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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
32 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170553386
CXWK01016688
482902
Alphaproteobacteria
TCC
Gly
>WENV170554417
CXWK01068264
320067
Alphaproteobacteria
CGC
Ala
>WENV170553264
CXWK01012896
337513
Alphaproteobacteria
TGT
Thr
>WENV170553112
CXWK01008024
375285
Alphaproteobacteria
TAC
Val
>WENV170553113
CXWK01008024
183975
Alphaproteobacteria
GTC
Asp
>WENV170553138
CXWK01008817
6092
Alphaproteobacteria
GCT
Ser
>WENV170552579
CXWK01000469
192328
Alphaproteobacteria
ACG
Arg
>WENV170553120
CXWK01008356
192247
Alphaproteobacteria
GTG
His
>WENV170552562
CXWK01000402
509917
Alphaproteobacteria
TCC
Gly
>WENV170553963
CXWK01040070
376770
Alphaproteobacteria
CGC
Ala
>WENV170553382
CXWK01016596
282748
Alphaproteobacteria
CGT
Thr
>WENV170553946
CXWK01038962
282748
Alphaproteobacteria
CGT
Thr
>WENV170553114
CXWK01008154
178646
Alphaproteobacteria
TCT
Arg
>WENV170554270
CXWK01058101
399879
Alphaproteobacteria
GTT
Asn
>WENV170553860
CXWK01034890
480412
Alphaproteobacteria
GCA
Cys
>WENV170553289
CXWK01013554
436046
Alphaproteobacteria
GAC
Val
>WENV170554218
CXWK01054361
209311
Alphaproteobacteria
ACG
Arg
>WENV170552985
CXWK01004875
368481
Alphaproteobacteria
TGC
Ala
>WENV170553027
CXWK01005847
178240
Alphaproteobacteria
GTC
Asp
>WENV170554457
CXWK01071299
178240
Alphaproteobacteria
GTC
Asp
>WENV170552874
CXWK01003101
283022
Alphaproteobacteria
CTT
Lys
>WENV170552695
CXWK01001023
176490
Alphaproteobacteria
CAT
Met
>WENV170553557
CXWK01022854
119321
Alphaproteobacteria
GTA
Tyr
>WENV170552790
CXWK01002048
334158
Alphaproteobacteria
CTT
Lys
>WENV170553155
CXWK01009287
413432
Alphaproteobacteria
GGT
Thr
>WENV170553904
CXWK01037222
118145
Alphaproteobacteria
TAG
Leu
>WENV170552873
CXWK01003033
284686
Alphaproteobacteria
TTC
Glu
>WENV170554714
CXWK01086932
180027
Alphaproteobacteria
CAT
Met
>WENV170553606
CXWK01025226
406705
Alphaproteobacteria
GAC
Val
>WENV170552708
CXWK01001172
406705
Alphaproteobacteria
GAC
Val
>WENV170554020
CXWK01042840
338616
Alphaproteobacteria
TGC
Ala
>WENV170553312
CXWK01014403
406748
Alphaproteobacteria
TAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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