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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
166 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170820204
MDSY01000391
176544
Gammaproteobacteria
CAT
Met
>WENV170820302
MDSY01002040
398899
Gammaproteobacteria
TTG
Gln
>WENV170820336
MDSY01002898
481678
Gammaproteobacteria
GCA
Cys
>WENV170820337
MDSY01002898
73504
Gammaproteobacteria
TAA
Leu
>WENV170820411
MDSY01004256
180718
Gammaproteobacteria
CAT
Met
>WENV170820413
MDSY01004256
401883
Gammaproteobacteria
TTG
Gln
>WENV170820492
MDSY01005666
181277
Gammaproteobacteria
ACG
Arg
>WENV170820541
MDSY01006467
283225
Gammaproteobacteria
TGT
Thr
>WENV170820583
MDSY01007077
178166
Gammaproteobacteria
TGG
Pro
>WENV170820585
MDSY01007077
281283
Gammaproteobacteria
GTG
His
>WENV170820655
MDSY01008187
176545
Gammaproteobacteria
CAT
Met
>WENV170820681
MDSY01008778
179138
Gammaproteobacteria
CAT
Met
>WENV170820882
MDSY01013299
73863
Gammaproteobacteria
CAG
Leu
>WENV170820931
MDSY01013777
281438
Gammaproteobacteria
GGC
Ala
>WENV170820951
MDSY01013946
282902
Gammaproteobacteria
TGT
Thr
>WENV170820953
MDSY01013946
481325
Gammaproteobacteria
TCC
Gly
>WENV170821018
MDSY01014938
181365
Gammaproteobacteria
CAT
Met
>WENV170821076
MDSY01015826
181277
Gammaproteobacteria
ACG
Arg
>WENV170821082
MDSY01015919
74115
Gammaproteobacteria
CAG
Leu
>WENV170821083
MDSY01015919
73828
Gammaproteobacteria
CAG
Leu
>WENV170821085
MDSY01015919
74115
Gammaproteobacteria
CAG
Leu
>WENV170821163
MDSY01017141
180680
Gammaproteobacteria
GAC
Val
>WENV170821240
MDSY01018505
46836
Gammaproteobacteria
TAA
Leu
>WENV170821336
MDSY01020504
118413
Gammaproteobacteria
TAG
Leu
>WENV170821380
MDSY01021309
73504
Gammaproteobacteria
TAA
Leu
>WENV170821414
MDSY01021928
281440
Gammaproteobacteria
TGT
Thr
>WENV170821415
MDSY01021928
140806
Gammaproteobacteria
GTA
Tyr
>WENV170821416
MDSY01021928
480549
Gammaproteobacteria
TCC
Gly
>WENV170821417
MDSY01021928
399353
Gammaproteobacteria
GGT
Thr
>WENV170821551
MDSY01023883
177028
Gammaproteobacteria
CAT
Met
>WENV170821608
MDSY01024915
178006
Gammaproteobacteria
GGG
Pro
>WENV170821649
MDSY01025691
20664
Gammaproteobacteria
GCT
Ser
>WENV170821693
MDSY01026254
283486
Gammaproteobacteria
TGT
Thr
>WENV170821952
MDSY01031271
73146
Gammaproteobacteria
TAA
Leu
>WENV170821963
MDSY01031524
284022
Gammaproteobacteria
TGT
Thr
>WENV170822087
MDSY01033819
283486
Gammaproteobacteria
TGT
Thr
>WENV170822096
MDSY01034057
181513
Gammaproteobacteria
TGG
Pro
>WENV170822126
MDSY01034345
177028
Gammaproteobacteria
CAT
Met
>WENV170822139
MDSY01034562
180717
Gammaproteobacteria
CCA
Trp
>WENV170822143
MDSY01034638
8667
Gammaproteobacteria
GCT
Ser
>WENV170822144
MDSY01034638
181520
Gammaproteobacteria
ACG
Arg
>WENV170822145
MDSY01034638
181520
Gammaproteobacteria
ACG
Arg
>WENV170822215
MDSY01036295
178471
Gammaproteobacteria
GTT
Asn
>WENV170822230
MDSY01036653
480548
Gammaproteobacteria
GCA
Cys
>WENV170822262
MDSY01037052
480549
Gammaproteobacteria
TCC
Gly
>WENV170822263
MDSY01037052
399353
Gammaproteobacteria
GGT
Thr
>WENV170822277
MDSY01037408
283221
Gammaproteobacteria
GCC
Gly
>WENV170822286
MDSY01037566
283486
Gammaproteobacteria
TGT
Thr
>WENV170822445
MDSY01040044
281437
Gammaproteobacteria
CCA
Trp
>WENV170822488
MDSY01041291
177028
Gammaproteobacteria
CAT
Met
>WENV170822518
MDSY01041628
180680
Gammaproteobacteria
GAC
Val
>WENV170822738
MDSY01045495
20407
Gammaproteobacteria
TGA
Ser
>WENV170822790
MDSY01046421
481314
Gammaproteobacteria
GCA
Cys
>WENV170822862
MDSY01047835
56694
Gammaproteobacteria
GGA
Ser
>WENV170822908
MDSY01048568
178169
Gammaproteobacteria
GAC
Val
>WENV170822948
MDSY01048960
402281
Gammaproteobacteria
GCC
Gly
>WENV170822959
MDSY01049262
73830
Gammaproteobacteria
CAA
Leu
>WENV170822981
MDSY01049622
400184
Gammaproteobacteria
>WENV170823016
MDSY01050060
282902
Gammaproteobacteria
TGT
Thr
>WENV170823100
MDSY01051573
178540
Gammaproteobacteria
TGG
Pro
>WENV170823121
MDSY01051742
284865
Gammaproteobacteria
>WENV170823263
MDSY01054262
281432
Gammaproteobacteria
TTG
Gln
>WENV170823264
MDSY01054262
281432
Gammaproteobacteria
TTG
Gln
>WENV170823283
MDSY01054625
480516
Gammaproteobacteria
GCA
Cys
>WENV170823367
MDSY01056274
286623
Gammaproteobacteria
GTT
Asn
>WENV170823398
MDSY01056919
74240
Gammaproteobacteria
CAA
Leu
>WENV170823416
MDSY01057304
283521
Gammaproteobacteria
GAA
Phe
>WENV170823430
MDSY01057392
282684
Gammaproteobacteria
TTC
Glu
>WENV170823474
MDSY01058311
176520
Gammaproteobacteria
CAT
Met
>WENV170823521
MDSY01059115
281439
Gammaproteobacteria
GAA
Phe
>WENV170823525
MDSY01059266
401696
Gammaproteobacteria
TTG
Gln
>WENV170823650
MDSY01061348
280915
Gammaproteobacteria
CCA
Trp
>WENV170823723
MDSY01062663
282922
Gammaproteobacteria
GAA
Phe
>WENV170823724
MDSY01062663
400928
Gammaproteobacteria
>WENV170823726
MDSY01062663
282922
Gammaproteobacteria
GAA
Phe
>WENV170823727
MDSY01062663
400928
Gammaproteobacteria
>WENV170823925
MDSY01066826
179888
Gammaproteobacteria
ACG
Arg
>WENV170823955
MDSY01067385
176665
Gammaproteobacteria
CGG
Pro
>WENV170823982
MDSY01067932
282682
Gammaproteobacteria
GTT
Asn
>WENV170823983
MDSY01067932
282682
Gammaproteobacteria
GTT
Asn
>WENV170823995
MDSY01068165
282687
Gammaproteobacteria
GCC
Gly
>WENV170824081
MDSY01069364
176069
Gammaproteobacteria
TCT
Arg
>WENV170824082
MDSY01069364
286691
Gammaproteobacteria
GTG
His
>WENV170824126
MDSY01070016
178175
Gammaproteobacteria
ACG
Arg
>WENV170824385
MDSY01074861
481325
Gammaproteobacteria
TCC
Gly
>WENV170824454
MDSY01076285
284044
Gammaproteobacteria
TTC
Glu
>WENV170824497
MDSY01077175
281441
Gammaproteobacteria
CCT
Arg
>WENV170824537
MDSY01077662
180681
Gammaproteobacteria
TGG
Pro
>WENV170824557
MDSY01077997
281434
Gammaproteobacteria
GTT
Asn
>WENV170824700
MDSY01080632
280915
Gammaproteobacteria
CCA
Trp
>WENV170824827
MDSY01082968
176796
Gammaproteobacteria
GGG
Pro
>WENV170824835
MDSY01083157
141058
Gammaproteobacteria
GTA
Tyr
>WENV170824873
MDSY01083714
281939
Gammaproteobacteria
TTT
Lys
>WENV170824903
MDSY01083912
178471
Gammaproteobacteria
GTT
Asn
>WENV170824904
MDSY01083912
178471
Gammaproteobacteria
GTT
Asn
>WENV170825056
MDSY01086838
283486
Gammaproteobacteria
TGT
Thr
>WENV170825061
MDSY01086934
73067
Gammaproteobacteria
CAG
Leu
>WENV170825106
MDSY01087489
282683
Gammaproteobacteria
GGC
Ala
>WENV170825107
MDSY01087489
282684
Gammaproteobacteria
TTC
Glu
>WENV170825162
MDSY01088310
283486
Gammaproteobacteria
TGT
Thr
>WENV170825257
MDSY01089736
118920
Gammaproteobacteria
TAG
Leu
>WENV170825292
MDSY01090390
284706
Gammaproteobacteria
GTT
Asn
>WENV170825468
MDSY01093482
178471
Gammaproteobacteria
GTT
Asn
>WENV170825525
MDSY01094351
178164
Gammaproteobacteria
GAT
Ile
>WENV170825643
MDSY01096973
283486
Gammaproteobacteria
TGT
Thr
>WENV170825649
MDSY01097141
283486
Gammaproteobacteria
TGT
Thr
>WENV170825687
MDSY01097927
176795
Gammaproteobacteria
CAT
Met
>WENV170825695
MDSY01098099
180679
Gammaproteobacteria
CCA
Trp
>WENV170825711
MDSY01098521
29399
Gammaproteobacteria
GGA
Ser
>WENV170825860
MDSY01101074
176796
Gammaproteobacteria
GGG
Pro
>WENV170825869
MDSY01101345
73544
Gammaproteobacteria
TAA
Leu
>WENV170825884
MDSY01101667
480941
Gammaproteobacteria
TCC
Gly
>WENV170825905
MDSY01102024
29695
Gammaproteobacteria
GGA
Ser
>WENV170825999
MDSY01103756
480516
Gammaproteobacteria
GCA
Cys
>WENV170826006
MDSY01104001
401696
Gammaproteobacteria
TTG
Gln
>WENV170826078
MDSY01105058
73067
Gammaproteobacteria
CAG
Leu
>WENV170826079
MDSY01105058
73067
Gammaproteobacteria
CAG
Leu
>WENV170826139
MDSY01106169
280915
Gammaproteobacteria
CCA
Trp
>WENV170826200
MDSY01107000
282550
Gammaproteobacteria
TAC
Val
>WENV170826204
MDSY01107014
180053
Gammaproteobacteria
CAT
Met
>WENV170826211
MDSY01107215
285363
Gammaproteobacteria
TGT
Thr
>WENV170826440
MDSY01110837
286980
Gammaproteobacteria
TTT
Lys
>WENV170826444
MDSY01110863
179189
Gammaproteobacteria
CAT
Met
>WENV170826458
MDSY01111098
284022
Gammaproteobacteria
TGT
Thr
>WENV170826465
MDSY01111170
179710
Gammaproteobacteria
GAC
Val
>WENV170826521
MDSY01112045
286980
Gammaproteobacteria
TTT
Lys
>WENV170826589
MDSY01113151
480548
Gammaproteobacteria
GCA
Cys
>WENV170826673
MDSY01114866
30083
Gammaproteobacteria
GCT
Ser
>WENV170826674
MDSY01114866
176790
Gammaproteobacteria
ACG
Arg
>WENV170826676
MDSY01114925
282894
Gammaproteobacteria
GAA
Phe
>WENV170826766
MDSY01116426
481678
Gammaproteobacteria
GCA
Cys
>WENV170826796
MDSY01116920
20664
Gammaproteobacteria
GCT
Ser
>WENV170826952
MDSY01119947
287037
Gammaproteobacteria
GTG
His
>WENV170827003
MDSY01120991
284039
Gammaproteobacteria
TTC
Glu
>WENV170827085
MDSY01122727
180679
Gammaproteobacteria
CCA
Trp
>WENV170827145
MDSY01123708
287057
Gammaproteobacteria
GAA
Phe
>WENV170827150
MDSY01123804
178471
Gammaproteobacteria
GTT
Asn
>WENV170827254
MDSY01125413
141076
Gammaproteobacteria
GTA
Tyr
>WENV170827255
MDSY01125413
480941
Gammaproteobacteria
TCC
Gly
>WENV170827279
MDSY01125814
74339
Gammaproteobacteria
GAG
Leu
>WENV170827284
MDSY01125858
399352
Gammaproteobacteria
GCC
Gly
>WENV170827299
MDSY01126365
284706
Gammaproteobacteria
GTT
Asn
>WENV170827357
MDSY01127692
281229
Gammaproteobacteria
GTT
Asn
>WENV170827435
MDSY01128904
402281
Gammaproteobacteria
GCC
Gly
>WENV170827522
MDSY01130780
282689
Gammaproteobacteria
GAA
Phe
>WENV170827532
MDSY01131040
178471
Gammaproteobacteria
GTT
Asn
>WENV170827781
MDSY01136089
73504
Gammaproteobacteria
TAA
Leu
>WENV170827785
MDSY01136188
74048
Gammaproteobacteria
CAA
Leu
>WENV170827813
MDSY01136769
179888
Gammaproteobacteria
ACG
Arg
>WENV170827838
MDSY01137326
284693
Gammaproteobacteria
TTC
Glu
>WENV170827882
MDSY01138295
284706
Gammaproteobacteria
GTT
Asn
>WENV170827897
MDSY01138592
176791
Gammaproteobacteria
TGG
Pro
>WENV170827980
MDSY01140305
179710
Gammaproteobacteria
GAC
Val
>WENV170828082
MDSY01142359
284865
Gammaproteobacteria
>WENV170828142
MDSY01143745
178543
Gammaproteobacteria
GGG
Pro
>WENV170828250
MDSY01145960
287168
Gammaproteobacteria
TAC
Val
>WENV170828335
MDSY01147711
281435
Gammaproteobacteria
TTT
Lys
>WENV170828367
MDSY01148458
480516
Gammaproteobacteria
GCA
Cys
>WENV170828410
MDSY01149453
20664
Gammaproteobacteria
GCT
Ser
>WENV170828566
MDSY01152073
282902
Gammaproteobacteria
TGT
Thr
>WENV170828567
MDSY01152073
140925
Gammaproteobacteria
GTA
Tyr
>WENV170828568
MDSY01152073
481325
Gammaproteobacteria
TCC
Gly
>WENV170828583
MDSY01152256
20620
Gammaproteobacteria
TGA
Ser
>WENV170828654
MDSY01153999
402281
Gammaproteobacteria
GCC
Gly
>WENV170828872
MDSY01157126
178025
Gammaproteobacteria
GAC
Val
>WENV170828883
MDSY01157244
400373
Gammaproteobacteria
CCG
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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