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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
20 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170784073
MCHG01000005
288840
Alphaproteobacteria
TGG
Pro
>WENV170784090
MCHG01000011
454429
Alphaproteobacteria
CTT
Lys
>WENV170784067
MCHG01000005
282974
Alphaproteobacteria
GTG
His
>WENV170784159
MCHG01000054
454434
Alphaproteobacteria
GGC
Ala
>WENV170784160
MCHG01000054
454434
Alphaproteobacteria
GGC
Ala
>WENV170784061
MCHG01000005
654913
Alphaproteobacteria
GTT
Asn
>WENV170784219
MCHG01000147
780104
Alphaproteobacteria
TTG
Gln
>WENV170784063
MCHG01000005
671377
Alphaproteobacteria
GGT
Thr
>WENV170784074
MCHG01000005
19958
Alphaproteobacteria
GCT
Ser
>WENV170784102
MCHG01000016
297864
Alphaproteobacteria
GTC
Asp
>WENV170784104
MCHG01000016
297864
Alphaproteobacteria
GTC
Asp
>WENV170784231
MCHG01000179
297864
Alphaproteobacteria
GTC
Asp
>WENV170784151
MCHG01000044
660487
Alphaproteobacteria
GCC
Gly
>WENV170784062
MCHG01000005
482436
Alphaproteobacteria
TGT
Thr
>WENV170784150
MCHG01000044
273364
Alphaproteobacteria
CAT
Met
>WENV170784286
MCHG01000437
48680
Alphaproteobacteria
GGA
Ser
>WENV170784075
MCHG01000005
289689
Alphaproteobacteria
TAC
Val
>WENV170784125
MCHG01000022
464601
Alphaproteobacteria
CGT
Thr
>WENV170784131
MCHG01000030
654918
Alphaproteobacteria
CAC
Val
>WENV170784069
MCHG01000005
784639
Alphaproteobacteria
TCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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