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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
110 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183728807
PJTQ01000464
412419
Bacteroidota
CCA
Trp
>WENV183728487
PJTQ01000078
147867
Bacteroidota
GTG
His
>WENV183728836
PJTQ01000662
147867
Bacteroidota
GTG
His
>WENV183729611
PJTQ01090207
147867
Bacteroidota
GTG
His
>WENV183728620
PJTQ01000194
145315
Bacteroidota
CAT
Met
>WENV183728677
PJTQ01000278
147864
Bacteroidota
TGG
Pro
>WENV183728706
PJTQ01000300
147864
Bacteroidota
TGG
Pro
>WENV183728707
PJTQ01000300
147864
Bacteroidota
TGG
Pro
>WENV183728708
PJTQ01000300
147864
Bacteroidota
TGG
Pro
>WENV183728782
PJTQ01000436
147864
Bacteroidota
TGG
Pro
>WENV183728894
PJTQ01001047
147864
Bacteroidota
TGG
Pro
>WENV183728486
PJTQ01000078
45276
Bacteroidota
TGA
Ser
>WENV183728531
PJTQ01000114
45276
Bacteroidota
TGA
Ser
>WENV183728572
PJTQ01000146
45276
Bacteroidota
TGA
Ser
>WENV183728592
PJTQ01000162
45276
Bacteroidota
TGA
Ser
>WENV183728656
PJTQ01000240
45276
Bacteroidota
TGA
Ser
>WENV183729088
PJTQ01004378
45276
Bacteroidota
TGA
Ser
>WENV183729089
PJTQ01004378
45276
Bacteroidota
TGA
Ser
>WENV183729410
PJTQ01035889
45276
Bacteroidota
TGA
Ser
>WENV183728837
PJTQ01000662
119517
Bacteroidota
CAA
Leu
>WENV183728935
PJTQ01001215
119517
Bacteroidota
CAA
Leu
>WENV183729462
PJTQ01043147
119517
Bacteroidota
CAA
Leu
>WENV183729115
PJTQ01005098
348279
Bacteroidota
CAT
Met
>WENV183728654
PJTQ01000240
51937
Bacteroidota
TAA
Leu
>WENV183728525
PJTQ01000109
51937
Bacteroidota
TAA
Leu
>WENV183729053
PJTQ01003346
256428
Bacteroidota
GAA
Phe
>WENV183728931
PJTQ01001127
256428
Bacteroidota
GAA
Phe
>WENV183728456
PJTQ01000059
256428
Bacteroidota
GAA
Phe
>WENV183728409
PJTQ01000044
173775
Bacteroidota
GTG
His
>WENV183728731
PJTQ01000333
235817
Bacteroidota
GAA
Phe
>WENV183728494
PJTQ01000086
235817
Bacteroidota
GAA
Phe
>WENV183728493
PJTQ01000086
235817
Bacteroidota
GAA
Phe
>WENV183728628
PJTQ01000199
59351
Bacteroidota
GAG
Leu
>WENV183729596
PJTQ01085018
415980
Bacteroidota
TTG
Gln
>WENV183729257
PJTQ01015945
415980
Bacteroidota
TTG
Gln
>WENV183729256
PJTQ01015945
415980
Bacteroidota
TTG
Gln
>WENV183728675
PJTQ01000273
25279
Bacteroidota
GGA
Ser
>WENV183728904
PJTQ01001061
413660
Bacteroidota
TTG
Gln
>WENV183728411
PJTQ01000044
267483
Bacteroidota
TGT
Thr
>WENV183728386
PJTQ01000038
267483
Bacteroidota
TGT
Thr
>WENV183729062
PJTQ01003662
113741
Bacteroidota
GTA
Tyr
>WENV183729112
PJTQ01005035
338625
Bacteroidota
TTC
Glu
>WENV183728663
PJTQ01000257
145504
Bacteroidota
TGT
Thr
>WENV183728805
PJTQ01000464
267805
Bacteroidota
TCC
Gly
>WENV183728388
PJTQ01000038
267805
Bacteroidota
TCC
Gly
>WENV183728664
PJTQ01000257
95728
Bacteroidota
GTA
Tyr
>WENV183729632
PJTQ01094814
151405
Bacteroidota
TGC
Ala
>WENV183729631
PJTQ01094687
151405
Bacteroidota
TGC
Ala
>WENV183729445
PJTQ01040400
151405
Bacteroidota
TGC
Ala
>WENV183729438
PJTQ01039021
151405
Bacteroidota
TGC
Ala
>WENV183729303
PJTQ01020242
146800
Bacteroidota
>WENV183728729
PJTQ01000328
146800
Bacteroidota
>WENV183729609
PJTQ01089656
239858
Bacteroidota
TTT
Lys
>WENV183729301
PJTQ01019922
239858
Bacteroidota
TTT
Lys
>WENV183729150
PJTQ01007041
239858
Bacteroidota
TTT
Lys
>WENV183729415
PJTQ01036999
412439
Bacteroidota
CCA
Trp
>WENV183729099
PJTQ01004702
412439
Bacteroidota
CCA
Trp
>WENV183729111
PJTQ01005035
347983
Bacteroidota
TTC
Glu
>WENV183728881
PJTQ01000904
285949
Bacteroidota
GCC
Gly
>WENV183729463
PJTQ01043172
428524
Bacteroidota
GCA
Cys
>WENV183729383
PJTQ01031227
159029
Bacteroidota
GTG
His
>WENV183729159
PJTQ01007529
412189
Bacteroidota
CCA
Trp
>WENV183728781
PJTQ01000430
127215
Bacteroidota
TAC
Val
>WENV183728779
PJTQ01000430
127215
Bacteroidota
TAC
Val
>WENV183728624
PJTQ01000197
127215
Bacteroidota
TAC
Val
>WENV183728556
PJTQ01000134
95684
Bacteroidota
TAG
Leu
>WENV183729630
PJTQ01094659
238600
Bacteroidota
CAT
Met
>WENV183729629
PJTQ01094659
238600
Bacteroidota
CAT
Met
>WENV183728833
PJTQ01000658
238600
Bacteroidota
CAT
Met
>WENV183728832
PJTQ01000658
238600
Bacteroidota
CAT
Met
>WENV183728674
PJTQ01000272
238600
Bacteroidota
CAT
Met
>WENV183728806
PJTQ01000464
342824
Bacteroidota
GGT
Thr
>WENV183728389
PJTQ01000038
342824
Bacteroidota
GGT
Thr
>WENV183728626
PJTQ01000199
199370
Bacteroidota
GTT
Asn
>WENV183728261
PJTQ01000006
46876
Bacteroidota
TGA
Ser
>WENV183728780
PJTQ01000430
126680
Bacteroidota
TAC
Val
>WENV183728727
PJTQ01000322
166688
Bacteroidota
GTC
Asp
>WENV183728726
PJTQ01000322
166688
Bacteroidota
GTC
Asp
>WENV183728893
PJTQ01001047
411719
Bacteroidota
GCA
Cys
>WENV183729604
PJTQ01087849
148318
Bacteroidota
GTT
Asn
>WENV183729166
PJTQ01008004
148318
Bacteroidota
GTT
Asn
>WENV183728760
PJTQ01000411
148318
Bacteroidota
GTT
Asn
>WENV183729245
PJTQ01014735
160686
Bacteroidota
CAT
Met
>WENV183729220
PJTQ01012257
25256
Bacteroidota
GCT
Ser
>WENV183728414
PJTQ01000044
25256
Bacteroidota
GCT
Ser
>WENV183729527
PJTQ01060107
235822
Bacteroidota
TGT
Thr
>WENV183728803
PJTQ01000464
235822
Bacteroidota
TGT
Thr
>WENV183728500
PJTQ01000088
235822
Bacteroidota
TGT
Thr
>WENV183728499
PJTQ01000088
235822
Bacteroidota
TGT
Thr
>WENV183728498
PJTQ01000088
235822
Bacteroidota
TGT
Thr
>WENV183728874
PJTQ01000822
48896
Bacteroidota
>WENV183728844
PJTQ01000677
193627
Bacteroidota
TCT
Arg
>WENV183728644
PJTQ01000226
147863
Bacteroidota
CAT
Met
>WENV183728643
PJTQ01000226
147863
Bacteroidota
CAT
Met
>WENV183729161
PJTQ01007550
150454
Bacteroidota
TGT
Thr
>WENV183729160
PJTQ01007550
150454
Bacteroidota
TGT
Thr
>WENV183729061
PJTQ01003662
150454
Bacteroidota
TGT
Thr
>WENV183729071
PJTQ01003932
258525
Bacteroidota
TGT
Thr
>WENV183728739
PJTQ01000345
145508
Bacteroidota
GTC
Asp
>WENV183729392
PJTQ01034090
185921
Bacteroidota
GTC
Asp
>WENV183728907
PJTQ01001087
185921
Bacteroidota
GTC
Asp
>WENV183728790
PJTQ01000446
159417
Bacteroidota
CAT
Met
>WENV183728843
PJTQ01000677
128249
Bacteroidota
TGG
Pro
>WENV183729528
PJTQ01060107
237427
Bacteroidota
TGT
Thr
>WENV183729044
PJTQ01003169
145151
Bacteroidota
TGG
Pro
>WENV183729063
PJTQ01003662
360629
Bacteroidota
GGT
Thr
>WENV183728669
PJTQ01000262
179613
Bacteroidota
CAT
Met
>WENV183728594
PJTQ01000166
256304
Bacteroidota
TTT
Lys
>WENV183728593
PJTQ01000166
256304
Bacteroidota
TTT
Lys
>WENV183729610
PJTQ01089656
83316
Bacteroidota
GAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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