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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
99 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170563438
CZCB01018115
281299
Bacillota
TTT
Lys
>WENV170563207
CZCB01011987
281596
Bacillota
TAC
Val
>WENV170562531
CZCB01003376
306648
Bacillota
GTT
Asn
>WENV170562551
CZCB01003539
306648
Bacillota
GTT
Asn
>WENV170562750
CZCB01005039
306648
Bacillota
GTT
Asn
>WENV170563532
CZCB01020781
306648
Bacillota
GTT
Asn
>WENV170563745
CZCB01028218
306648
Bacillota
GTT
Asn
>WENV170562269
CZCB01001702
288760
Bacillota
GGT
Thr
>WENV170563759
CZCB01028451
420421
Bacillota
TTC
Glu
>WENV170562586
CZCB01003696
291579
Bacillota
GAA
Phe
>WENV170562294
CZCB01002003
291579
Bacillota
GAA
Phe
>WENV170562241
CZCB01001541
291579
Bacillota
GAA
Phe
>WENV170562874
CZCB01006508
402928
Bacillota
GCC
Gly
>WENV170562694
CZCB01004657
402928
Bacillota
GCC
Gly
>WENV170562587
CZCB01003696
402928
Bacillota
GCC
Gly
>WENV170562242
CZCB01001541
402928
Bacillota
GCC
Gly
>WENV170561797
CZCB01000072
402928
Bacillota
GCC
Gly
>WENV170563040
CZCB01009140
288079
Bacillota
CGG
Pro
>WENV170562144
CZCB01001082
182996
Bacillota
ACG
Arg
>WENV170563899
CZCB01034859
281017
Bacillota
GAA
Phe
>WENV170563160
CZCB01011021
178666
Bacillota
GAT
Ile
>WENV170563052
CZCB01009214
300936
Bacillota
TGC
Ala
>WENV170562467
CZCB01002978
399246
Bacillota
GCC
Gly
>WENV170562557
CZCB01003555
314780
Bacillota
TGT
Thr
>WENV170562879
CZCB01006578
296941
Bacillota
TGC
Ala
>WENV170562166
CZCB01001230
296941
Bacillota
TGC
Ala
>WENV170562256
CZCB01001676
184120
Bacillota
ACG
Arg
>WENV170563533
CZCB01020781
179661
Bacillota
CAT
Met
>WENV170563260
CZCB01012801
179661
Bacillota
CAT
Met
>WENV170562552
CZCB01003539
179661
Bacillota
CAT
Met
>WENV170562532
CZCB01003376
179661
Bacillota
CAT
Met
>WENV170562527
CZCB01003330
179661
Bacillota
CAT
Met
>WENV170562066
CZCB01000792
179661
Bacillota
CAT
Met
>WENV170561845
CZCB01000223
179661
Bacillota
CAT
Met
>WENV170562425
CZCB01002710
295166
Bacillota
TGC
Ala
>WENV170562182
CZCB01001319
195149
Bacillota
GTC
Asp
>WENV170562249
CZCB01001558
195149
Bacillota
GTC
Asp
>WENV170562096
CZCB01000878
288764
Bacillota
CCA
Trp
>WENV170563760
CZCB01028451
284476
Bacillota
TGT
Thr
>WENV170562525
CZCB01003307
399152
Bacillota
GCC
Gly
>WENV170562563
CZCB01003571
399152
Bacillota
GCC
Gly
>WENV170563567
CZCB01021575
200848
Bacillota
CAT
Met
>WENV170562878
CZCB01006578
195337
Bacillota
GAT
Ile
>WENV170563541
CZCB01020959
288020
Bacillota
TTG
Gln
>WENV170563959
CZCB01039237
288020
Bacillota
TTG
Gln
>WENV170562495
CZCB01003209
195824
Bacillota
GAT
Ile
>WENV170564067
CZCB01045941
289282
Bacillota
TGG
Pro
>WENV170564069
CZCB01046010
289282
Bacillota
TGG
Pro
>WENV170563606
CZCB01022759
207078
Bacillota
GAT
Ile
>WENV170563070
CZCB01009623
314834
Bacillota
TGC
Ala
>WENV170562140
CZCB01001076
287736
Bacillota
TAC
Val
>WENV170562214
CZCB01001430
287736
Bacillota
TAC
Val
>WENV170563521
CZCB01020435
287736
Bacillota
TAC
Val
>WENV170563758
CZCB01028451
400963
Bacillota
GTT
Asn
>WENV170562498
CZCB01003215
283218
Bacillota
TGT
Thr
>WENV170562539
CZCB01003470
283218
Bacillota
TGT
Thr
>WENV170562184
CZCB01001319
407858
Bacillota
GCC
Gly
>WENV170562078
CZCB01000805
407858
Bacillota
GCC
Gly
>WENV170562046
CZCB01000682
407858
Bacillota
GCC
Gly
>WENV170562041
CZCB01000682
407858
Bacillota
GCC
Gly
>WENV170562710
CZCB01004783
46655
Bacillota
TGA
Ser
>WENV170563826
CZCB01031002
287322
Bacillota
TAC
Val
>WENV170562020
CZCB01000644
287322
Bacillota
TAC
Val
>WENV170563342
CZCB01015489
288708
Bacillota
CAT
Met
>WENV170562609
CZCB01003892
287635
Bacillota
TAC
Val
>WENV170562290
CZCB01002003
287635
Bacillota
TAC
Val
>WENV170562197
CZCB01001400
287635
Bacillota
TAC
Val
>WENV170563028
CZCB01008975
280643
Bacillota
TTT
Lys
>WENV170562913
CZCB01007222
402798
Bacillota
TTC
Glu
>WENV170563774
CZCB01028926
301804
Bacillota
GGT
Thr
>WENV170562796
CZCB01005410
314803
Bacillota
GGC
Ala
>WENV170563176
CZCB01011405
415504
Bacillota
TTC
Glu
>WENV170562894
CZCB01006787
415504
Bacillota
TTC
Glu
>WENV170562083
CZCB01000805
415504
Bacillota
TTC
Glu
>WENV170562751
CZCB01005043
314749
Bacillota
CCA
Trp
>WENV170562213
CZCB01001430
314749
Bacillota
CCA
Trp
>WENV170562424
CZCB01002710
183879
Bacillota
GAT
Ile
>WENV170562378
CZCB01002356
411059
Bacillota
GCC
Gly
>WENV170562579
CZCB01003685
411059
Bacillota
GCC
Gly
>WENV170563498
CZCB01020089
411059
Bacillota
GCC
Gly
>WENV170563497
CZCB01020089
314878
Bacillota
GAA
Phe
>WENV170563436
CZCB01018115
180785
Bacillota
TCT
Arg
>WENV170562657
CZCB01004238
300569
Bacillota
TGC
Ala
>WENV170562965
CZCB01008152
482441
Bacillota
TCC
Gly
>WENV170562354
CZCB01002266
402883
Bacillota
GCC
Gly
>WENV170562005
CZCB01000575
402883
Bacillota
GCC
Gly
>WENV170561890
CZCB01000304
402883
Bacillota
GCC
Gly
>WENV170564077
CZCB01046526
207121
Bacillota
GAC
Val
>WENV170562225
CZCB01001440
301494
Bacillota
TTT
Lys
>WENV170562912
CZCB01007222
301494
Bacillota
TTT
Lys
>WENV170563006
CZCB01008631
301494
Bacillota
TTT
Lys
>WENV170563861
CZCB01032758
301494
Bacillota
TTT
Lys
>WENV170563053
CZCB01009215
281271
Bacillota
TGC
Ala
>WENV170563715
CZCB01026240
281271
Bacillota
TGC
Ala
>WENV170564033
CZCB01043879
298260
Bacillota
GTT
Asn
>WENV170563393
CZCB01016912
298260
Bacillota
GTT
Asn
>WENV170563801
CZCB01030209
179645
Bacillota
GTC
Asp
>WENV170562859
CZCB01006235
182676
Bacillota
CAT
Met
>WENV170564071
CZCB01046089
179166
Bacillota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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