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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
64 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180782163
ODIP01028404
141635
Bacteroidota
TAC
Val
>WENV180782165
ODIP01028404
339412
Bacteroidota
GGT
Thr
>WENV180782089
ODIP01019358
147942
Bacteroidota
GTC
Asp
>WENV180781953
ODIP01009720
306609
Bacteroidota
GAA
Phe
>WENV180782220
ODIP01038923
97610
Bacteroidota
GTA
Tyr
>WENV180781738
ODIP01002804
246808
Bacteroidota
CTT
Lys
>WENV180782098
ODIP01020223
119907
Bacteroidota
CAA
Leu
>WENV180782222
ODIP01038923
345063
Bacteroidota
GGT
Thr
>WENV180781833
ODIP01005234
258903
Bacteroidota
>WENV180782270
ODIP01050617
394247
Bacteroidota
CTC
Glu
>WENV180781637
ODIP01001517
344824
Bacteroidota
CCG
Arg
>WENV180781510
ODIP01000414
340029
Bacteroidota
TTC
Glu
>WENV180782205
ODIP01036977
413663
Bacteroidota
CTG
Gln
>WENV180782144
ODIP01025777
237797
Bacteroidota
CCA
Trp
>WENV180781756
ODIP01003163
128178
Bacteroidota
TAC
Val
>WENV180781899
ODIP01007306
413952
Bacteroidota
>WENV180782086
ODIP01019047
238811
Bacteroidota
CAT
Met
>WENV180782184
ODIP01031273
412479
Bacteroidota
TTG
Gln
>WENV180782196
ODIP01033875
246224
Bacteroidota
GGG
Pro
>WENV180782083
ODIP01018960
155123
Bacteroidota
GTT
Asn
>WENV180782041
ODIP01015150
268513
Bacteroidota
TCC
Gly
>WENV180781750
ODIP01003055
17035
Bacteroidota
GGA
Ser
>WENV180781739
ODIP01002804
320713
Bacteroidota
TTT
Lys
>WENV180781601
ODIP01001137
176247
Bacteroidota
TCT
Arg
>WENV180781472
ODIP01000208
412439
Bacteroidota
CCA
Trp
>WENV180782049
ODIP01015725
238671
Bacteroidota
TTT
Lys
>WENV180782139
ODIP01025344
37076
Bacteroidota
TAA
Leu
>WENV180782141
ODIP01025597
191087
Bacteroidota
TCT
Arg
>WENV180781960
ODIP01009897
155147
Bacteroidota
GGC
Ala
>WENV180781620
ODIP01001306
147939
Bacteroidota
CAT
Met
>WENV180782252
ODIP01046504
37794
Bacteroidota
TAA
Leu
>WENV180782211
ODIP01037590
60822
Bacteroidota
GAG
Leu
>WENV180781740
ODIP01002804
60822
Bacteroidota
GAG
Leu
>WENV180781776
ODIP01003559
414526
Bacteroidota
GCA
Cys
>WENV180781630
ODIP01001370
130479
Bacteroidota
TAC
Val
>WENV180781688
ODIP01001992
81773
Bacteroidota
CAG
Leu
>WENV180782073
ODIP01018043
16898
Bacteroidota
GGA
Ser
>WENV180781652
ODIP01001630
148247
Bacteroidota
TGC
Ala
>WENV180782199
ODIP01034521
290994
Bacteroidota
CAT
Met
>WENV180782012
ODIP01012847
235802
Bacteroidota
CAT
Met
>WENV180781911
ODIP01007863
144639
Bacteroidota
GGC
Ala
>WENV180781808
ODIP01004455
151121
Bacteroidota
CAT
Met
>WENV180781719
ODIP01002463
240012
Bacteroidota
CCC
Gly
>WENV180781464
ODIP01000153
251411
Bacteroidota
GAA
Phe
>WENV180782360
ODIP01118276
369111
Bacteroidota
TTC
Glu
>WENV180782137
ODIP01025258
95954
Bacteroidota
TAG
Leu
>WENV180781829
ODIP01005074
127951
Bacteroidota
TAC
Val
>WENV180782164
ODIP01028404
95986
Bacteroidota
GTA
Tyr
>WENV180781767
ODIP01003343
147945
Bacteroidota
CAT
Met
>WENV180781487
ODIP01000253
147945
Bacteroidota
CAT
Met
>WENV180782094
ODIP01019886
159335
Bacteroidota
GTT
Asn
>WENV180781619
ODIP01001288
185921
Bacteroidota
GTC
Asp
>WENV180782206
ODIP01037268
59413
Bacteroidota
GCT
Ser
>WENV180781631
ODIP01001370
133943
Bacteroidota
TAC
Val
>WENV180781600
ODIP01001137
128249
Bacteroidota
TGG
Pro
>WENV180782004
ODIP01012523
96124
Bacteroidota
TAG
Leu
>WENV180782327
ODIP01085733
59498
Bacteroidota
GAG
Leu
>WENV180781804
ODIP01004281
414472
Bacteroidota
TTG
Gln
>WENV180781809
ODIP01004461
154850
Bacteroidota
CAT
Met
>WENV180782108
ODIP01020760
302002
Bacteroidota
CGT
Thr
>WENV180781885
ODIP01007025
110457
Bacteroidota
TAG
Leu
>WENV180782068
ODIP01017511
235129
Bacteroidota
GCC
Gly
>WENV180781676
ODIP01001878
345164
Bacteroidota
CCT
Arg
>WENV180781744
ODIP01002918
155341
Bacteroidota
GTG
His
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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