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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
24 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>SRA1001817
SRR001308.69686
256971
Alphaproteobacteria
TGT
Thr
>SRA1001876
SRR001308.105433
411642
Alphaproteobacteria
GCA
Cys
>SRA1002242
SRR001308.325037
242540
Alphaproteobacteria
TGC
Ala
>SRA1002323
SRR001308.374360
242540
Alphaproteobacteria
TGC
Ala
>SRA1002133
SRR001308.264604
338268
Alphaproteobacteria
GAC
Val
>SRA1001726
SRR001308.17373
241021
Alphaproteobacteria
GGC
Ala
>SRA1001986
SRR001308.167363
95928
Alphaproteobacteria
TAG
Leu
>SRA1001738
SRR001308.22212
151730
Alphaproteobacteria
CCG
Arg
>SRA1001941
SRR001308.142472
419488
Alphaproteobacteria
TCC
Gly
>SRA1001771
SRR001308.45593
413302
Alphaproteobacteria
CCC
Gly
>SRA1002188
SRR001308.294589
339432
Alphaproteobacteria
GTT
Asn
>SRA1001849
SRR001308.89703
345454
Alphaproteobacteria
GGT
Thr
>SRA1002092
SRR001308.236176
167926
Alphaproteobacteria
CAT
Met
>SRA1002156
SRR001308.275593
237196
Alphaproteobacteria
CGT
Thr
>SRA1001729
SRR001308.20491
62052
Alphaproteobacteria
GAG
Leu
>SRA1002055
SRR001308.215553
62052
Alphaproteobacteria
GAG
Leu
>SRA1002011
SRR001308.183845
339609
Alphaproteobacteria
GGT
Thr
>SRA1002214
SRR001308.307791
339465
Alphaproteobacteria
GGT
Thr
>SRA1001752
SRR001308.31988
254294
Alphaproteobacteria
>SRA1001935
SRR001308.139830
254294
Alphaproteobacteria
>SRA1001949
SRR001308.144244
254294
Alphaproteobacteria
>SRA1001979
SRR001308.161963
254294
Alphaproteobacteria
>SRA1002276
SRR001308.343557
254294
Alphaproteobacteria
>SRA1002260
SRR001308.331715
96188
Alphaproteobacteria
CAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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