044168
338149
Bacillota
CTC
Glu
>WENV180648600
OCSJ01052026
271471
Bacillota
GCC
Gly
>WENV180648656
OCSJ01066764
245298
Bacillota
CGG
Pro
>WENV180648883
OCSJ01163914
169968
Bacillota
CAT
Met
>WENV180648511
OCSJ01035931
169968
Bacillota
CAT
Met
>WENV180649102
OCSJ01311947
413152
Bacillota
TCC
Gly
>WENV180648644
OCSJ01061541
201704
Bacillota
GAT
Ile
>WENV180648462
OCSJ01027764
144599
Bacillota
GTC
Asp
>WENV180648676
OCSJ01072993
144610
Bacillota
GTG
His
>WENV180648398
OCSJ01005997
240017
Bacillota
GCC
Gly
>WENV180648655
OCSJ01066764
411547
Bacillota
CTG
Gln
>WENV180648632
OCSJ01057670
4624
Bacillota
GCT
Ser
>WENV180649080
OCSJ01310592
263765
Bacillota
TAC
Val
>WENV180648809
OCSJ01121401
263765
Bacillota
TAC
Val
>WENV180648395
OCSJ01005997
263765
Bacillota
TAC
Val
>WENV180649104
OCSJ01312056
154748
Bacillota
GTC
Asp
>WENV180648538
OCSJ01039007
154748
Bacillota
GTC
Asp
>WENV180648577
OCSJ01048640
419639
Bacillota
GCA
Cys
>WENV180648990
OCSJ01242311
245386
Bacillota
CCA
Trp
>WENV180648991
OCSJ01242311
154711
Bacillota
TGG
Pro
>WENV180648630
OCSJ01056859
154711
Bacillota
TGG
Pro
>WENV180648731
OCSJ01093128
147674
Bacillota
TCT
Arg
>WENV180648725
OCSJ01089233
163943
Bacillota
GTC
Asp
>WENV180649010
OCSJ01255541
241432
Bacillota
TGT
Thr
>WENV180648953
OCSJ01205160
235124
Bacillota
TGG
Pro
>WENV180648557
OCSJ01044272
144652
Bacillota
GTC
Asp
>WENV180648425
OCSJ01015858
247734
Bacillota
TGC
Ala
>WENV180648957
OCSJ01210589
144621
Bacillota
GTT
Asn
>WENV180648616
OCSJ01054754
421363
Bacillota
TCC
Gly
>WENV180648740
OCSJ01097087
243098
Bacillota
GGT
Thr
>WENV180648554
OCSJ01044168
272992
Bacillota
CTT
Lys
>WENV180648576
OCSJ01048640
344240
Bacillota
GCC
Gly
>WENV180648795
OCSJ01112850
198135
Bacillota
GAT
Ile
>WENV180648574
OCSJ01048640
196632
Bacillota
GTC
Asp
>WENV180648864
OCSJ01147392
242686
Bacillota
TGC
Ala
>WENV180649009
OCSJ01254555
299139
Bacillota
TGC
Ala
>WENV180648471
OCSJ01029786
299139
Bacillota
TGC
Ala
>WENV180648413
OCSJ01010094
299139
Bacillota
TGC
Ala
>WENV180648984
OCSJ01237835
95563
Bacillota
GTA
Tyr
>WENV180648512
OCSJ01035931
272488
Bacillota
GAA
Phe
>WENV180648880
OCSJ01160710
338128
Bacillota
TTC
Glu
>WENV180648807
OCSJ01121395
338128
Bacillota
TTC
Glu
>WENV180648419
OCSJ01012487
338128
Bacillota
TTC
Glu
>WENV180648575
OCSJ01048640
245344
Bacillota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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