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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
216 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180339238
OBLI01003028
179252
Bacillota
CGG
Pro
>WENV180341878
OBLI01258352
100469
Bacillota
GTA
Tyr
>WENV180339160
OBLI01002521
118683
Bacillota
GTA
Tyr
>WENV180339772
OBLI01007972
118683
Bacillota
GTA
Tyr
>WENV180341533
OBLI01151169
99852
Bacillota
GTA
Tyr
>WENV180341964
OBLI01313918
212982
Bacillota
ACG
Arg
>WENV180342097
OBLI01448621
303627
Bacillota
GAA
Phe
>WENV180341973
OBLI01319624
343590
Bacillota
GCC
Gly
>WENV180340303
OBLI01019937
343590
Bacillota
GCC
Gly
>WENV180341932
OBLI01287383
356775
Bacillota
TGT
Thr
>WENV180341306
OBLI01108790
234991
Bacillota
GAT
Ile
>WENV180341259
OBLI01101368
234991
Bacillota
GAT
Ile
>WENV180340857
OBLI01050444
234991
Bacillota
GAT
Ile
>WENV180341338
OBLI01111532
280500
Bacillota
TGC
Ala
>WENV180340912
OBLI01056138
280500
Bacillota
TGC
Ala
>WENV180339930
OBLI01010115
349107
Bacillota
GCC
Gly
>WENV180338400
OBLI01000291
289472
Bacillota
TTC
Glu
>WENV180339397
OBLI01003932
20615
Bacillota
CGA
Ser
>WENV180340935
OBLI01057574
280428
Bacillota
GAA
Phe
>WENV180339929
OBLI01010115
280428
Bacillota
GAA
Phe
>WENV180339076
OBLI01002064
356660
Bacillota
CTT
Lys
>WENV180341986
OBLI01333393
183994
Bacillota
TCT
Arg
>WENV180339429
OBLI01004360
231532
Bacillota
ACG
Arg
>WENV180338695
OBLI01000842
231532
Bacillota
ACG
Arg
>WENV180339966
OBLI01010570
175842
Bacillota
CAC
Val
>WENV180340650
OBLI01034600
236579
Bacillota
GAT
Ile
>WENV180340557
OBLI01029845
323166
Bacillota
TAC
Val
>WENV180338423
OBLI01000325
348419
Bacillota
GTT
Asn
>WENV180338065
OBLI01000008
184497
Bacillota
GGG
Pro
>WENV180339769
OBLI01007972
400140
Bacillota
TTC
Glu
>WENV180341918
OBLI01279123
4796
Bacillota
GGA
Ser
>WENV180341997
OBLI01339624
179563
Bacillota
GAT
Ile
>WENV180339083
OBLI01002084
179176
Bacillota
ACG
Arg
>WENV180339428
OBLI01004360
289474
Bacillota
CCA
Trp
>WENV180338639
OBLI01000745
184687
Bacillota
CAT
Met
>WENV180339534
OBLI01005572
101000
Bacillota
GTA
Tyr
>WENV180341305
OBLI01108790
295166
Bacillota
TGC
Ala
>WENV180341258
OBLI01101368
295166
Bacillota
TGC
Ala
>WENV180340856
OBLI01050444
295166
Bacillota
TGC
Ala
>WENV180338377
OBLI01000266
295166
Bacillota
TGC
Ala
>WENV180341927
OBLI01281655
141334
Bacillota
TAG
Leu
>WENV180341975
OBLI01321910
141334
Bacillota
TAG
Leu
>WENV180341037
OBLI01069836
215243
Bacillota
CAT
Met
>WENV180338918
OBLI01001413
184522
Bacillota
CCT
Arg
>WENV180339222
OBLI01002916
285537
Bacillota
CCT
Arg
>WENV180340222
OBLI01018272
11172
Bacillota
TGA
Ser
>WENV180341231
OBLI01097107
399153
Bacillota
TTC
Glu
>WENV180342121
OBLI01455552
73664
Bacillota
CAG
Leu
>WENV180339248
OBLI01003130
73664
Bacillota
CAG
Leu
>WENV180338989
OBLI01001642
73664
Bacillota
CAG
Leu
>WENV180338473
OBLI01000421
73664
Bacillota
CAG
Leu
>WENV180339196
OBLI01002717
280447
Bacillota
GAC
Val
>WENV180338963
OBLI01001598
280447
Bacillota
GAC
Val
>WENV180340232
OBLI01018323
409321
Bacillota
TTC
Glu
>WENV180339171
OBLI01002577
409321
Bacillota
TTC
Glu
>WENV180339465
OBLI01004709
5692
Bacillota
GCT
Ser
>WENV180338838
OBLI01001174
47207
Bacillota
TGA
Ser
>WENV180341798
OBLI01229941
186123
Bacillota
GTC
Asp
>WENV180340345
OBLI01021203
186123
Bacillota
GTC
Asp
>WENV180339578
OBLI01005835
186123
Bacillota
GTC
Asp
>WENV180339544
OBLI01005603
186123
Bacillota
GTC
Asp
>WENV180338569
OBLI01000627
186123
Bacillota
GTC
Asp
>WENV180338310
OBLI01000198
186123
Bacillota
GTC
Asp
>WENV180341125
OBLI01081647
175825
Bacillota
GAT
Ile
>WENV180340443
OBLI01024371
175825
Bacillota
GAT
Ile
>WENV180340162
OBLI01015708
180668
Bacillota
TCT
Arg
>WENV180339504
OBLI01005104
284723
Bacillota
TAC
Val
>WENV180339734
OBLI01007495
73009
Bacillota
CAG
Leu
>WENV180341837
OBLI01245483
46830
Bacillota
TAA
Leu
>WENV180339145
OBLI01002467
280708
Bacillota
TAC
Val
>WENV180339351
OBLI01003674
280708
Bacillota
TAC
Val
>WENV180339830
OBLI01008787
180666
Bacillota
GGT
Thr
>WENV180341256
OBLI01100136
280646
Bacillota
TGC
Ala
>WENV180340236
OBLI01018323
338033
Bacillota
GAA
Phe
>WENV180338687
OBLI01000830
338033
Bacillota
GAA
Phe
>WENV180338406
OBLI01000300
338033
Bacillota
GAA
Phe
>WENV180342038
OBLI01376302
189473
Bacillota
GAT
Ile
>WENV180340504
OBLI01027413
189473
Bacillota
GAT
Ile
>WENV180339537
OBLI01005572
183993
Bacillota
CAT
Met
>WENV180340195
OBLI01017229
291581
Bacillota
CGG
Pro
>WENV180340279
OBLI01019417
175859
Bacillota
TCT
Arg
>WENV180342117
OBLI01453074
280436
Bacillota
TGC
Ala
>WENV180339004
OBLI01001723
481153
Bacillota
CCC
Gly
>WENV180339536
OBLI01005572
289149
Bacillota
GGT
Thr
>WENV180340515
OBLI01027711
175831
Bacillota
ACG
Arg
>WENV180342073
OBLI01413933
487004
Bacillota
TCC
Gly
>WENV180339261
OBLI01003195
47166
Bacillota
CGA
Ser
>WENV180340275
OBLI01019369
179810
Bacillota
TCT
Arg
>WENV180339928
OBLI01010047
74045
Bacillota
CAG
Leu
>WENV180341838
OBLI01245483
179130
Bacillota
ACG
Arg
>WENV180339847
OBLI01009103
402739
Bacillota
CCG
Arg
>WENV180339169
OBLI01002574
402739
Bacillota
CCG
Arg
>WENV180338397
OBLI01000291
289147
Bacillota
GTT
Asn
>WENV180339335
OBLI01003616
289475
Bacillota
GTG
His
>WENV180341799
OBLI01229941
291634
Bacillota
GAA
Phe
>WENV180340346
OBLI01021203
291634
Bacillota
GAA
Phe
>WENV180339579
OBLI01005835
291634
Bacillota
GAA
Phe
>WENV180338570
OBLI01000627
291634
Bacillota
GAA
Phe
>WENV180340200
OBLI01017281
241041
Bacillota
CGG
Pro
>WENV180339926
OBLI01010009
241041
Bacillota
CGG
Pro
>WENV180341953
OBLI01305711
399041
Bacillota
CCA
Trp
>WENV180339250
OBLI01003134
346451
Bacillota
TTT
Lys
>WENV180341909
OBLI01274383
179706
Bacillota
CAT
Met
>WENV180341788
OBLI01227173
401837
Bacillota
TTC
Glu
>WENV180340343
OBLI01021162
20913
Bacillota
GCT
Ser
>WENV180338136
OBLI01000050
484885
Bacillota
TCC
Gly
>WENV180340194
OBLI01017229
480322
Bacillota
CTG
Gln
>WENV180341963
OBLI01313917
401685
Bacillota
TTG
Gln
>WENV180339863
OBLI01009181
401685
Bacillota
TTG
Gln
>WENV180340078
OBLI01013597
175868
Bacillota
GTT
Asn
>WENV180340020
OBLI01012096
175868
Bacillota
GTT
Asn
>WENV180339973
OBLI01010844
184455
Bacillota
GTC
Asp
>WENV180338590
OBLI01000666
184455
Bacillota
GTC
Asp
>WENV180338819
OBLI01001118
289476
Bacillota
CGT
Thr
>WENV180341225
OBLI01096251
322848
Bacillota
CTT
Lys
>WENV180338594
OBLI01000666
48832
Bacillota
TAA
Leu
>WENV180341224
OBLI01096251
398854
Bacillota
CTC
Glu
>WENV180340019
OBLI01012096
398854
Bacillota
CTC
Glu
>WENV180340088
OBLI01013746
291576
Bacillota
CCC
Gly
>WENV180340007
OBLI01011784
480324
Bacillota
TTG
Gln
>WENV180341351
OBLI01113861
497729
Bacillota
CCA
Trp
>WENV180339010
OBLI01001780
497729
Bacillota
CCA
Trp
>WENV180338401
OBLI01000291
292612
Bacillota
TAC
Val
>WENV180341126
OBLI01081744
175899
Bacillota
GTC
Asp
>WENV180341627
OBLI01181200
303718
Bacillota
TGT
Thr
>WENV180340092
OBLI01013759
303718
Bacillota
TGT
Thr
>WENV180339506
OBLI01005115
303718
Bacillota
TGT
Thr
>WENV180341176
OBLI01087681
56079
Bacillota
AAG
Leu
>WENV180338398
OBLI01000291
403952
Bacillota
CTG
Gln
>WENV180341139
OBLI01083505
484479
Bacillota
GCA
Cys
>WENV180338592
OBLI01000666
404126
Bacillota
GCC
Gly
>WENV180338396
OBLI01000291
404126
Bacillota
GCC
Gly
>WENV180340235
OBLI01018323
179935
Bacillota
GTC
Asp
>WENV180338686
OBLI01000830
179935
Bacillota
GTC
Asp
>WENV180338405
OBLI01000300
179935
Bacillota
GTC
Asp
>WENV180338187
OBLI01000076
179935
Bacillota
GTC
Asp
>WENV180341464
OBLI01134070
186051
Bacillota
GAT
Ile
>WENV180341364
OBLI01116252
186051
Bacillota
GAT
Ile
>WENV180341313
OBLI01109341
186051
Bacillota
GAT
Ile
>WENV180340944
OBLI01058746
186051
Bacillota
GAT
Ile
>WENV180338427
OBLI01000325
398857
Bacillota
TTC
Glu
>WENV180338425
OBLI01000325
398857
Bacillota
TTC
Glu
>WENV180340793
OBLI01045753
204381
Bacillota
GAT
Ile
>WENV180340950
OBLI01059142
117745
Bacillota
GTA
Tyr
>WENV180340813
OBLI01047688
280444
Bacillota
GGT
Thr
>WENV180340143
OBLI01015257
280444
Bacillota
GGT
Thr
>WENV180340720
OBLI01040276
200471
Bacillota
ACG
Arg
>WENV180341926
OBLI01281655
354380
Bacillota
TTT
Lys
>WENV180341936
OBLI01289812
281326
Bacillota
TGC
Ala
>WENV180339974
OBLI01010844
100999
Bacillota
GAG
Leu
>WENV180340297
OBLI01019858
408813
Bacillota
TCG
Arg
>WENV180341079
OBLI01074403
404105
Bacillota
TTG
Gln
>WENV180340207
OBLI01017489
321753
Bacillota
GCC
Gly
>WENV180340032
OBLI01012373
321753
Bacillota
GCC
Gly
>WENV180340201
OBLI01017281
15649
Bacillota
GGA
Ser
>WENV180339927
OBLI01010009
15649
Bacillota
GGA
Ser
>WENV180338399
OBLI01000291
289745
Bacillota
TTT
Lys
>WENV180338634
OBLI01000715
281445
Bacillota
GTG
His
>WENV180338621
OBLI01000692
281445
Bacillota
GTG
His
>WENV180341399
OBLI01121236
223045
Bacillota
GAT
Ile
>WENV180341872
OBLI01256163
179755
Bacillota
CCG
Arg
>WENV180339540
OBLI01005591
179755
Bacillota
CCG
Arg
>WENV180339393
OBLI01003903
179755
Bacillota
CCG
Arg
>WENV180340485
OBLI01026375
58120
Bacillota
AAG
Leu
>WENV180341706
OBLI01202051
46835
Bacillota
TAA
Leu
>WENV180340489
OBLI01026567
398832
Bacillota
TTC
Glu
>WENV180341750
OBLI01215951
118669
Bacillota
GTA
Tyr
>WENV180341743
OBLI01214330
118669
Bacillota
GTA
Tyr
>WENV180338209
OBLI01000086
118669
Bacillota
GTA
Tyr
>WENV180342137
OBLI01468056
175915
Bacillota
GTC
Asp
>WENV180341458
OBLI01132111
332651
Bacillota
GTT
Asn
>WENV180340383
OBLI01022203
280462
Bacillota
GAA
Phe
>WENV180339768
OBLI01007972
8724
Bacillota
GCT
Ser
>WENV180340837
OBLI01049512
5702
Bacillota
GGA
Ser
>WENV180341354
OBLI01114075
398852
Bacillota
CTC
Glu
>WENV180340921
OBLI01057114
398852
Bacillota
CTC
Glu
>WENV180340512
OBLI01027636
398852
Bacillota
CTC
Glu
>WENV180338900
OBLI01001333
398852
Bacillota
CTC
Glu
>WENV180338899
OBLI01001333
398852
Bacillota
CTC
Glu
>WENV180338362
OBLI01000252
398852
Bacillota
CTC
Glu
>WENV180338361
OBLI01000252
398852
Bacillota
CTC
Glu
>WENV180338360
OBLI01000252
398852
Bacillota
CTC
Glu
>WENV180340299
OBLI01019937
118359
Bacillota
GTA
Tyr
>WENV180338375
OBLI01000266
289123
Bacillota
GGT
Thr
>WENV180341807
OBLI01233437
444984
Bacillota
GCC
Gly
>WENV180341962
OBLI01313881
329074
Bacillota
TGC
Ala
>WENV180341954
OBLI01306533
401880
Bacillota
>WENV180338711
OBLI01000888
321248
Bacillota
TAC
Val
>WENV180338824
OBLI01001126
184539
Bacillota
TCT
Arg
>WENV180338529
OBLI01000514
184539
Bacillota
TCT
Arg
>WENV180342007
OBLI01346300
280483
Bacillota
GAA
Phe
>WENV180340553
OBLI01029684
280483
Bacillota
GAA
Phe
>WENV180340333
OBLI01020734
280483
Bacillota
GAA
Phe
>WENV180341303
OBLI01108595
298260
Bacillota
GTT
Asn
>WENV180339820
OBLI01008731
298260
Bacillota
GTT
Asn
>WENV180339590
OBLI01005977
183995
Bacillota
GGG
Pro
>WENV180340276
OBLI01019369
175857
Bacillota
GTG
His
>WENV180339862
OBLI01009181
175857
Bacillota
GTG
His
>WENV180338460
OBLI01000393
175857
Bacillota
GTG
His
>WENV180340511
OBLI01027506
184523
Bacillota
GAC
Val
>WENV180339336
OBLI01003616
403766
Bacillota
TTG
Gln
>WENV180340812
OBLI01047688
175849
Bacillota
GTC
Asp
>WENV180339931
OBLI01010115
175849
Bacillota
GTC
Asp
>WENV180339871
OBLI01009236
73132
Bacillota
CAG
Leu
>WENV180340715
OBLI01040110
399281
Bacillota
>WENV180338593
OBLI01000666
489283
Bacillota
GCA
Cys
>WENV180340984
OBLI01062113
280486
Bacillota
TGC
Ala
>WENV180340347
OBLI01021203
405393
Bacillota
GCC
Gly
>WENV180339580
OBLI01005835
405393
Bacillota
GCC
Gly
>WENV180339545
OBLI01005603
405393
Bacillota
GCC
Gly
>WENV180338875
OBLI01001266
405393
Bacillota
GCC
Gly
>WENV180338571
OBLI01000627
405393
Bacillota
GCC
Gly
>WENV180338545
OBLI01000563
405393
Bacillota
GCC
Gly
>WENV180338311
OBLI01000198
405393
Bacillota
GCC
Gly
>WENV180341767
OBLI01222559
284680
Bacillota
TTT
Lys
>WENV180339843
OBLI01009008
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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