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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
119 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181111855
OEEL01000013
243647
Bacillota
TTT
Lys
>WENV181113314
OEEL01019635
243647
Bacillota
TTT
Lys
>WENV181111956
OEEL01000049
339630
Bacillota
GCC
Gly
>WENV181112729
OEEL01002626
339630
Bacillota
GCC
Gly
>WENV181112520
OEEL01001135
16842
Bacillota
CGA
Ser
>WENV181112943
OEEL01006655
16842
Bacillota
CGA
Ser
>WENV181113378
OEEL01023699
37213
Bacillota
TGA
Ser
>WENV181113780
OEEL01108393
342730
Bacillota
CTC
Glu
>WENV181112594
OEEL01001560
235693
Bacillota
GGT
Thr
>WENV181113187
OEEL01014383
235693
Bacillota
GGT
Thr
>WENV181113517
OEEL01034959
246392
Bacillota
GTT
Asn
>WENV181113474
OEEL01030802
246392
Bacillota
GTT
Asn
>WENV181113296
OEEL01019072
246392
Bacillota
GTT
Asn
>WENV181112436
OEEL01000753
246392
Bacillota
GTT
Asn
>WENV181113754
OEEL01096810
155040
Bacillota
GAT
Ile
>WENV181113675
OEEL01064318
338152
Bacillota
TTC
Glu
>WENV181113100
OEEL01011600
340263
Bacillota
TTC
Glu
>WENV181111895
OEEL01000022
37549
Bacillota
TAA
Leu
>WENV181113338
OEEL01020453
148348
Bacillota
GTC
Asp
>WENV181113101
OEEL01011600
148348
Bacillota
GTC
Asp
>WENV181113333
OEEL01020453
243099
Bacillota
GTT
Asn
>WENV181113131
OEEL01012481
243099
Bacillota
GTT
Asn
>WENV181113369
OEEL01022380
147691
Bacillota
GAT
Ile
>WENV181113576
OEEL01043936
411591
Bacillota
GGT
Thr
>WENV181113180
OEEL01014164
239080
Bacillota
CTG
Gln
>WENV181111897
OEEL01000022
243119
Bacillota
CTT
Lys
>WENV181113356
OEEL01021320
235150
Bacillota
TGC
Ala
>WENV181113118
OEEL01012023
235150
Bacillota
TGC
Ala
>WENV181112343
OEEL01000473
152047
Bacillota
GGG
Pro
>WENV181113644
OEEL01055604
235137
Bacillota
TGC
Ala
>WENV181113588
OEEL01046091
235137
Bacillota
TGC
Ala
>WENV181113337
OEEL01020453
241761
Bacillota
TAC
Val
>WENV181113300
OEEL01019072
241761
Bacillota
TAC
Val
>WENV181112438
OEEL01000753
241761
Bacillota
TAC
Val
>WENV181112462
OEEL01000877
16834
Bacillota
GCT
Ser
>WENV181112070
OEEL01000130
16834
Bacillota
GCT
Ser
>WENV181113739
OEEL01086665
239076
Bacillota
GAA
Phe
>WENV181113339
OEEL01020453
239076
Bacillota
GAA
Phe
>WENV181113824
OEEL01142203
243646
Bacillota
GTT
Asn
>WENV181112788
OEEL01003144
243646
Bacillota
GTT
Asn
>WENV181111854
OEEL01000013
243646
Bacillota
GTT
Asn
>WENV181112368
OEEL01000556
114002
Bacillota
CAA
Leu
>WENV181112159
OEEL01000198
114002
Bacillota
CAA
Leu
>WENV181112148
OEEL01000189
342736
Bacillota
TTG
Gln
>WENV181112135
OEEL01000178
37437
Bacillota
TAA
Leu
>WENV181112121
OEEL01000165
37437
Bacillota
TAA
Leu
>WENV181113535
OEEL01038382
340265
Bacillota
GCC
Gly
>WENV181113516
OEEL01034959
340265
Bacillota
GCC
Gly
>WENV181113473
OEEL01030802
340265
Bacillota
GCC
Gly
>WENV181113295
OEEL01019072
340265
Bacillota
GCC
Gly
>WENV181113229
OEEL01016054
340265
Bacillota
GCC
Gly
>WENV181111893
OEEL01000022
340265
Bacillota
GCC
Gly
>WENV181112985
OEEL01007812
113951
Bacillota
GTA
Tyr
>WENV181112703
OEEL01002426
238853
Bacillota
TAC
Val
>WENV181112790
OEEL01003144
243612
Bacillota
TAC
Val
>WENV181111857
OEEL01000013
243612
Bacillota
TAC
Val
>WENV181113343
OEEL01020453
81382
Bacillota
GAG
Leu
>WENV181113447
OEEL01027009
155089
Bacillota
CAT
Met
>WENV181112486
OEEL01000975
155089
Bacillota
CAT
Met
>WENV181112528
OEEL01001198
37551
Bacillota
CGA
Ser
>WENV181112836
OEEL01003900
341796
Bacillota
CCG
Arg
>WENV181113620
OEEL01050543
81373
Bacillota
GTA
Tyr
>WENV181113191
OEEL01014471
81373
Bacillota
GTA
Tyr
>WENV181112262
OEEL01000314
147135
Bacillota
ACG
Arg
>WENV181113821
OEEL01140021
144599
Bacillota
GTC
Asp
>WENV181112862
OEEL01004372
148268
Bacillota
CGG
Pro
>WENV181111981
OEEL01000061
342895
Bacillota
CAT
Met
>WENV181112709
OEEL01002452
10680
Bacillota
GGA
Ser
>WENV181112860
OEEL01004372
243399
Bacillota
CCA
Trp
>WENV181113662
OEEL01060248
241471
Bacillota
TGC
Ala
>WENV181113547
OEEL01039462
241471
Bacillota
TGC
Ala
>WENV181113508
OEEL01034227
241471
Bacillota
TGC
Ala
>WENV181113114
OEEL01011967
241471
Bacillota
TGC
Ala
>WENV181113554
OEEL01040889
148057
Bacillota
CAT
Met
>WENV181112799
OEEL01003287
96694
Bacillota
TAG
Leu
>WENV181113761
OEEL01099662
144962
Bacillota
CAT
Met
>WENV181112595
OEEL01001560
152045
Bacillota
CAT
Met
>WENV181112974
OEEL01007637
235701
Bacillota
TTT
Lys
>WENV181112738
OEEL01002626
154711
Bacillota
TGG
Pro
>WENV181112737
OEEL01002626
154711
Bacillota
TGG
Pro
>WENV181111964
OEEL01000049
154711
Bacillota
TGG
Pro
>WENV181113115
OEEL01011967
152019
Bacillota
GAT
Ile
>WENV181112134
OEEL01000176
152046
Bacillota
TCT
Arg
>WENV181113738
OEEL01085678
237846
Bacillota
GCC
Gly
>WENV181113632
OEEL01053070
237846
Bacillota
GCC
Gly
>WENV181113255
OEEL01017186
237846
Bacillota
GCC
Gly
>WENV181113826
OEEL01143092
235197
Bacillota
GTC
Asp
>WENV181112815
OEEL01003517
235197
Bacillota
GTC
Asp
>WENV181112755
OEEL01002817
235197
Bacillota
GTC
Asp
>WENV181112117
OEEL01000165
235197
Bacillota
GTC
Asp
>WENV181112099
OEEL01000145
342061
Bacillota
GCA
Cys
>WENV181112861
OEEL01004372
152051
Bacillota
ACG
Arg
>WENV181113515
OEEL01034783
241526
Bacillota
CTT
Lys
>WENV181113336
OEEL01020453
241526
Bacillota
CTT
Lys
>WENV181112981
OEEL01007812
147183
Bacillota
GTT
Asn
>WENV181113312
OEEL01019635
243613
Bacillota
GTG
His
>WENV181112972
OEEL01007637
243613
Bacillota
GTG
His
>WENV181113091
OEEL01011216
144672
Bacillota
TCT
Arg
>WENV181113102
OEEL01011614
127572
Bacillota
ACG
Arg
>WENV181113449
OEEL01027430
148495
Bacillota
TCT
Arg
>WENV181112954
OEEL01006879
148495
Bacillota
TCT
Arg
>WENV181113762
OEEL01099662
235292
Bacillota
CCA
Trp
>WENV181113188
OEEL01014383
152491
Bacillota
CAT
Met
>WENV181113032
OEEL01009374
241638
Bacillota
GTG
His
>WENV181113601
OEEL01047674
237681
Bacillota
GTC
Asp
>WENV181113270
OEEL01017661
237681
Bacillota
GTC
Asp
>WENV181112941
OEEL01006641
413657
Bacillota
CCC
Gly
>WENV181113456
OEEL01028555
152018
Bacillota
CCT
Arg
>WENV181113801
OEEL01123690
238945
Bacillota
GCC
Gly
>WENV181113731
OEEL01079202
238945
Bacillota
GCC
Gly
>WENV181113498
OEEL01032927
238945
Bacillota
GCC
Gly
>WENV181112780
OEEL01003088
238945
Bacillota
GCC
Gly
>WENV181112772
OEEL01003018
238945
Bacillota
GCC
Gly
>WENV181112331
OEEL01000415
238945
Bacillota
GCC
Gly
>WENV181112736
OEEL01002626
238857
Bacillota
CCA
Trp
>WENV181113225
OEEL01015869
413179
Bacillota
CCC
Gly
>WENV181113313
OEEL01019635
343027
Bacillota
TTG
Gln
>WENV181112973
OEEL01007637
343027
Bacillota
TTG
Gln
>WENV181112458
OEEL01000853
151836
Bacillota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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