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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
31 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170652579
JRYH01007115
253279
Betaproteobacteria
GTG
His
>WENV170652705
JRYH01016886
96057
Betaproteobacteria
GAG
Leu
>WENV170652578
JRYH01007115
147509
Betaproteobacteria
TCT
Arg
>WENV170652692
JRYH01015665
147509
Betaproteobacteria
TCT
Arg
>WENV170652575
JRYH01007079
155690
Betaproteobacteria
TCT
Arg
>WENV170652683
JRYH01014512
155690
Betaproteobacteria
TCT
Arg
>WENV170652543
JRYH01005587
339413
Betaproteobacteria
GGT
Thr
>WENV170652548
JRYH01005615
339413
Betaproteobacteria
GGT
Thr
>WENV170652596
JRYH01007799
400411
Betaproteobacteria
GGT
Thr
>WENV170652542
JRYH01005587
251462
Betaproteobacteria
GCC
Gly
>WENV170652610
JRYH01008942
251462
Betaproteobacteria
GCC
Gly
>WENV170652452
JRYH01003700
238204
Betaproteobacteria
TGC
Ala
>WENV170652454
JRYH01003702
238204
Betaproteobacteria
TGC
Ala
>WENV170652661
JRYH01012035
98424
Betaproteobacteria
CAA
Leu
>WENV170652889
JRYH01078230
266855
Betaproteobacteria
CAT
Met
>WENV170652558
JRYH01006084
162407
Betaproteobacteria
ACG
Arg
>WENV170652562
JRYH01006255
162407
Betaproteobacteria
ACG
Arg
>WENV170652668
JRYH01012892
162407
Betaproteobacteria
ACG
Arg
>WENV170652598
JRYH01007989
147506
Betaproteobacteria
CAT
Met
>WENV170652428
JRYH01003041
147666
Betaproteobacteria
CAT
Met
>WENV170652662
JRYH01012357
147666
Betaproteobacteria
CAT
Met
>WENV170652432
JRYH01003159
238203
Betaproteobacteria
TGT
Thr
>WENV170652901
JRYH01088295
193916
Betaproteobacteria
TTG
Gln
>WENV170652592
JRYH01007676
253278
Betaproteobacteria
TTT
Lys
>WENV170652707
JRYH01017142
253278
Betaproteobacteria
TTT
Lys
>WENV170652657
JRYH01011950
4681
Betaproteobacteria
GCT
Ser
>WENV170652803
JRYH01032631
72012
Betaproteobacteria
CAG
Leu
>WENV170652583
JRYH01007190
160841
Betaproteobacteria
TTG
Gln
>WENV170652678
JRYH01013767
160841
Betaproteobacteria
TTG
Gln
>WENV170652737
JRYH01020552
238206
Betaproteobacteria
CTT
Lys
>WENV170652826
JRYH01038928
105933
Betaproteobacteria
GAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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