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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
55 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181226016
OFDJ01008901
243647
Bacillota
TTT
Lys
>WENV181225973
OFDJ01003749
235507
Bacillota
GAA
Phe
>WENV181225985
OFDJ01003967
361659
Bacillota
GCC
Gly
>WENV181225808
OFDJ01000450
37110
Bacillota
TAA
Leu
>WENV181225907
OFDJ01001554
16842
Bacillota
CGA
Ser
>WENV181225905
OFDJ01001551
37213
Bacillota
TGA
Ser
>WENV181225773
OFDJ01000184
144612
Bacillota
TCT
Arg
>WENV181225959
OFDJ01003264
18465
Bacillota
GCT
Ser
>WENV181225911
OFDJ01001588
16815
Bacillota
TGA
Ser
>WENV181225910
OFDJ01001588
16815
Bacillota
TGA
Ser
>WENV181225980
OFDJ01003965
237285
Bacillota
TGT
Thr
>WENV181225991
OFDJ01004259
95737
Bacillota
GTA
Tyr
>WENV181225984
OFDJ01003967
114359
Bacillota
TAG
Leu
>WENV181225926
OFDJ01001897
114359
Bacillota
TAG
Leu
>WENV181225942
OFDJ01002582
391536
Bacillota
TTC
Glu
>WENV181225978
OFDJ01003837
302152
Bacillota
CTT
Lys
>WENV181225915
OFDJ01001616
186380
Bacillota
GTC
Asp
>WENV181225687
OFDJ01000024
235117
Bacillota
TAC
Val
>WENV181225948
OFDJ01002874
338550
Bacillota
>WENV181225689
OFDJ01000024
235079
Bacillota
GAA
Phe
>WENV181225943
OFDJ01002582
243612
Bacillota
TAC
Val
>WENV181225690
OFDJ01000024
271471
Bacillota
GCC
Gly
>WENV181225686
OFDJ01000024
271471
Bacillota
GCC
Gly
>WENV181225957
OFDJ01003033
258936
Bacillota
GGT
Thr
>WENV181225950
OFDJ01002885
344320
Bacillota
GTT
Asn
>WENV181225965
OFDJ01003389
339364
Bacillota
TTG
Gln
>WENV181225993
OFDJ01004298
59705
Bacillota
CAG
Leu
>WENV181225914
OFDJ01001616
312468
Bacillota
TAC
Val
>WENV181226010
OFDJ01008026
339362
Bacillota
GTT
Asn
>WENV181225951
OFDJ01002895
194150
Bacillota
TGG
Pro
>WENV181225932
OFDJ01002086
198159
Bacillota
CAT
Met
>WENV181225856
OFDJ01000968
235127
Bacillota
TTT
Lys
>WENV181225945
OFDJ01002816
235197
Bacillota
GTC
Asp
>WENV181225940
OFDJ01002582
368876
Bacillota
GCC
Gly
>WENV181225853
OFDJ01000968
147674
Bacillota
TCT
Arg
>WENV181225981
OFDJ01003967
235905
Bacillota
GTG
His
>WENV181225986
OFDJ01003967
411739
Bacillota
TCC
Gly
>WENV181225964
OFDJ01003389
237287
Bacillota
GTG
His
>WENV181225967
OFDJ01003413
235638
Bacillota
GAA
Phe
>WENV181225933
OFDJ01002086
235506
Bacillota
TGC
Ala
>WENV181225983
OFDJ01003967
237963
Bacillota
TTT
Lys
>WENV181226014
OFDJ01008901
243613
Bacillota
GTG
His
>WENV181225999
OFDJ01004772
23575
Bacillota
GGA
Ser
>WENV181226002
OFDJ01005144
429578
Bacillota
GCA
Cys
>WENV181225963
OFDJ01003389
145469
Bacillota
TCT
Arg
>WENV181226019
OFDJ01009981
152491
Bacillota
CAT
Met
>WENV181225996
OFDJ01004341
273029
Bacillota
TGT
Thr
>WENV181226018
OFDJ01009981
281472
Bacillota
GGT
Thr
>WENV181225958
OFDJ01003264
16361
Bacillota
TGA
Ser
>WENV181225913
OFDJ01001616
338545
Bacillota
>WENV181225786
OFDJ01000280
420471
Bacillota
TCC
Gly
>WENV181225941
OFDJ01002582
287034
Bacillota
GTT
Asn
>WENV181225974
OFDJ01003749
376360
Bacillota
GCA
Cys
>WENV181226015
OFDJ01008901
343027
Bacillota
TTG
Gln
>WENV181225966
OFDJ01003389
237283
Bacillota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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