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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
149 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180650998
OCSZ01052896
196621
Bacillota
GTC
Asp
>WENV180651050
OCSZ01058427
196621
Bacillota
GTC
Asp
>WENV180651255
OCSZ01097642
196621
Bacillota
GTC
Asp
>WENV180651425
OCSZ01151811
196621
Bacillota
GTC
Asp
>WENV180651452
OCSZ01161709
196621
Bacillota
GTC
Asp
>WENV180651590
OCSZ01231078
196621
Bacillota
GTC
Asp
>WENV180651728
OCSZ01302532
196621
Bacillota
GTC
Asp
>WENV180651385
OCSZ01135603
155958
Bacillota
GAT
Ile
>WENV180651208
OCSZ01086118
202812
Bacillota
CAT
Met
>WENV180651045
OCSZ01057725
309417
Bacillota
GGC
Ala
>WENV180651782
OCSZ01364285
37213
Bacillota
TGA
Ser
>WENV180650788
OCSZ01015784
144612
Bacillota
TCT
Arg
>WENV180651032
OCSZ01056415
267649
Bacillota
TAC
Val
>WENV180651065
OCSZ01059536
235134
Bacillota
GAA
Phe
>WENV180651727
OCSZ01302306
235098
Bacillota
GAC
Val
>WENV180651313
OCSZ01113910
338152
Bacillota
TTC
Glu
>WENV180651251
OCSZ01096720
338152
Bacillota
TTC
Glu
>WENV180651575
OCSZ01220690
118788
Bacillota
TAG
Leu
>WENV180651724
OCSZ01301744
235154
Bacillota
GTT
Asn
>WENV180651250
OCSZ01096720
235154
Bacillota
GTT
Asn
>WENV180650859
OCSZ01030255
144577
Bacillota
GAT
Ile
>WENV180651775
OCSZ01306526
302150
Bacillota
TAC
Val
>WENV180651353
OCSZ01124443
307003
Bacillota
TGC
Ala
>WENV180650829
OCSZ01022296
59312
Bacillota
CAG
Leu
>WENV180650932
OCSZ01045938
238910
Bacillota
CTT
Lys
>WENV180650837
OCSZ01024597
338147
Bacillota
CTC
Glu
>WENV180650793
OCSZ01016373
338147
Bacillota
CTC
Glu
>WENV180651488
OCSZ01171182
235150
Bacillota
TGC
Ala
>WENV180651660
OCSZ01269380
155273
Bacillota
CAT
Met
>WENV180651119
OCSZ01067142
340802
Bacillota
TTG
Gln
>WENV180650812
OCSZ01017342
235114
Bacillota
TTT
Lys
>WENV180651546
OCSZ01202184
341763
Bacillota
CTC
Glu
>WENV180651088
OCSZ01063247
37083
Bacillota
TGA
Ser
>WENV180651095
OCSZ01063648
429429
Bacillota
CCA
Trp
>WENV180651531
OCSZ01193300
313454
Bacillota
GAA
Phe
>WENV180651098
OCSZ01063840
313454
Bacillota
GAA
Phe
>WENV180651085
OCSZ01062671
41154
Bacillota
TAA
Leu
>WENV180651585
OCSZ01227839
44859
Bacillota
AAG
Leu
>WENV180650675
OCSZ01003424
44859
Bacillota
AAG
Leu
>WENV180651589
OCSZ01231078
235117
Bacillota
TAC
Val
>WENV180651326
OCSZ01118038
235117
Bacillota
TAC
Val
>WENV180651049
OCSZ01058427
235117
Bacillota
TAC
Val
>WENV180650997
OCSZ01052896
235117
Bacillota
TAC
Val
>WENV180651761
OCSZ01305385
156937
Bacillota
GTG
His
>WENV180651755
OCSZ01305048
338550
Bacillota
>WENV180651791
OCSZ01370973
235079
Bacillota
GAA
Phe
>WENV180651752
OCSZ01304933
235079
Bacillota
GAA
Phe
>WENV180651694
OCSZ01294571
235079
Bacillota
GAA
Phe
>WENV180651614
OCSZ01242271
235079
Bacillota
GAA
Phe
>WENV180651557
OCSZ01209068
235079
Bacillota
GAA
Phe
>WENV180651453
OCSZ01161709
235079
Bacillota
GAA
Phe
>WENV180651438
OCSZ01156458
235079
Bacillota
GAA
Phe
>WENV180651384
OCSZ01135507
235079
Bacillota
GAA
Phe
>WENV180651328
OCSZ01118038
235079
Bacillota
GAA
Phe
>WENV180651291
OCSZ01105229
235079
Bacillota
GAA
Phe
>WENV180651051
OCSZ01058427
235079
Bacillota
GAA
Phe
>WENV180650999
OCSZ01052896
235079
Bacillota
GAA
Phe
>WENV180650858
OCSZ01030255
235087
Bacillota
TGC
Ala
>WENV180651028
OCSZ01056243
338149
Bacillota
CTC
Glu
>WENV180650918
OCSZ01043332
338149
Bacillota
CTC
Glu
>WENV180650744
OCSZ01011124
338149
Bacillota
CTC
Glu
>WENV180650618
OCSZ01000124
338149
Bacillota
CTC
Glu
>WENV180651415
OCSZ01148362
144766
Bacillota
CAT
Met
>WENV180650892
OCSZ01037383
245298
Bacillota
CGG
Pro
>WENV180651068
OCSZ01059696
37269
Bacillota
TGA
Ser
>WENV180650929
OCSZ01045601
37269
Bacillota
TGA
Ser
>WENV180651466
OCSZ01163911
287000
Bacillota
GTT
Asn
>WENV180651312
OCSZ01113910
287000
Bacillota
GTT
Asn
>WENV180651735
OCSZ01303428
169968
Bacillota
CAT
Met
>WENV180651716
OCSZ01299023
169968
Bacillota
CAT
Met
>WENV180651427
OCSZ01151814
169968
Bacillota
CAT
Met
>WENV180651097
OCSZ01063840
169968
Bacillota
CAT
Met
>WENV180650863
OCSZ01030781
169968
Bacillota
CAT
Met
>WENV180651767
OCSZ01305908
413152
Bacillota
TCC
Gly
>WENV180651736
OCSZ01303431
413152
Bacillota
TCC
Gly
>WENV180651273
OCSZ01101839
413152
Bacillota
TCC
Gly
>WENV180650983
OCSZ01050721
413152
Bacillota
TCC
Gly
>WENV180651203
OCSZ01084768
201704
Bacillota
GAT
Ile
>WENV180651219
OCSZ01088335
145360
Bacillota
GTC
Asp
>WENV180651581
OCSZ01224740
100326
Bacillota
GTA
Tyr
>WENV180651789
OCSZ01370943
144610
Bacillota
GTG
His
>WENV180651598
OCSZ01235491
144610
Bacillota
GTG
His
>WENV180651118
OCSZ01067142
144610
Bacillota
GTG
His
>WENV180650810
OCSZ01017342
144610
Bacillota
GTG
His
>WENV180650891
OCSZ01037383
411547
Bacillota
CTG
Gln
>WENV180651698
OCSZ01294754
263765
Bacillota
TAC
Val
>WENV180651639
OCSZ01260966
263765
Bacillota
TAC
Val
>WENV180651329
OCSZ01118041
263765
Bacillota
TAC
Val
>WENV180651316
OCSZ01115026
263765
Bacillota
TAC
Val
>WENV180651063
OCSZ01059536
263765
Bacillota
TAC
Val
>WENV180651052
OCSZ01058430
263765
Bacillota
TAC
Val
>WENV180651015
OCSZ01055252
263765
Bacillota
TAC
Val
>WENV180650640
OCSZ01000996
235095
Bacillota
GGT
Thr
>WENV180650792
OCSZ01015873
419945
Bacillota
GCA
Cys
>WENV180651091
OCSZ01063250
312428
Bacillota
TAC
Val
>WENV180651053
OCSZ01058430
154748
Bacillota
GTC
Asp
>WENV180651644
OCSZ01261553
411549
Bacillota
TTG
Gln
>WENV180650662
OCSZ01002701
235142
Bacillota
CTT
Lys
>WENV180651258
OCSZ01097728
245386
Bacillota
CCA
Trp
>WENV180650935
OCSZ01045938
245386
Bacillota
CCA
Trp
>WENV180651601
OCSZ01235549
59296
Bacillota
AAG
Leu
>WENV180651377
OCSZ01132198
154711
Bacillota
TGG
Pro
>WENV180651240
OCSZ01091074
148188
Bacillota
CCG
Arg
>WENV180651076
OCSZ01061147
148188
Bacillota
CCG
Arg
>WENV180650827
OCSZ01021653
148188
Bacillota
CCG
Arg
>WENV180651256
OCSZ01097728
298639
Bacillota
GTT
Asn
>WENV180651643
OCSZ01261399
80612
Bacillota
GTA
Tyr
>WENV180650730
OCSZ01009245
256380
Bacillota
>WENV180651129
OCSZ01069695
147674
Bacillota
TCT
Arg
>WENV180651477
OCSZ01166079
163943
Bacillota
GTC
Asp
>WENV180651506
OCSZ01179554
235124
Bacillota
TGG
Pro
>WENV180651762
OCSZ01305451
163753
Bacillota
TGG
Pro
>WENV180651742
OCSZ01304037
163753
Bacillota
TGG
Pro
>WENV180651541
OCSZ01199202
201667
Bacillota
TCT
Arg
>WENV180650644
OCSZ01001365
338129
Bacillota
TGT
Thr
>WENV180650946
OCSZ01046313
436750
Bacillota
TCC
Gly
>WENV180651542
OCSZ01199202
279635
Bacillota
GTG
His
>WENV180651513
OCSZ01182913
319167
Bacillota
CAT
Met
>WENV180651613
OCSZ01242271
157838
Bacillota
GTC
Asp
>WENV180650639
OCSZ01000827
144583
Bacillota
ACG
Arg
>WENV180651229
OCSZ01089126
310822
Bacillota
CTT
Lys
>WENV180651561
OCSZ01210937
144652
Bacillota
GTC
Asp
>WENV180651523
OCSZ01190044
144652
Bacillota
GTC
Asp
>WENV180651287
OCSZ01104260
144652
Bacillota
GTC
Asp
>WENV180651070
OCSZ01059876
144652
Bacillota
GTC
Asp
>WENV180650962
OCSZ01048792
144652
Bacillota
GTC
Asp
>WENV180650679
OCSZ01003859
247734
Bacillota
TGC
Ala
>WENV180650619
OCSZ01000124
144621
Bacillota
GTT
Asn
>WENV180651142
OCSZ01074120
235113
Bacillota
GAA
Phe
>WENV180651160
OCSZ01077151
199895
Bacillota
GTC
Asp
>WENV180651188
OCSZ01081432
58712
Bacillota
CAG
Leu
>WENV180650871
OCSZ01034147
58712
Bacillota
CAG
Leu
>WENV180650649
OCSZ01001922
58712
Bacillota
CAG
Leu
>WENV180651583
OCSZ01226775
144762
Bacillota
TCT
Arg
>WENV180650853
OCSZ01027625
245296
Bacillota
CCC
Gly
>WENV180651499
OCSZ01177881
272992
Bacillota
CTT
Lys
>WENV180651029
OCSZ01056243
272992
Bacillota
CTT
Lys
>WENV180650919
OCSZ01043332
272992
Bacillota
CTT
Lys
>WENV180650745
OCSZ01011124
272992
Bacillota
CTT
Lys
>WENV180650791
OCSZ01015873
344240
Bacillota
GCC
Gly
>WENV180651311
OCSZ01112705
196632
Bacillota
GTC
Asp
>WENV180651459
OCSZ01162745
299139
Bacillota
TGC
Ala
>WENV180650741
OCSZ01010497
144594
Bacillota
CAC
Val
>WENV180651140
OCSZ01074120
95563
Bacillota
GTA
Tyr
>WENV180651216
OCSZ01088324
157105
Bacillota
GAT
Ile
>WENV180651004
OCSZ01052904
338207
Bacillota
TTC
Glu
>WENV180651740
OCSZ01303944
338128
Bacillota
TTC
Glu
>WENV180651398
OCSZ01141826
338128
Bacillota
TTC
Glu
>WENV180651717
OCSZ01299520
245344
Bacillota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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